Contig 003629:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O04Sequence336003629 (2)ref|XP_009597467.1|9e-51PREDICTED: mini-chromosome maintenance complex-binding protein [Nicotiana tomen580013938 (2)ref|XP_009799229.1|3e-41PREDICTED: mini-chromosome maintenance complex-binding protein [Nicotiana sylve
JMSF035M23Sequence618003629 (2)ref|XP_009597467.1|9e-94PREDICTED: mini-chromosome maintenance complex-binding protein [Nicotiana tomen499013938 (2)ref|XP_010695921.1|1e-22PREDICTED: mini-chromosome maintenance complex-binding protein [Beta vulgaris s

Alignment

This contig is upended


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JMSF035M23+                                                     GANGGAGGGGAAGCATGA
                      ____________________________________________________________
consensus                                                       GANGGAGGGGAAGCATGA
 
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JMSF035M23+           GACTCATCATTGGCTTCCATATCCACGTCATTCATTATTGGATCATCCTCCCTCTGGCGC
                      ____________________________________________________________
consensus             GACTCATCATTGGCTTCCATATCCACGTCATTCATTATTGGATCATCCTCCCTCTGGCGC
 
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JMSF035M23+           TTCTCCCTCTGTAAATCTGTATAATAAGTAGATTTTTTAAGGGAATCCATTACAACTTCA
                      ____________________________________________________________
consensus             TTCTCCCTCTGTAAATCTGTATAATAAGTAGATTTTTTAAGGGAATCCATTACAACTTCA
 
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JMSF035M23+           GAAGAAGGCTCAGTCCATGGATTCTGCCCTGGGACAGGGACACAATACAACAAGCGACGC
                      ____________________________________________________________
consensus             GAAGAAGGCTCAGTCCATGGATTCTGCCCTGGGACAGGGACACAATACAACAAGCGACGC
 
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JMSF035M23+           TCCCAAACTCGCATGTCAGGTGAATCACTCATTGGAAATTGAGAAACATCAGCAAACTTA
                      ____________________________________________________________
consensus             TCCCAAACTCGCATGTCAGGTGAATCACTCATTGGAAATTGAGAAACATCAGCAAACTTA
 
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JMSF035M23+           TTAGTTCTCCAAGCTTCCCCATCCTTATATGCTCCAACATAAAATTCATTACCGAGCATG
JMSF016O04+                                   TTATATGCTCCAACATAAAATTCATTACCGAGCATG
                      ____________________________________________________________
consensus             TTAGTTCTCCAAGCTTCCCCATCCTTATATGCTCCAACATAAAATTCATTACCGAGCATG
 
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JMSF035M23+           TCTTGGATCATTCCCCGGAATCGAACTAGAGTGCGGGGCTGAATCCACCTAATTGTAGAA
JMSF016O04+           TCTTGGATCATTCCCCGGAATCGAACTAGAGTGCGGGGCTGAATCCACCTAATTGTAGAA
                      ____________________________________________________________
consensus             TCTTGGATCATTCCCCGGAATCGAACTAGAGTGCGGGGCTGAATCCACCTAATTGTAGAA
 
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JMSF035M23+           GGATTAAGCATCGGTACCTGTGAGAGACCGCCATCGTCAAAAAGGAACTGCCGGAAAAGT
JMSF016O04+           GGATTAAGCATCGGTACCTGTGAGAGACCGCCATCGTCAAAAAGGAACTGCCGGAAAAGT
                      ____________________________________________________________
consensus             GGATTAAGCATCGGTACCTGTGAGAGACCGCCATCGTCAAAAAGGAACTGCCGGAAAAGT
 
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JMSF035M23+           TCAGTGGCGCCCCAATCCCGGCCGTCAAACGTGGAAGGATCAGAACCTGATGAAACGGCC
JMSF016O04+           TCAGTGGCGCCCCAATCCCGGCCGTCAAACGTGGAAGGATCAGAACCTGATGAAACGGCC
                      ____________________________________________________________
consensus             TCAGTGGCGCCCCAATCCCGGCCGTCAAACGTGGAAGGATCAGAACCTGATGAAACGGCC
 
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JMSF035M23+           TTGTCGAACGTCAATCTGACGGCTCCAAGTGGATTTGCAAGGCAATCGTATGGTAGCCCC
JMSF016O04+           TTGTCGAACGTCAATCTGACGGCTCCAAGTGGATTTGCAAGGCAATCGTATGGTAGCCCC
                      ____________________________________________________________
consensus             TTGTCGAACGTCAATCTGACGGCTCCAAGTGGATTTGCAAGGCAATCGTATGGTAGCCCC
 
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JMSF035M23+           ACCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTAGGGTTGATCGAGGACGC  
JMSF016O04+           ACCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTAGGGTTGATCGAGGACGCTC
                      ____________________________________________________________
consensus             ACCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTAGGGTTGATCGAGGACGCTC