Contig 003628:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007G17Sequence427003628 (3)ref|XP_009611013.1|93.6PREDICTED: uncharacterized protein LOC104104586 [Nicotiana tomentosiformis] ref|
JMSF016N23Sequence266003628 (3)797003628 (3)ref|XP_009611013.1|189PREDICTED: uncharacterized protein LOC104104586 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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rJMSF016N23-                                                       AAGGATGTTATACAC
                      ____________________________________________________________
consensus                                                          AAGGATGTTATACAC
 
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rJMSF016N23-          AAGTGGAAGCTGGATAACACTTGTTGATCAATCTGATCTCTTACTGATACACTTTGAGCA
                      ____________________________________________________________
consensus             AAGTGGAAGCTGGATAACACTTGTTGATCAATCTGATCTCTTACTGATACACTTTGAGCA
 
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rJMSF016N23-          GATAATCTCCTCCGGTTCTAGTGATGCCCTCTCAAAAAATGTCATTTGTGAGTTTGTGTG
                      ____________________________________________________________
consensus             GATAATCTCCTCCGGTTCTAGTGATGCCCTCTCAAAAAATGTCATTTGTGAGTTTGTGTG
 
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rJMSF016N23-          TAGAGATGCCAGTGACCCTTAGCTTAACGGGTTATGGCTAGCCTGTGTAAGATTTGAGAT
                      ____________________________________________________________
consensus             TAGAGATGCCAGTGACCCTTAGCTTAACGGGTTATGGCTAGCCTGTGTAAGATTTGAGAT
 
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rJMSF016N23-          CTCGAAAACAACTCTGTTGATCTCATGCAAAGAAACCAGAAAAAGACACTATCCCTATAC
                      ____________________________________________________________
consensus             CTCGAAAACAACTCTGTTGATCTCATGCAAAGAAACCAGAAAAAGACACTATCCCTATAC
 
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rJMSF016N23-          AAGAACAGCATTATTTCATATTGTGGTTTATAACCTAGATCACGCTAGTTTGGTGGTTTA
                      ____________________________________________________________
consensus             AAGAACAGCATTATTTCATATTGTGGTTTATAACCTAGATCACGCTAGTTTGGTGGTTTA
 
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rJMSF016N23-          AAGGGCAACAGAACTAACATCTGTTTAACTCTGGGTCTGGGATAATATAAGAAACGAAGG
                      ____________________________________________________________
consensus             AAGGGCAACAGAACTAACATCTGTTTAACTCTGGGTCTGGGATAATATAAGAAACGAAGG
 
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rJMSF016N23-          TTTAAAACGAGATACTTGGGATGTTAAATAACCGGTTGAAAGCTCGAGGATTAGGGTAAC
                      ____________________________________________________________
consensus             TTTAAAACGAGATACTTGGGATGTTAAATAACCGGTTGAAAGCTCGAGGATTAGGGTAAC
 
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rJMSF016N23-          TTAGGCTGTGAAGTGCCTCTTCCAAGTGGTGTTGGTTTAATGTCTGGTTTTGTAAACCAG
                      ____________________________________________________________
consensus             TTAGGCTGTGAAGTGCCTCTTCCAAGTGGTGTTGGTTTAATGTCTGGTTTTGTAAACCAG
 
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rJMSF016N23-          GTGGAATACAGGAATTGCTTGTTGGGACCTACGTGGTTGCATATAATCTTAAGCTTTTGT
                      ____________________________________________________________
consensus             GTGGAATACAGGAATTGCTTGTTGGGACCTACGTGGTTGCATATAATCTTAAGCTTTTGT
 
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rJMSF016N23-          CTTTCCCTCATCCATCTTAGCACTATCTTCATGTGCCTTTTGCTTGTTAATCCTCGGACT
                      ____________________________________________________________
consensus             CTTTCCCTCATCCATCTTAGCACTATCTTCATGTGCCTTTTGCTTGTTAATCCTCGGACT
 
