Contig 003615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E02Sequence446003615 (4)ref|XP_009613894.1|1e-05PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]739003944 (3)ref|XP_009613894.1|9e-39PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]
JMFS068A05Sequence611003615 (4)ref|XP_009613894.1|5e-11PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]
JMSF012I17Sequence464003615 (4)ref|XP_009613894.1|2e-05PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]722003944 (3)ref|XP_009613894.1|3e-41PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]
JMSF014I22Sequence239003615 (4)795003944 (3)ref|XP_009613894.1|1e-47PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS068A05+ ATTCATTCCCTGAACGAATNTGAGTTCCAGAGCTTTCTGTAT
                      ____________________________________________________________
consensus ATTCATTCCCTGAACGAATNTGAGTTCCAGAGCTTTCTGTAT
 
. : . : . : . : . : . :
JMFS068A05+ TANTCATAGTATTGAAGAGGTTGGAAAATAAAATGGTTGATCCACCACTATTGTACCGGA
                      ____________________________________________________________
consensus TANTCATAGTATTGAAGAGGTTGGAAAATAAAATGGTTGATCCACCACTATTGTACCGGA
 
. : . : . : . : . : . :
JMFS068A05+ GCTTCCAGTACCAATATTATCAGGAGCAACTACTTCCATATTCTCAGGCAGTCTTTCTCC
                      ____________________________________________________________
consensus GCTTCCAGTACCAATATTATCAGGAGCAACTACTTCCATATTCTCAGGCAGTCTTTCTCC
 
. : . : . : . : . : . :
JMFS068A05+ TTTATTATCTCCCTCAACACTTCTTGAATCGTCATCAAATAAAGAGCCCTCAAAATTAAC
JMFF006E02+ TGAATCGTCATCAAATAAAGAGCCCTCAAAATTAAC
JMSF012I17+ TCTCCCTCAACACTTCTTGAATCGTCATCAAATAAAGAGCCCTCAAAATTAAC
                      ____________________________________________________________
consensus TTTATTATCTCCCTCAACACTTCTTGAATCGTCATCAAATAAAGAGCCCTCAAAATTAAC
 
. : . : . : . : . : . :
JMFS068A05+ CTCATTTTCCCCAGATGAAACTCCAGTTTCAGTTCCAGAGTAATTAAATGTGGAAGCAAC
JMFF006E02+ CTCATTTTCCCCAGATGAAACTCCAGTTTCAGTTCCAGAGTAATTAAATGTGGAAGCAAC
JMSF012I17+ CTCATTTTCCCCAGATGAAACTCCAGTTTCAGTTCCAGAGTAATTAAATGTGGAAGCAAC
                      ____________________________________________________________
consensus CTCATTTTCCCCAGATGAAACTCCAGTTTCAGTTCCAGAGTAATTAAATGTGGAAGCAAC
 
. : . : . : . : . : . :
JMFS068A05+ TCTTTTCGTTGGATTTTGCAGCTTTTGTTGGTCAATATGTTTTGCAGAATTCACTGGCAA
JMFF006E02+ TCTTTTCGTTGGATTTTGCAGCTTTTGTTGGTCAATATGTTTTGCAGAATTCACTGGCAA
JMSF012I17+ TCTTTTCGTTGGATTTTGCAGCTTTTGTTGGTCAATATGTTTTGCAGAATTCACTGGCAA
                      ____________________________________________________________
consensus TCTTTTCGTTGGATTTTGCAGCTTTTGTTGGTCAATATGTTTTGCAGAATTCACTGGCAA
 
. : . : . : . : . : . :
JMFS068A05+ TCCATCTGGAAAATCTTCTGTCTCATTGGAAGATGAGTGAGGAAGGGATGCGCCGCAGAT
JMFF006E02+ TCCATCTGGAAAATCTTCTGTCTCATTGGAAGATGAGTGAGGAAGGGATGCGCCGCAGAT
JMSF012I17+ TCCATCTGGAAAATCTTCTGTCTCATTGGAAGATGAGTGAGGAAGGGATGCGCCGCAGAT
                      ____________________________________________________________
consensus TCCATCTGGAAAATCTTCTGTCTCATTGGAAGATGAGTGAGGAAGGGATGCGCCGCAGAT
 
. : . : . : . : . : . :
JMFS068A05+ AAAAATAGAGGATAATGAGCGTTTGGGGGTGCGGCTGCCACTAGGACGACGCGGGCGCGA
JMFF006E02+ AAAAATAGAGGATAATGAGCGTTTGGGGGTGCGGCTGCCACTAGGACGACGCGGGCGCGA
JMSF012I17+ AAAAATAGAGGATAATGAGCGTTTGGGGGTGCGGCTGCCACTAGGACGACGCGGGCGCGA
JMSF014I22+ AAAATAGAGGATAATGAGCGTTTGGGGGTGCGGCTGCCACTAGGACGACGCGGGCGCGA
                      ____________________________________________________________
consensus AAAAATAGAGGATAATGAGCGTTTGGGGGTGCGGCTGCCACTAGGACGACGCGGGCGCGA
 
. : . : . : . : . : . :
JMFS068A05+ GCCAAGACGGCTCTGGCTCGAACCCATCGGACCCAACACCCTCCGTGTCTGTGATCCTCT
JMFF006E02+ GCCAAGACGGCTCTGGCTCGAACCCATCGGACCCAACACCCTCCGTGTCTGTGATCCTCT
JMSF012I17+ GCCAAGACGGCTCTGGCTCGAACCCATCGGACCCAACACCCTCCGTGTCTGTGATCCTCT
JMSF014I22+ GCCAAGACGGCTCTGGCTCGAACCCATCGGACCCAACACCCTCCGTGTCTGTGATCCTCT
                      ____________________________________________________________
consensus GCCAAGACGGCTCTGGCTCGAACCCATCGGACCCAACACCCTCCGTGTCTGTGATCCTCT
 
. : . : . : . : . : . :
JMFS068A05+ TCTTCTAGTCGACGGCGGTGGCGGATAGGAGGGCCGCGGGGGCCCGGGGTGGCGGGAGAT
JMFF006E02+ TCTTCTAGTCGACGGCGGTGGCGGATAGGAGGGCCGCGGGGGCCCGGGGTGGCGGGAGAT
JMSF012I17+ TCTTCTAGTCGACGGCGGTGGCGGATAGGAGGGCCGCGGGGGCCCGGGGTGGCGGGAGAT
JMSF014I22+ TCTTCTAGTCGACGGCGGTGGCGGATAGGAGGGCCGCGGGGGCCCGGGGTGGCGGGAGAT
                      ____________________________________________________________
consensus TCTTCTAGTCGACGGCGGTGGCGGATAGGAGGGCCGCGGGGGCCCGGGGTGGCGGGAGAT
 
. : . : . : . : . : . :
JMFS068A05+ GGAATGGTGCTGATGGCGAAACAGAGGTG
JMFF006E02+ GGAATGGTGCTGATGGCGAAACAGAGGTGTCTCTGGGTGGCATCAAA
JMSF012I17+ GGAATGGTGCTGATGGCGAAACAGAGGTGTCTCTGGGTGGCATCAAA
JMSF014I22+ GGAATGGTGCTGATGGCGAAACAGAGGTGTCTCTGGGTGGCATCAAACACACATCTCCGA
                      ____________________________________________________________
consensus GGAATGGTGCTGATGGCGAAACAGAGGTGTCTCTGGGTGGCATCAAACACACATCTCCGA