| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN004M15 | Sequence | 566 | 003635 (8) | ref|XP_004228682.1| | 218 | PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum] | |||||
| JMFN004O17 | Sequence | 624 | 003635 (8) | ref|XP_004228682.1| | 262 | PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum] | |||||
| JMSF016K23 | Sequence | 288 | 003635 (8) | ref|XP_004228682.1| | 48.5 | PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum] | 751 | 003635 (8) | ref|XP_004228682.1| | 345 | PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum] |
| JMSF017K23 | Sequence | 322 | 003635 (8) | ref|XP_004228682.1| | 67.0 | PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum] | 744 | 003635 (8) | ref|XP_004228682.1| | 345 | PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum] |
| JMSF033J11 | Sequence | 596 | 003635 (8) | ref|XP_004228682.1| | 230 | PREDICTED: uncharacterized protein LOC101264357 [Solanum lycopersicum] | 722 | 003635 (8) | ref|XP_009620471.1| | 328 | PREDICTED: uncharacterized protein LOC104112297 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF033J11- AGATAGTTAACATCCCCAAAT
rJMSF016K23- AAT
rJMSF017K23- AAT
____________________________________________________________
consensus AGATAGTTAACATCCCCAAAT
. : . : . : . : . : . :
rJMSF033J11- TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
rJMSF016K23- TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
rJMSF017K23- TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
____________________________________________________________
consensus TGTATACTGGTTAAAGGGTTTTGATGCTAGATATGGATATATACAGAGTGATTCAAATGA
. : . : . : . : . : . :
rJMSF033J11- ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
rJMSF016K23- ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
rJMSF017K23- ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
____________________________________________________________
consensus ACAGTACACACCAAAGAGTTTTAACACAGTGGTTGTTCTTCAAACAGAAGGGCCGGATCT
. : . : . : . : . : . :
rJMSF033J11- CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
rJMSF016K23- CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
rJMSF017K23- CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
____________________________________________________________
consensus CAGGACCCTCTCCACTTTCTCGGCTTTGGTATAGTCGTTTTCTGTTAGAGGTCCAGCAGG
. : . : . : . : . : . :
rJMSF033J11- GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
rJMSF016K23- GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
rJMSF017K23- GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
JMFN004O17+ C
____________________________________________________________
consensus GAAAGGCGTGATCTCTACAATTAGGTGCGGGGTTGGGAGCTCATCGAACAGAGCTCTCAC
. : . : . : . : . : . :
rJMSF033J11- GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
rJMSF016K23- GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
rJMSF017K23- GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
JMFN004M15+ GTG
JMFN004O17+ GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
JMSF033J11+ TTATCTGACAACCCTTGTG
____________________________________________________________
consensus GTTATTGCAACACACGCTTTCTCCGTGAGCACTCTCCCTCCTTATCTGACAACCCTTGTG
. : . : . : . : . : . :
rJMSF033J11- AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
rJMSF016K23- AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
rJMSF017K23- AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
JMFN004M15+ AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
JMFN004O17+ AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
JMSF033J11+ AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
____________________________________________________________
consensus AGAAGTGGCATCTCTAAAATGGTCATCATCTGATAGTAAGGAAGCAACGGCTCTGAGAAG
. : . : . : . : . : . :
rJMSF033J11- GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
rJMSF016K23- GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
rJMSF017K23- GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
JMFN004M15+ GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
JMFN004O17+ GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
JMSF033J11+ GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
____________________________________________________________
consensus GCGTTTCCCTTCAGATTTTGATGGGATCCGGTAATTGCGTCTGAGGGTCCCCTTAGTTGT
. : . : . : . : . : . :
rJMSF033J11- TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
rJMSF016K23- TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
rJMSF017K23- TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
JMFN004M15+ TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
JMFN004O17+ TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
JMSF033J11+ TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
____________________________________________________________
consensus TGGATGCCATTTGCTTACTAATTTCCTTCTGTCAGCAGCTTCCCTATCTGGATTTCTTTT
. : . : . : . : . : . :
rJMSF033J11- GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
rJMSF016K23- GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
rJMSF017K23- GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
JMFN004M15+ GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
JMFN004O17+ GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
JMSF033J11+ GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
____________________________________________________________
consensus GAACTGATCAAACCAATTAGCAAGACCCAAATCATCAGCCTCAGCATTCTCAAAATCTGA
. : . : . : . : . : . :
rJMSF033J11- AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
rJMSF016K23- AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
rJMSF017K23- AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMFN004M15+ AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMFN004O17+ AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMSF033J11+ AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
JMSF017K23+ TGAGGAGGGCATAGAAGATGGC
____________________________________________________________
consensus AAGAATGGGGTTAGAAGGAGATCCAGCCAAGCCAGCTTTGAGGAGGGCATAGAAGATGGC
. : . : . : . : . : . :
rJMSF033J11- AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
rJMSF016K23- AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
rJMSF017K23- AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMFN004M15+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMFN004O17+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMSF033J11+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMSF016K23+ CCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
JMSF017K23+ AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
____________________________________________________________
consensus AACTCTTCCAGCCCACAACACTGGGGTCTCAAACAGAGTGGCCCGAGTTGTTGTTTTGGC
. : . : . : . : . : . :
rJMSF033J11- AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAA
rJMSF016K23- AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
rJMSF017K23- AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMFN004M15+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMFN004O17+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMSF033J11+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMSF016K23+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
JMSF017K23+ AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
____________________________________________________________
consensus AGTAAAAATTGAGGCCTTTCTGGGACTGCTGCCCAAATGAAACCTCAAATCAAGACTGGG
. : . : . : . : . : . :
rJMSF016K23- AAACAAAGACTTTGGCAGCA
rJMSF017K23- AAACAAAGACTTTGGCAGCA
JMFN004M15+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMFN004O17+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMSF033J11+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMSF016K23+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
JMSF017K23+ AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
____________________________________________________________
consensus AAACAAAGACTTTGGCAGCAGAAAAGCAGTGTGATGCTTGAAGCAAGAAGAGGGTAGGGT
. : . : . : . : . : . :
JMFN004M15+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMFN004O17+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMSF033J11+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMSF016K23+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
JMSF017K23+ TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
____________________________________________________________
consensus TTGGATGGCGCTTTGTAGAAGAAGCATTTGGTTTGATTGGATTTCTTCGCAGAATCAAAG
. : . : . : . : . : . :
JMFN004M15+ AAAATAGCGCAGTTTTTTCAGTG
JMFN004O17+ AAAATAGCGCAGTTTTTTCAGTG
JMSF033J11+ AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATT
JMSF016K23+ AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATTAGATCCCTTACAGTTCAGCCAGTC
JMSF017K23+ AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATTAGATCCCTTACAGTTCAGCCAGTC
____________________________________________________________
consensus AAAATAGCGCAGTTTTTTCAGTGTATGAGATAGATTAGATCCCTTACAGTTCAGCCAGTC