Contig 003605:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN046I10Sequence591003605 (4)ref|XP_007133039.1|3e-11hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot
JMSF013G01Sequence252003605 (4)ref|XP_007133039.1|4e-11hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot700010090 (3)gb|KJB20616.1|1e-12hypothetical protein B456_003G156400 [Gossypium raimondii]
JMSF039N15Sequence649003605 (4)ref|XP_007133039.1|1e-10hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot841010090 (3)gb|KJB20616.1|2e-12hypothetical protein B456_003G156400 [Gossypium raimondii]
JMSF047O14Sequence695003605 (4)ref|XP_007133039.1|2e-10hypothetical protein PHAVU_011G146200g [Phaseolus vulgaris] gb|ESW05033.1| hypot716010090 (3)gb|KJB20616.1|3e-13hypothetical protein B456_003G156400 [Gossypium raimondii]

Alignment

This contig is upended


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JMSF047O14+                                    ATGTAAACAGCATGTTGGAGATCATAGTTGCTCCG
                      ____________________________________________________________
consensus                                      ATGTAAACAGCATGTTGGAGATCATAGTTGCTCCG
 
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JMSF047O14+           TTACTGCACCCCTTCACCATTTTCCTACCACAACCAAATCTATACAAACCGCCGCTGCAA
                      ____________________________________________________________
consensus             TTACTGCACCCCTTCACCATTTTCCTACCACAACCAAATCTATACAAACCGCCGCTGCAA
 
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JMSF047O14+           CTTCAATTCATTTCTAAAACCTCAGCAAAGTACAATTAAACTAAATAATAGAAACATATG
                      ____________________________________________________________
consensus             CTTCAATTCATTTCTAAAACCTCAGCAAAGTACAATTAAACTAAATAATAGAAACATATG
 
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JMSF047O14+           AAAATATATAATGTGAGATGGAAATGAATTCATGAAGCAAAGCTTATAGGGTGTGATTGG
JMFN046I10+                                                 AAAGCTTATAGGGTGTGATTGG
JMSF039N15+                                                 AAAGCTTATAGGGTGTGATTGG
                      ____________________________________________________________
consensus             AAAATATATAATGTGAGATGGAAATGAATTCATGAAGCAAAGCTTATAGGGTGTGATTGG
 
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JMSF047O14+           ACGCTGCCAGCAGAACCCAATCATCTCTGCCTTTCCATTCACACAGTGAAGCAAATTAAA
JMFN046I10+           ACGCTGCCAGCAGAACCCAATCATCTCTGCCTTTCCATTCACTCAGTGAAGCAAATTAAA
JMSF039N15+           ACGCTGCCAGCAGAACCCAATCATCTCTGCCTTTCCATTCACTCAGTGAAGCAAATTAAA
                      ____________________________________________________________
consensus             ACGCTGCCAGCAGAACCCAATCATCTCTGCCTTTCCATTCACTCAGTGAAGCAAATTAAA
 
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JMSF047O14+           GCTTCCAGGCTATATATGTCTCTGCTTCACATATAAGCCCCTCACCCCTTCAACAAAAAT
JMFN046I10+           GCTTCCAGGCTATATATGTCTCTGCTTCACATATAAGCCCCTCACCCCTTCAACAAAAAT
JMSF039N15+           GCTTCCAGGCTATATATGTCTCTGCTTCACATATAAGCCCCTCACCCCTTCAACAAAAAT
                      ____________________________________________________________
consensus             GCTTCCAGGCTATATATGTCTCTGCTTCACATATAAGCCCCTCACCCCTTCAACAAAAAT
 
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JMSF047O14+           TATACAATATCCCACATTGCAACCAGATGAGAAATATTTTCCCTTAATAACTCCCTAGCT
JMFN046I10+           TATACAATATCCCACATTGCAACCAGATGAGAAATATTTTCCCTTAATAACTCCCTAGCT
JMSF039N15+           TATACAATATCCCACATTGCAACCAGATGAGAAATATTTTCCCTTAATAACTCCCTAGCT
                      ____________________________________________________________
consensus             TATACAATATCCCACATTGCAACCAGATGAGAAATATTTTCCCTTAATAACTCCCTAGCT
 
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JMSF047O14+           AGAAGAATGGCTCGCTGGGCTTGGTAGCGCGAGCCTGTAACCCAAGCGGGAGCATTAAGA
JMFN046I10+           AGAAGAATGGCTCGCTGGGCTTGGTAGCGCGAGCCTGTAACCCAAGCGGGAGCATTAAGA
JMSF039N15+           AGAAGAATGGCTCGCTGGGCTTGGTAGCGCGAGCCTGTAACCCAAGCGGGAGCATTAAGA
JMSF013G01+                                                           GGAGCATTAAGA
                      ____________________________________________________________
consensus             AGAAGAATGGCTCGCTGGGCTTGGTAGCGCGAGCCTGTAACCCAAGCGGGAGCATTAAGA
 
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JMSF047O14+           TGGTGGAATAGTTTGGCTTGCCTTGAAGGTTGGGCTAGGGTTGCTATCTACTGTCCTGCC
JMFN046I10+           TGGTGGAATAGTTTGGCTTGCCTTGAAGGTTGGGCTAGGGTTGCTATTTACTGTCCTGCC
JMSF039N15+           TGGTGGAATAGTTTGGCTTGCCTTGAAGGTTGGGCTAGGGTTGCTATCTACTGTCCTGCC
JMSF013G01+           TGGTGGAATAGTTTGGCTTGCCTTGAAGGTTGGGCTAGGGTTGCTATCTACTGTCCTGCC
                      ____________________________________________________________
consensus             TGGTGGAATAGTTTGGCTTGCCTTGAAGGTTGGGCTAGGGTTGCTATCTACTGTCCTGCC
 
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JMSF047O14+           CGTTCCAAGTGGTGAGTTGTACTGTGGAGTCTCTCCGAAAGCGGAGGCTTCACTGTACTT
JMFN046I10+           CGTTCCAAGTGGTGAGTTGTACTGTGGAGTCTCTCCGAAAGCGGAGGCTTCACTGTCCTT
JMSF039N15+           CGTTCCAAGTGGTGAGTTGTACTGTGGAGTCTCTCCGAAAGCGGAGGCTTCACTGTACTT
JMSF013G01+           CGTTCCAAGTGGTGAGTTGTACTGTGGAGTCTCTCCGAAAGCGGAGGCTTCACTGTACTT
                      ____________________________________________________________
consensus             CGTTCCAAGTGGTGAGTTGTACTGTGGAGTCTCTCCGAAAGCGGAGGCTTCACTGTACTT
 
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JMSF047O14+           AGATCGGAGGGCACCACGTGAGGCTGGCTTCACAGAGCAGCGATAACCTCCTCCTCACTG
JMFN046I10+           AGATCGGAGGGCACCACGTGAGGCTGGCTTCACAGAGCAGCGATAACCTCCTCCTCACTG
JMSF039N15+           AGATCGGAGGGCACCACGTGAGGCTGGCTTCACAGAGCAGCGATAACCTCCTCCTCACTG
JMSF013G01+           AGATCGGAGGGCACCACGTGAGGCTGGCTTCACAGAGCAGCGATAACCTCCTCCTCACTG
                      ____________________________________________________________
consensus             AGATCGGAGGGCACCACGTGAGGCTGGCTTCACAGAGCAGCGATAACCTCCTCCTCACTG
 
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JMSF047O14+           TGGTGGAAGGATAACTGGCCGGTGCAACCTCAGTCCA                       
JMFN046I10+           TGGTGGAAGGATAACTGGCCGGTGCAACCTCA                            
JMSF039N15+           TGGTGGAAGGATAACTGGCCGGTGCAACCTCAGTCCA                       
JMSF013G01+           TGGTGGAAGGATAACTGGCCGGTGCAACCTCAGTCCATAAGCGCATCCGTATGACGTATC
                      ____________________________________________________________
consensus             TGGTGGAAGGATAACTGGCCGGTGCAACCTCAGTCCATAAGCGCATCCGTATGACGTATC