Contig 003620:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF015P17-          AGCAGTTTCAACATAGGAAACCAAAAGTTCAAACAAATGGGGCAATCAAAAGTATGCATA
                      ____________________________________________________________
consensus             AGCAGTTTCAACATAGGAAACCAAAAGTTCAAACAAATGGGGCAATCAAAAGTATGCATA
 
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rJMSF015P17-          ACAGTCAAAATTTATGTTTGAACCTCAAAGGATGAAGAAAAAGTATGTTCTCTGTTCGAT
                      ____________________________________________________________
consensus             ACAGTCAAAATTTATGTTTGAACCTCAAAGGATGAAGAAAAAGTATGTTCTCTGTTCGAT
 
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rJMSF015P17-          GAAAAACTATGTTCATTAGGCTGCTTCATATAGGCTTCATTGGGTGGTGGTAGACAATCT
                      ____________________________________________________________
consensus             GAAAAACTATGTTCATTAGGCTGCTTCATATAGGCTTCATTGGGTGGTGGTAGACAATCT
 
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rJMSF015P17-          CTTGCTTAACCTTCAAAGTCCTGGAAGACATCCAAGTCTTTTGCATCTTCCATTGAAATT
JMFN034B14+                       TCAAAGTCCTGGAAGACATCCAAGTCTTNTGCATCTTCCATTGAAATT
                      ____________________________________________________________
consensus             CTTGCTTAACCTTCAAAGTCCTGGAAGACATCCAAGTCTTTTGCATCTTCCATTGAAATT
 
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rJMSF015P17-          GAAAATGATTCTTCTGCAGTGAAATTCTCCCTCAAGTCTGGATTGAACTTAATTTTCAAG
JMFN034B14+           GAAAATGATTCTTCTGCAGTGAAATTCTCCCTCAAGTCTGGATTGAACTTAATTTTCAAG
                      ____________________________________________________________
consensus             GAAAATGATTCTTCTGCAGTGAAATTCTCCCTCAAGTCTGGATTGAACTTAATTTTCAAG
 
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rJMSF015P17-          ACCACGTAATTTAATAAAAAGTCATGAAAGACGCTATTCTGAAGATAATGGTCAGGAACT
JMFN034B14+           ACCACGTAATNTAATAAAAAGTCATGAAAGACGCTATTCTGAAGATAATGGTCAGGAACT
                      ____________________________________________________________
consensus             ACCACGTAATTTAATAAAAAGTCATGAAAGACGCTATTCTGAAGATAATGGTCAGGAACT
 
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rJMSF015P17-          CGCTTTGGATTGTATCTGTACTCCTTTATCACCCAACCTGTCCTCTTCTCACAGCGGTAC
JMFN034B14+           CGCTTTGGATTGTATCTGTACTCCTTTATCACCCAACCTGTCCTCTTCTCACAGCGGTAC
                      ____________________________________________________________
consensus             CGCTTTGGATTGTATCTGTACTCCTTTATCACCCAACCTGTCCTCTTCTCACAGCGGTAC
 
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rJMSF015P17-          AAGTATAGCTTTCTTTTGAACCCCAGAATTTGGTTCTGACCAAAACATGCCTCTTCTAGA
JMFN034B14+           AAGTATAGCTTTCTTTTGAACCCCAGAATTTGGTTCTGACCAAAACATGCCTCTTCTAGA
                      ____________________________________________________________
consensus             AAGTATAGCTTTCTTTTGAACCCCAGAATTTGGTTCTGACCAAAACATGCCTCTTCTAGA
 
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rJMSF015P17-          CCTTCAGTTTTCCATTCACCATCAAACTTCTTTCCTCCAAGAAACTCGCCATTTGGAGGT
JMFN034B14+           CCTTCAGTTTTCCATTCACCATCAAACTTCTTTCCTCCAAGAAACTCGCCATTTGGAGGT
                      ____________________________________________________________
consensus             CCTTCAGTTTTCCATTCACCATCAAACTTCTTTCCTCCAAGAAACTCGCCATTTGGAGGT
 
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rJMSF015P17-          TTTTTACCTTTGTGGGTAAAATAGTATGCCTCATTGTTCCTAGCATACTTGAACTTACCA
JMFN034B14+           TTTTTACCTTTGTGGGTAAAATAGTATGCCTCATTGTTCCTAGCATACTTGAACTTACCA
JMSF015P17+                       TGGGTAAAATAGTATGCCTCATTGTTCCTAGCATACTTGAACTTACCA
                      ____________________________________________________________
consensus             TTTTTACCTTTGTGGGTAAAATAGTATGCCTCATTGTTCCTAGCATACTTGAACTTACCA
 
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rJMSF015P17-          ATTGGGAGAAGTTCAGGAGGATACTCGTACAAAAATGGAATCTCTTTGATGATCTCGTTG
JMFN034B14+           ATTGGGAGAAGTTCAGGAGGATACTCGTACAAAAATGGAATCTCTTTGATGATCTCGTTG
JMSF015P17+           ATTGGGAGAAGTTCAGGAGGATACTCGTACAAAAATGGAATCTCTTTGATGATCTCGTTG
                      ____________________________________________________________
consensus             ATTGGGAGAAGTTCAGGAGGATACTCGTACAAAAATGGAATCTCTTTGATGATCTCGTTG
 
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rJMSF015P17-          GGAAGAGGGCGACGTTCGATCTTTTTCTTCAGAAATCCGTTAATCAATTCGGATTCGGTA
JMFN034B14+           GGAAGAGGGCGACGTTCGATCTTTTTCTTCAGAAATCCGTTAATCAATTCGGATTCGGTA
JMSF015P17+           GGAAGAGGGCGACGTTCGATCTTTTTCTTCAGAAATCCGTTAATCAATTCGGATTCGGTA
                      ____________________________________________________________
consensus             GGAAGAGGGCGACGTTCGATCTTTTTCTTCAGAAATCCGTTAATCAATTCGGATTCGGTA
 
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rJMSF015P17-          GGAATAAAATACTGACCGCGTCTACCCATACCCGGTTCGTAAAGATGCTCGTATACTTCC
JMFN034B14+           GGAATAAAATACTGACCGCGTCTACCCATACCCGGTTCGTAAAGATGCTCGTATACTTCC
JMSF015P17+           GGAATAAAATACTGACCGCGTCTACCCATACCCGGTTCGTAAAGATGCTCGTATACTTCC
                      ____________________________________________________________
consensus             GGAATAAAATACTGACCGCGTCTACCCATACCCGGTTCGTAAAGATGCTCGTATACTTCC
 
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rJMSF015P17-          AATTCATCCATGGAT                                             
JMFN034B14+           AATTCATCCATGGAT                                             
JMSF015P17+           AATTCATCCATGGATACGGCTATGCTGTAGGAGAAGAGTAGGATTAGAGTAGAACTGTCC
                      ____________________________________________________________
consensus             AATTCATCCATGGATACGGCTATGCTGTAGGAGAAGAGTAGGATTAGAGTAGAACTGTCC