Contig 003617:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015C03Sequence302003617 (3)emb|CDP09597.1|5e-18unnamed protein product [Coffea canephora]747002946 (3)ref|XP_009607053.1|1e-70PREDICTED: ubiquitin-associated domain-containing protein 2 isoform X2 [Nicotia
JMSF015G17Sequence481003617 (3)ref|XP_011075444.1|1e-37PREDICTED: ubiquitin-associated domain-containing protein 2 [Sesamum indicum]724002946 (3)ref|XP_011075444.1|3e-59PREDICTED: ubiquitin-associated domain-containing protein 2 [Sesamum indicum]
JMSF039N03Sequence669003617 (3)ref|XP_011075444.1|2e-51PREDICTED: ubiquitin-associated domain-containing protein 2 [Sesamum indicum]870002946 (3)ref|XP_011075444.1|1e-40PREDICTED: ubiquitin-associated domain-containing protein 2 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF039N03+ CATTCAATTACAGAGTATTTACAATTGACTGGTTA
                      ____________________________________________________________
consensus CATTCAATTACAGAGTATTTACAATTGACTGGTTA
 
. : . : . : . : . : . :
JMSF039N03+ TGGAAGCAAAAAATTCAAACAATTTCTTTAATCCAACTGATTTGGCACTCGGATATGAAA
                      ____________________________________________________________
consensus TGGAAGCAAAAAATTCAAACAATTTCTTTAATCCAACTGATTTGGCACTCGGATATGAAA
 
. : . : . : . : . : . :
JMSF039N03+ TTATAAAAATCTATATCGGTTCAAATCTCAAAGTTGGGATATCAATTCTTAGTATAATAG
                      ____________________________________________________________
consensus TTATAAAAATCTATATCGGTTCAAATCTCAAAGTTGGGATATCAATTCTTAGTATAATAG
 
. : . : . : . : . : . :
JMSF039N03+ GAATCATCAAGCACTACCTTTAAGAAGTTTTAATGCAATGGTCTCTAGTAGTAAAGAAAC
                      ____________________________________________________________
consensus GAATCATCAAGCACTACCTTTAAGAAGTTTTAATGCAATGGTCTCTAGTAGTAAAGAAAC
 
. : . : . : . : . : . :
JMSF039N03+ TATAACAGAGAATAGGATGAAGACAGAATACTTATTCGAACCAATTTGCCTTTCAAAGAC
JMSF015G17+ C
                      ____________________________________________________________
consensus TATAACAGAGAATAGGATGAAGACAGAATACTTATTCGAACCAATTTGCCTTTCAAAGAC
 
. : . : . : . : . : . :
JMSF039N03+ TCGGAAGTAGTAGAGCAGATATGCTCCAAATATTAGTTCTGGGGTAGATGAAAAGGAAAA
JMSF015G17+ TCGGAAGTAGTAGAGCAGATATGCTCCAAATATTAGTTCTGGGGTAGATGAAAAGGAAAA
                      ____________________________________________________________
consensus TCGGAAGTAGTAGAGCAGATATGCTCCAAATATTAGTTCTGGGGTAGATGAAAAGGAAAA
 
. : . : . : . : . : . :
JMSF039N03+ TACAGATACAATTAGCTTCCAGAGTTGAAGTTTCTTGAAGATATCCTGATAAGACCATCC
JMSF015C03+ GAAGATATCCTGATAAGACCATCC
JMSF015G17+ TACAGATACAATTAGCTCCCAGAGTTGAAGTTTCTTGAAGATATCCTGATAAGACCATCC
                      ____________________________________________________________
consensus TACAGATACAATTAGCTTCCAGAGTTGAAGTTTCTTGAAGATATCCTGATAAGACCATCC
 
. : . : . : . : . : . :
JMSF039N03+ GAGGTTGCTGGAACGGCCTTGAATTCCAAAGACGATTGTGAAGAGAGCACACACAATCAC
JMSF015C03+ GAGGTTGCTGGAACGGCCTTGAATTCCAAAGACGATTGTGAAGAGAGCACACACAATCAC
JMSF015G17+ GAGGTTGCTGGAACGGCCTTGAATTCCAAAGACGATTGTGAAGAGAGCACACACAATCAC
                      ____________________________________________________________
consensus GAGGTTGCTGGAACGGCCTTGAATTCCAAAGACGATTGTGAAGAGAGCACACACAATCAC
 
. : . : . : . : . : . :
JMSF039N03+ CAACGCTCTCGTCACCGGCGCATTGTTGAAACCAGATGGGCCGCCGTTCATCTCCGTAGT
JMSF015C03+ CAACGCTCTCGTCACCGGCGCATTGTTGAAACCAGATGGGCCGCCGTTCATCTCCGTAGT
JMSF015G17+ CAACGCTCTCGTCACCGGCGCATTGTTGAAACCAGATGGGCCGCCGTTCATCTCCGTAGT
                      ____________________________________________________________
consensus CAACGCTCTCGTCACCGGCGCATTGTTGAAACCAGATGGGCCGCCGTTCATCTCCGTAGT
 
. : . : . : . : . : . :
JMSF039N03+ GAACCCGACGACCTGAATTGAGCTCACCGTCAATTATCCTTCGGCGCTTATGCTCTTCCA
JMSF015C03+ GAACCCGACGACCTGAATTGAGCTCACCGTCAATTATCCTTCGGCGCTTATGCTCTTCCA
JMSF015G17+ GAACCCGACGACCTGAATTGAGCTCACCGTCAATTATCCTTCGGCGCTTATGCTCTTCCA
                      ____________________________________________________________
consensus GAACCCGACGACCTGAATTGAGCTCACCGTCAATTATCCTTCGGCGCTTATGCTCTTCCA
 
. : . : . : . : . : . :
JMSF039N03+ CTTCCGCTCTGTCTGTACCAATATGTACAACTGTATGTACGTATAGTCAGTCAATCTCTC
JMSF015C03+ CTTCCGCTCTGTCTGTACCAATATGTACAACTGTATGTACGTATAGTCAGTCAATCTCTC
JMSF015G17+ CTTCCGCTCTGTCTGTACCAATATGTACAACTGTATGTACGTATAGTCAGTCAATCTCTC
                      ____________________________________________________________
consensus CTTCCGCTCTGTCTGTACCAATATGTACAACTGTATGTACGTATAGTCAGTCAATCTCTC
 
. : . : . : . : . : . :
JMSF039N03+ CGCCTCTTCGTCTTCTTCAAGAAATTTGCCC
JMSF015C03+ CGCCTCTTCGTCTTCTTCAAGAAATTTGCCC
JMSF015G17+ CGCCTCTTCGTCTTCTTCAAGAAATTTGCCCTCTTCTGGAATTCTCTTCGCGATGGGGAT
                      ____________________________________________________________
consensus CGCCTCTTCGTCTTCTTCAAGAAATTTGCCCTCTTCTGGAATTCTCTTCGCGATGGGGAT
 
. : . : . : . : . : . :
JMSF015G17+ TTATCGGATTTGTTCGTTAATGCCGGAGGTTTGGTAAACGGGTCGGGCTGCTTTTTCGTC
                      ____________________________________________________________
consensus TTATCGGATTTGTTCGTTAATGCCGGAGGTTTGGTAAACGGGTCGGGCTGCTTTTTCGTC