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rJMSF016N23-          CCAACTTCCTTCACACGTTCCCAGGTATCAGCAATGCTGAGAGGACCATGCTCCTTCAAA
JMSF007G17+                                     ATCAGCAATGCTGAGAGGACCATGCTCCTTCAAA
                      ____________________________________________________________
consensus             CCAACTTCCTTCACACGTTCCCAGGTATCAGCAATGCTGAGAGGACCATGCTCCTTCAAA
 
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rJMSF016N23-          ATGTCAAAAATAACCCTGGTGATAGTCTGTGTCTGCTCTGGTGGGGTTTTCAGCTCTATT
JMSF007G17+           ATGTCAAAAATAACCCTGGTGATAGTCTGTGTCTGCTCTGGTGGGGTTTTCAGCTCTATT
                      ____________________________________________________________
consensus             ATGTCAAAAATAACCCTGGTGATAGTCTGTGTCTGCTCTGGTGGGGTTTTCAGCTCTATT
 
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rJMSF016N23-          GGTTTCATCTTTGGCTTTGGC-TCCTCGCCACCATGTACCTTATTGCTGTCC        
JMSF007G17+           GGTTTCATCTTTGGCTTTGGCTTCCTCGCCACCATGTACCTTATTGCTGTCCCAAACATG
                      ____________________________________________________________
consensus             GGTTTCATCTTTGGCTTTGGCTTCCTCGCCACCATGTACCTTATTGCTGTCCCAAACATG
 
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JMSF007G17+           ATAGCTCCTCTCCAGATCTTAGAAAATCAATGTCTGGCTTTAGTTTTTGGTGAAGCTTAA
JMSF016N23+                                             TGGCTTTAGTTTTTGGTGAAGCTTAA
                      ____________________________________________________________
consensus             ATAGCTCCTCTCCAGATCTTAGAAAATCAATGTCTGGCTTTAGTTTTTGGTGAAGCTTAA
 
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JMSF007G17+           CTTTACACGTATCGACAATTATAACCTTAACAGTCTTCAAGAATCAATTTTTAACCAGGA
JMSF016N23+           CTTTACACGTATCGACAATTATAACCTTAACAGTCTTCAAGAATCAATTTTTAACCAGGA
                      ____________________________________________________________
consensus             CTTTACACGTATCGACAATTATAACCTTAACAGTCTTCAAGAATCAATTTTTAACCAGGA
 
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JMSF007G17+           ATTTAGGGTTAAGGATTTGATCATTCGATCCTGAGGAGTTGCTCACGAGTGGACGACGGT
JMSF016N23+           ATTTAGGGTTAAGGATTTGATCATTCGATCCTGAGGAGTTGCTCACGAGTGGACGACGGT
                      ____________________________________________________________
consensus             ATTTAGGGTTAAGGATTTGATCATTCGATCCTGAGGAGTTGCTCACGAGTGGACGACGGT
 
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JMSF007G17+           CGACAGAGCTTCTGACTGAAAGCTTGAGGCGAAGGCGGCGGAGCTGCTGGCTCGGTGCGG
JMSF016N23+           CGACAGAGCTTCTGACTGAAAGCTTGAGGCGAAGGCGGCGGAGCTGCTGGCTCGGTGCGG
                      ____________________________________________________________
consensus             CGACAGAGCTTCTGACTGAAAGCTTGAGGCGAAGGCGGCGGAGCTGCTGGCTCGGTGCGG
 
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JMSF007G17+           GCTATGGCGCACAGGCAGTAATGCAGGCTGCT                            
JMSF016N23+           GCTATGGCGCACAGGCAGTAATGCAGGCTGCTACTGCTTGGTGAAGAATGAAATTTTCTC
                      ____________________________________________________________
consensus             GCTATGGCGCACAGGCAGTAATGCAGGCTGCTACTGCTTGGTGAAGAATGAAATTTTCTC