| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003I06 | Sequence | 576 | 003632 (5) | gb|EYU28744.1| | 4e-57 | hypothetical protein MIMGU_mgv1a003087mg [Erythranthe guttata] gb|EYU28745.1| hy | 728 | 015887 | gb|ABO93008.1| | 4e-72 | putative methyltransferase [Solanum tuberosum] |
| JMFF017B03 | Sequence | 553 | 003632 (5) | gb|EYU28744.1| | 9e-52 | hypothetical protein MIMGU_mgv1a003087mg [Erythranthe guttata] gb|EYU28745.1| hy | 763 | 011029 (4) | gb|ABO93008.1| | 2e-88 | putative methyltransferase [Solanum tuberosum] |
| JMSF004B03 | Sequence | 290 | 003632 (5) | ||||||||
| JMSF017F05 | Sequence | 572 | 003632 (5) | gb|EYU28744.1| | 7e-43 | hypothetical protein MIMGU_mgv1a003087mg [Erythranthe guttata] gb|EYU28745.1| hy | 738 | 011029 (4) | gb|ABO93008.1| | 6e-90 | putative methyltransferase [Solanum tuberosum] |
| JMSF023I20 | Sequence | 601 | 003632 (5) | gb|EYU28744.1| | 1e-62 | hypothetical protein MIMGU_mgv1a003087mg [Erythranthe guttata] gb|EYU28745.1| hy | 735 | 011029 (4) | gb|ABO93008.1| | 4e-89 | putative methyltransferase [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF003I06+ CTCGGTAGTTCATATTTTCTCTCGGGAAAGTC
JMFF017B03+ GAAAGTC
JMSF023I20+ TGAGGAGGGCAATGCCTTTCTCGGTAGTTCATATTTTCTCTCGGGAAAGTC
____________________________________________________________
consensus TGAGGAGGGCAATGCCTTTCTCGGTAGTTCATATTTTCTCTCGGGAAAGTC
. : . : . : . : . : . :
JMFF003I06+ ATGGCACGGCTTTGATCTTGGCACGGGGTGTAATCGGTGTAGCGAGCATCACAAGGCTCG
JMFF017B03+ ATGGCACGGCTTTGATCTTGGCACGGGGTGTAATCGGTGTAGCGAGCATCACAAGGCTCG
JMSF023I20+ ATGGCACGGCTTTGATCTTGGCACGGGGTGTAATCGGTGTAGCGAGCATCACAAGGCTCG
JMSF017F05+ TGTAATCGGTGTAGCGAGCATCACAAGGCTCG
____________________________________________________________
consensus ATGGCACGGCTTTGATCTTGGCACGGGGTGTAATCGGTGTAGCGAGCATCACAAGGCTCG
. : . : . : . : . : . :
JMFF003I06+ ATTTCTTTCACTTTTGAGTCCGGTTCATCAACACCACCGGGCGGACCACCATGATGGCTC
JMFF017B03+ ATTTCTTTCACTTTTGAGTCCGGTTCATCAACACCACCGGGCGGACCACCATGATGGCTC
JMSF023I20+ ATTTCTTTCACTTTTGAGTCCGGTTCATCAACACCACCGGGCGGACCACCATGATGGCTC
JMSF017F05+ ATTTCTTTCACTTTTGAGTCCGGTTCATCAACACCACCGGGTGGACCACCATGATGGCTC
____________________________________________________________
consensus ATTTCTTTCACTTTTGAGTCCGGTTCATCAACACCACCGGGCGGACCACCATGATGGCTC
. : . : . : . : . : . :
JMFF003I06+ TCGAAATTGAGATTTGGCATGACATTGCAGTCATCCGTGGTCTTAGTCACCTCCAAAGCT
JMFF017B03+ TCGAAATTGAGATTTGGCATGACATTGCAGTCATCCGTGGTCTTAGTCACCTCCAAAGCT
JMSF023I20+ TCGAAATTGAGATTTGGCATGACATTGCAGTCATCCGTGGTCTTAGTCACCTCCAAAGCT
JMSF017F05+ TCGAAATTGAGATTTGGCATGACATTGCAGTCATCCGTGGTCTTAGTCACCTCCAAAGCT
____________________________________________________________
consensus TCGAAATTGAGATTTGGCATGACATTGCAGTCATCCGTGGTCTTAGTCACCTCCAAAGCT
. : . : . : . : . : . :
JMFF003I06+ ATGCTGTCTCCCTTCCCGAACCCACTCCTTTGCCATGCTCCCAGTAAATAGAAGAAACAA
JMFF017B03+ ATGCTGTCTCCCTTCCCGAACCCACTCCTTTGCCATGCTCCCAGTAAATAGAAGAAACAA
JMSF023I20+ ATGCTGTCTCCCTTCCCGAACCCACTCCTTTGCCATGCTCCCAGTAAATAGAAGAAACAA
JMSF017F05+ ATGCTGTCTCCCTTCCCGAACCCACTCCTTTGCCATGCTCCCAGTAAATAGAAGAAACAA
____________________________________________________________
consensus ATGCTGTCTCCCTTCCCGAACCCACTCCTTTGCCATGCTCCCAGTAAATAGAAGAAACAA
. : . : . : . : . : . :
JMFF003I06+ CAAAGACCAGCTATAATAAATATCGACACAGAACTCCTAGTCCGATTGTCCCCTGACACT
JMFF017B03+ CAAAGACCAGCTATAATAAATATCGACACAGAACTCCTAGTCCGATTGTCCCCTGACACT
JMSF023I20+ CAAAGACCAGCTATAATAAATATCGACACAGAACTCCTAGTCCGATTGTCCCCTGACACT
JMSF017F05+ CAAAGACCAGCTATAATAAATATCGACACAGAACTCCTAGTCCGATTGTCCCCTGACACT
____________________________________________________________
consensus CAAAGACCAGCTATAATAAATATCGACACAGAACTCCTAGTCCGATTGTCCCCTGACACT
. : . : . : . : . : . :
JMFF003I06+ GGTTTGTTTGCCATTACAACCCAATGGCATAAAAGAAATCAGGAAAACACACTGTTCTTG
JMFF017B03+ GGTTTGTTTGCCATTACAACCCAATGGCATAAAAGAAATCAGGAAAACACACTGTTCTTG
JMSF023I20+ GGTTTGTTTGCCATTACAACCCAATGGCATAAAAGAAATCAGGAAAACACACTGTTCTTG
JMSF004B03+ CCATTACAACCCAATGGCATAAAAGAAATCAGGAAAACACACTGTTCTTG
JMSF017F05+ GGTTTGTTTGCCATTACAACCCAATGGCATAAAAGAAATCAGGAAAACACACTGTTCTTG
____________________________________________________________
consensus GGTTTGTTTGCCATTACAACCCAATGGCATAAAAGAAATCAGGAAAACACACTGTTCTTG
. : . : . : . : . : . :
JMFF003I06+ GACGATCTTCAAGCGCCGCTGCTTTTCGCTTTATGGAGGCGTAGTCCTCAATCAAGAATA
JMFF017B03+ GACGATCTTCAAGCGCCGCTGCTTTTCGCTTTATGGAGGCGTAGTCCTCAATCAAGAATA
JMSF023I20+ GACGATCTTCAAGCGCCGCTGCTTTTCGCTTTATGGAGGCGTAGTCCTCAATCAAGAATA
JMSF004B03+ GACGATCTTCAAGCGCCGCTGCTTTTCGCTTTATGGAGGCGTAGTCCTCAATCAAGAATA
JMSF017F05+ GACGATCTTCAAGCGCCGCTGCTTTTCGCTTTATGGAGGCGTAGTCCTCAATCAAGAATA
____________________________________________________________
consensus GACGATCTTCAAGCGCCGCTGCTTTTCGCTTTATGGAGGCGTAGTCCTCAATCAAGAATA
. : . : . : . : . : . :
JMFF003I06+ TTGAAACAGAGCCCACCTACAAAGATTTTAGGGGAAGAAAGAAGTAAGAAAATTCACTCG
JMFF017B03+ TTGAAACAGAGCCCACCTACAAAGATTTTAGGGGAAGAAAGAAGTAAGAAAATTCACTCG
JMSF023I20+ TTGAAACAGAGCCCACCTACAAAGATTTTAGGGGAAGAAAGAAGTAAGAAAATTCACTCG
JMSF004B03+ TTGAAACAGAGCCCACCTACAAAGATTTTAGGGGAAGAAAGAAGTAAGAAAATTCACTCG
JMSF017F05+ TTGAAACAGAGCCCACCTACAAAGATTTTAGGGGAAGAAAGAAGTAAGAAAATTCACTCG
____________________________________________________________
consensus TTGAAACAGAGCCCACCTACAAAGATTTTAGGGGAAGAAAGAAGTAAGAAAATTCACTCG
. : . : . : . : . : . :
JMFF003I06+ CGAACCTTATCTCTCTCTTGATCTTGAAGATCAAGCTGGGCTGTCTCTCCCTTTAACTC
JMFF017B03+ CGAACCTTATCTCTCTCTTGATCTTGAAGATCAAGCTGGGCTGTCTCTCCCTTTAACTCT
JMSF023I20+ CGAACCTTATCTCTCTCTTGATCTTGAAGATCAAGCTGGGCTGTCTCTCCCTTTAACTCT
JMSF004B03+ CGAACCTTATCTCTCTCTTGATCTTGAAGATCAAGCTGGGCTGTCTCTCCCTTTAACTCT
JMSF017F05+ CGAACCTTATCTCTCTCTTGATCTTGAAGATCAAGCTGGGCTGTCTCTCCCTTTAACTCT
____________________________________________________________
consensus CGAACCTTATCTCTCTCTTGATCTTGAAGATCAAGCTGGGCTGTCTCTCCCTTTAACTCT
. : . : . : . : . : . :
JMFF017B03+ CCTTGT
JMSF023I20+ CCTTGT
JMSF004B03+ CCTTGTGGTAGAGGGAGTCCGAGTAGAAAGGATACTAAATAGTGATCAAAAATACGACCA
JMSF017F05+ CCTTGTGGTAGAGGGAGTCCGAGTAGAAAGGATACTAAATAGTGATCAAAAATACGACCA
____________________________________________________________
consensus CCTTGTGGTAGAGGGAGTCCGAGTAGAAAGGATACTAAATAGTGATCAAAAATACGACCA