Contig 003610:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009C17Sequence319003610 (6)ref|XP_006356541.1|1e-07PREDICTED: wound-induced basic protein-like [Solanum tuberosum]287003610 (6)ref|XP_006356541.1|9e-08PREDICTED: wound-induced basic protein-like [Solanum tuberosum]
JMFF046H04Sequence430003610 (6)ref|XP_007199244.1|2e-07hypothetical protein PRUPE_ppa022347mg, partial [Prunus persica] gb|EMJ00443.1| 382003610 (6)ref|XP_006356541.1|2e-07PREDICTED: wound-induced basic protein-like [Solanum tuberosum]
JMFN017C12Sequence370003610 (6)ref|XP_006356541.1|1e-07PREDICTED: wound-induced basic protein-like [Solanum tuberosum]
JMSF013P16Sequence397003610 (6)ref|XP_006356541.1|2e-07PREDICTED: wound-induced basic protein-like [Solanum tuberosum]675005165 (18)emb|CBI32689.3|2e-97unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF046H04- AGCAAAATCTGTCAAATCAATTGAAGA
JMFF046H04+ AGCAAAATCTGTCAAATCAATTGAAGA
JMSF013P16+ TTTTTTTTTTAGCAAAATCTGTCAAATCAATTGAAGA
                      ____________________________________________________________
consensus TTTTTTTTTTAGCAAAATCTGTCAAATCAATTGAAGA
 
. : . : . : . : . : . :
JMFF009C17+ TAGAAAACAGCCCATAGTTTA
rJMFF046H04- TTTAGTAGAAGAGTTGATCACATATACTGCAATTCAGGATAGAAAACAGCCCATAGTTTA
JMFF046H04+ TTTAGTAGAAGAGTTGATCACATATACTGCAATTCAGGATAGAAAACAGCCCATAGTTTA
JMFN017C12+ AGTAGAAGAGTTGATCACATATACTGCAATTCAGGATAGAAAACAGCCCATAGTTTA
JMSF013P16+ TTTAGTAGAAGAGTTGATCACATATACTGCAATTCAGGATAGAAAACAGCCCATAGTTTA
                      ____________________________________________________________
consensus TTTAGTAGAAGAGTTGATCACATATACTGCAATTCAGGATAGAAAACAGCCCATAGTTTA
 
. : . : . : . : . : . :
rJMFF009C17- TACTTGCAGCAGAATTTTCAACATCATGTTACAGCACACAGCAGATGCCAGATAGAGT
JMFF009C17+ CATACTTGCAGCAGAATTTTCAACATCATGTTACAGCACACAGCAGATGCCAGATAGAGT
rJMFF046H04- CATACTTGCAGCAGAATTTTCAACATCATGTTACAGCACACAGCAGATGCCAGATAGAGT
JMFF046H04+ CATACTTGCAGCAGAATTTTCAACATCATGTTACAGCACACAGCAGATGCCAGATAGAGT
JMFN017C12+ CATACTTGCAGCAGAATTTTCAACATCATGTTACAGCACACAGCAGATGCCAGATAGAGT
JMSF013P16+ CATACTTGCAGCAGAATTTTCAACATCATGTTACAGCACACAGCAGATGCCAGATAGAGT
                      ____________________________________________________________
consensus CATACTTGCAGCAGAATTTTCAACATCATGTTACAGCACACAGCAGATGCCAGATAGAGT
 
. : . : . : . : . : . :
rJMFF009C17- TCAAAACAGTTTATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCATACATCA
JMFF009C17+ TCAAAACAGTTTATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCATACATCA
rJMFF046H04- TCAAAACAGTTTATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCATACATCA
JMFF046H04+ TCAAAACAGTTTATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCATACATCA
JMFN017C12+ TCAAAACAGTTTATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCATACATCA
JMSF013P16+ TCAAAACAGTTTATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCATACATCA
                      ____________________________________________________________
consensus TCAAAACAGTTTATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCATACATCA
 
. : . : . : . : . : . :
rJMFF009C17- GGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTT
JMFF009C17+ GGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTT
rJMFF046H04- GGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTT
JMFF046H04+ GGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTT
JMFN017C12+ GGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTT
JMSF013P16+ GGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTT
                      ____________________________________________________________
consensus GGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTT
 
. : . : . : . : . : . :
rJMFF009C17- GGCTTTTGCTCTTCAGTTTTCCTCTTATCGGAACCGCCTCCTTTCTGGCTGAGAAACGAG
JMFF009C17+ GGCTTTTGCTCTTCAGTTTTCCTCTTATCGGAACCGCCTCCTTTCTGGCTGAGAAACGAG
rJMFF046H04- GGCTTTTGCTCTTCAGTTTTCCTCTTATCGGAACCGCCTCCTTTCTGGCTGAGAAACGAG
JMFF046H04+ GGCTTTTGCTCTTCAGTTTTCCTCTTATCGGAACCGCCTCCTTTCTGGCTGAGAAACGAG
JMFN017C12+ GGCTTTTGCTCTTCAGTTTTCCTCTTATCGGAACCGCCTCCTTTCTGGCTGAGAAACGAG
JMSF013P16+ GGCTTTTGCTCTTCAGTTTTCCTCTTATCGGAACCGCCTCCTTTCTGGCTGAGAAACGAG
                      ____________________________________________________________
consensus GGCTTTTGCTCTTCAGTTTTCCTCTTATCGGAACCGCCTCCTTTCTGGCTGAGAAACGAG
 
. : . : . : . : . : . :
rJMFF009C17- CGGAACAGCGGCGAGTTGACGTCGTAAATCATTGTCACTGTGCGAAGTT
JMFF009C17+ CGGAACAGCGGCGAGTTGACGTCGTAAATCATTGTCACTGTGCGAAGTT
rJMFF046H04- CGGAACAGCGGCGAGTTGACGTCGTAAATCATTGTCACTGTGCGAAGTTCGTCGT
JMFF046H04+ CGGAACAGCGGCGAGTTGACGTCGTAAATCAT
JMFN017C12+ CGGAACAGCGGCGAGTTGACGTCGTAAATCAT
JMSF013P16+ CGGAACAGCGGCGAGTTGACGTCGTAAATCATTGTCACTGTGCGAAGTTCGTCGTCCGCC
                      ____________________________________________________________
consensus CGGAACAGCGGCGAGTTGACGTCGTAAATCATTGTCACTGTGCGAAGTTCGTCGTCCGCC