Contig 003626:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN014H04Sequence615003626 (3)ref|XP_009618547.1|2e-24PREDICTED: mediator-associated protein 2 [Nicotiana tomentosiformis]
JMSF016L18Sequence478003626 (3)ref|XP_011069352.1|2e-47PREDICTED: mediator-associated protein 2-like isoform X2 [Sesamum indicum] ref|769003626 (3)ref|XP_011069352.1|6e-55PREDICTED: mediator-associated protein 2-like isoform X2 [Sesamum indicum] ref|

Alignment

This contig is upended


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JMFN014H04+                    TCAAAGCTCTACATAATAATCTAGACAAACCGGTGAGTCATTTTAATATTC
rJMSF016L18-                      AAGCTCTACATAATAATCTAGACAAACCGGTGAGTCATTTTAATATTC
                      ____________________________________________________________
consensus                      TCAAAGCTCTACATAATAATCTAGACAAACCGGTGAGTCATTTTAATATTC
 
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JMFN014H04+           CGTATGATCTTCCTCAAAATTGTGCATCAAGATTGAAACAAGATCTGATAAATGGAAGCT
rJMSF016L18-          CGTATGATCTTCCTCAAAATTGTGCATCAAGATTGAAACAAGATCTGATAAATGGAAGCT
                      ____________________________________________________________
consensus             CGTATGATCTTCCTCAAAATTGTGCATCAAGATTGAAACAAGATCTGATAAATGGAAGCT
 
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JMFN014H04+           GCTATAACAGTTTGAAGATTCAATTAGCCCTCGACTTTTTTGCTTTTCTTTCTTGAGAAT
rJMSF016L18-          GCTATAACAGTTTGAAGATTCAATTAGCCCTCGAC-TTTTTGCTTTTCTTTCTTGAGAAT
                      ____________________________________________________________
consensus             GCTATAACAGTTTGAAGATTCAATTAGCCCTCGACTTTTTTGCTTTTCTTTCTTGAGAAT
 
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JMFN014H04+           GCCCCGCTGATCCAGAACTGGTAACTGCACTGTTGGCTCTGCCAGAATCCTGCACAGACT
rJMSF016L18-          GCCCCGCTGATCCAGAACTGGTAACTGCACTGTTGGCTCTGCCAGAATCCTGCACAGACT
                      ____________________________________________________________
consensus             GCCCCGCTGATCCAGAACTGGTAACTGCACTGTTGGCTCTGCCAGAATCCTGCACAGACT
 
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JMFN014H04+           GGTCCATGGACTTTGAAGACTCACCGTGGCTTCTTTTCTTTGGAGTCTTAGATGGCTCAC
rJMSF016L18-          GGTCCATGGACTTTGAAGACTCACCGTGGCTTCTTTTCTTTGGAGTCTTAGATGGCTCAC
                      ____________________________________________________________
consensus             GGTCCATGGACTTTGAAGACTCACCGTGGCTTCTTTTCTTTGGAGTCTTAGATGGCTCAC
 
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JMFN014H04+           CCAATTTGGATTTGGAACTTTTCTGTTGGCTACTAGGAGTGTTGGTAGTGTAGATACTCG
rJMSF016L18-          CCAATTTGGATTTGGAACTTTTCTGTTGGCTACTAGGAGTGTTGGTAGTGTAGATACTCG
                      ____________________________________________________________
consensus             CCAATTTGGATTTGGAACTTTTCTGTTGGCTACTAGGAGTGTTGGTAGTGTAGATACTCG
 
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JMFN014H04+           TAGATTGTGAACTTCTATGCTTACTACTTTTAGTAGCACTTGAAGAATGGAAAACTGAAC
rJMSF016L18-          TAGATTGTGAACTTCTATGCTTACTACTTTTAGTAGCACTTGAAGAATGGAAAACTGAAC
                      ____________________________________________________________
consensus             TAGATTGTGAACTTCTATGCTTACTACTTTTAGTAGCACTTGAAGAATGGAAAACTGAAC
 
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JMFN014H04+           TTGTCTTTGTCATCGTTGAAGACCTCTGAGCTATCTCCTTCAAACTCATTTTGTTGTGTT
rJMSF016L18-          TTGTCTTTGTCATCGTTGAAGACCTCTGAGCTATCTCCTTCAAACTCATTTTGTTGTGTT
                      ____________________________________________________________
consensus             TTGTCTTTGTCATCGTTGAAGACCTCTGAGCTATCTCCTTCAAACTCATTTTGTTGTGTT
 
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JMFN014H04+           TCTGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
rJMSF016L18-          TCTGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
JMSF016L18+             TGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
                      ____________________________________________________________
consensus             TCTGAAATTCACTAGGCTCTGGATAGTGAATAAAAGAAACATGGCGCGAAATCTTTCCAA
 
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JMFN014H04+           CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
rJMSF016L18-          CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
JMSF016L18+           CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
                      ____________________________________________________________
consensus             CAGCTTTTGCCTCTGATGCAGAAGATAGAAATACCGTTCCAACTGGATCCTGGGCTTTTA
 
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JMFN014H04+           AATTGAAAACATCATAAGATTTTC                                    
rJMSF016L18-          AATTGAAAACATCATAAGATTTTCCAGAAGAACTCTCAAAGCTGCCTAAATGCCCCTCAT
JMSF016L18+           AATTGAAAACATCATAAGATTTTCCAGAAGAACTCTCAAAGCTGCCTAAATGCCCCTCAT
                      ____________________________________________________________
consensus             AATTGAAAACATCATAAGATTTTCCAGAAGAACTCTCAAAGCTGCCTAAATGCCCCTCAT
 
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rJMSF016L18-          TATCAAGTTTCAGTGACACTTGCCCATCAAAATCTGAAGAATGATTTTGGGGCCATTGGA
JMSF016L18+           TATCAAGTTTCAGTGACACTTGCCCATCAAAATCTGAAGAATGATTTTGGGGCCATTGGA
                      ____________________________________________________________
consensus             TATCAAGTTTCAGTGACACTTGCCCATCAAAATCTGAAGAATGATTTTGGGGCCATTGGA
 
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rJMSF016L18-          TGAGCCAGAGCTCAGTTGAATCCGTTAATTTAAGTTCAACAAGTGGATCTCTTTTATCCT
JMSF016L18+           TGAGCCAGAGCTCAGTTGAATCCGTTAATTTAAGTTCAACAAGTGGATCTCTTTTATCCT
                      ____________________________________________________________
consensus             TGAGCCAGAGCTCAGTTGAATCCGTTAATTTAAGTTCAACAAGTGGATCTCTTTTATCCT
 
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rJMSF016L18-          CC                                                          
JMSF016L18+           CCACAAAATCAGAAGGAGGTTTGTAACCCAATTCATTAGCAACATCCATTTGCTAACCAG
                      ____________________________________________________________
consensus             CCACAAAATCAGAAGGAGGTTTGTAACCCAATTCATTAGCAACATCCATTTGCTAACCAG
 
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JMSF016L18+           GAGACACCACAGATAATCCTGAACCACAGCCGGCTACTGCCGGAGTGACGGACGGAGACA
                      ____________________________________________________________
consensus             GAGACACCACAGATAATCCTGAACCACAGCCGGCTACTGCCGGAGTGACGGACGGAGACA
 
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JMSF016L18+           GATAATCCTGTTGGCGACCGGCGAGAGCGAGAATCCTCTACTTCTGCAGTCTGAGTCGCC
                      ____________________________________________________________
consensus             GATAATCCTGTTGGCGACCGGCGAGAGCGAGAATCCTCTACTTCTGCAGTCTGAGTCGCC