Contig 003621:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016A10Sequence242003621 (2)770005836 (2)ref|XP_009609395.1|1e-60PREDICTED: mitochondrial substrate carrier family protein B [Nicotiana tomentos
JMSF050F12Sequence733003621 (2)ref|XP_009609395.1|3e-96PREDICTED: mitochondrial substrate carrier family protein B [Nicotiana tomentos732005836 (2)ref|XP_009609395.1|7e-52PREDICTED: mitochondrial substrate carrier family protein B [Nicotiana tomentos

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+                                                         CTGCAAATGGTACG
                      ____________________________________________________________
consensus                                                           CTGCAAATGGTACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           AACAGCATGGGTAATGCCCTGATAATACATGGCACTCCTCTGTGCTGCCAACCTTGTCCT
                      ____________________________________________________________
consensus             AACAGCATGGGTAATGCCCTGATAATACATGGCACTCCTCTGTGCTGCCAACCTTGTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           AACAAGATCCAATGGGTAGGTGGCAGAAGCAGCTGTCATTCCAGCTAACCCACCACCTAC
                      ____________________________________________________________
consensus             AACAAGATCCAATGGGTAGGTGGCAGAAGCAGCTGTCATTCCAGCTAACCCACCACCTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           AAAATGCACAAATACATCTGCACTCGCATTTCCCTGATTACCATCCAGGCCAGGAATAGA
                      ____________________________________________________________
consensus             AAAATGCACAAATACATCTGCACTCGCATTTCCCTGATTACCATCCAGGCCAGGAATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           TTTCAAGATTTTCTTGTAGTATTCATAAGTATAAAAATTGACTGAAGAATAGGGGAGCCT
                      ____________________________________________________________
consensus             TTTCAAGATTTTCTTGTAGTATTCATAAGTATAAAAATTGACTGAAGAATAGGGGAGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           ATGAGCAATAGTGACAAGGTTTCCCTTCCAAAATGCTCTGAATCCTTCTTCATTAACAAT
                      ____________________________________________________________
consensus             ATGAGCAATAGTGACAAGGTTTCCCTTCCAAAATGCTCTGAATCCTTCTTCATTAACAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           CCGCAAAGTCTCACGGCATATACTTGGCTTGCTCAACACTGCTACGTCTGAATGCATGCC
                      ____________________________________________________________
consensus             CCGCAAAGTCTCACGGCATATACTTGGCTTGCTCAACACTGCTACGTCTGAATGCATGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           TTGGACCTGAAATAGAATGGTGAGGCGAGCTAGAGGAGCAGTACAGGTCTTGCTGAAAGC
                      ____________________________________________________________
consensus             TTGGACCTGAAATAGAATGGTGAGGCGAGCTAGAGGAGCAGTACAGGTCTTGCTGAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           TCCGGCAATACCGCCGGCGAGAAGCTGCGGCACAGTCCCAATTTGCGTCTGCGGATTCTG
JMSF016A10+                                                                     TG
                      ____________________________________________________________
consensus             TCCGGCAATACCGCCGGCGAGAAGCTGCGGCACAGTCCCAATTTGCGTCTGCGGATTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           AGGCTGCTGTTGCTGCTGCGTGTGGAAGTGATGATATTTCTGACGCTGGTGGTGGTGCTG
JMSF016A10+           AGGCTGCTGTTGCTGCTGCGTGTGGAAGTGATGATATTTCTGACGCTGGTGGTGGTGCTG
                      ____________________________________________________________
consensus             AGGCTGCTGTTGCTGCTGCGTGTGGAAGTGATGATATTTCTGACGCTGGTGGTGGTGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           CGGCAGAAACGACCCGGGGCCGCCGTCAACTACGGCGCCGCCGCGACCAGACATTCCTAC
JMSF016A10+           CGGCAGAAACGACCCGGGGCCGCCGTCAACTACGGCGCCGCCGCGACCAGACATTCCTAC
                      ____________________________________________________________
consensus             CGGCAGAAACGACCCGGGGCCGCCGTCAACTACGGCGCCGCCGCGACCAGACATTCCTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           TCTGGCTTCCATCGTCTTTTTGCACTATAAAATTTGAAAATTTGTAGAAACTTCACATTT
JMSF016A10+           TCTGGCTTCCATCGTCTTTTTGCACTATAAAATTTGAAAATTTGTAGAAACTTCACATTT
                      ____________________________________________________________
consensus             TCTGGCTTCCATCGTCTTTTTGCACTATAAAATTTGAAAATTTGTAGAAACTTCACATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050F12+           GATCTTCGCTGAGAATTTCGTTTCCGGGTGCAGGGAAGTTAAACCCTAGGGAAAACCC  
JMSF016A10+           GATCTTCGCTGAGAATTTCGTTTCCGGGTGCAGGGAAGTTAAACCCTAGGGAAAACCCTC
                      ____________________________________________________________
consensus             GATCTTCGCTGAGAATTTCGTTTCCGGGTGCAGGGAAGTTAAACCCTAGGGAAAACCCTC