Contig 003602:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS015A12Sequence554003602 (6)
JMFS017C01Sequence617003602 (6)
JMFS102E12Sequence612003602 (6)
JMFS103D10Sequence586003602 (6)
JMSF013C07Sequence456003602 (6)720008555 (4)ref|XP_009612458.1|3e-51PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Nicotiana tomentosiformis]
JMSF019E04Sequence258003602 (6)687008555 (4)ref|XP_004231108.1|3e-76PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS103D10+               CAAATTCCATGCCCTCGAAAGGTTCAAGATCGAGGTCGCCAGTTGGAGTGTATATC
                      ____________________________________________________________
consensus                 CAAATTCCATGCCCTCGAAAGGTTCAAGATCGAGGTCGCCAGTTGGAGTGTATATC
 
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JMFS103D10+           CCACTGACAATAAGAGCATCACTACTATGTGCAGGAGAGCAGTTAGGCATGGTTTCAGCA
JMFS102E12+                  CAATAAGAGCATCACTACTATGTGCAGGAGAGCAGTTAGGCATGGTTTCAGCA
JMFS017C01+                                                              GTTTCAGCA
                      ____________________________________________________________
consensus             CCACTGACAATAAGAGCATCACTACTATGTGCAGGAGAGCAGTTAGGCATGGTTTCAGCA
 
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JMFS103D10+           TCGTCCATATTTTCTAGAATAACATCCCCATCTCCATCTTCGCTCCCGCCTCCACCTCTG
JMFS102E12+           TCGTCCATATTTTCTAGAATAACATCCCCATCTCCATCTTCGCTCCCGCCTCCACCTCTG
JMFS015A12+                          AGAATAACATCCCCATCTCCATCTTCGCTCCCGCCTCCACCTCTG
JMFS017C01+           TCGTCCATATTTTCTAGAATAACATCCCCATCTCCATCTTCGCTCCCGCCTCCACCTNTG
                      ____________________________________________________________
consensus             TCGTCCATATTTTCTAGAATAACATCCCCATCTCCATCTTCGCTCCCGCCTCCACCTCTG
 
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JMFS103D10+           ATGCCAATATCAAACTCAATTACTTGATTCTCCATCTTCACAAAGAAATTCAGTCTACAG
JMFS102E12+           ATGCCAATATCAAACTCAATTACTTGATTCTCCATCTTCACAAAGAAATTCAGTCTACAG
JMFS015A12+           ATGACAATATCAAACTCAATTACTTGATTCTCCATCTTCACAAAGAAATTCAGTCTACAG
JMFS017C01+           ATGCCAATATCAAACTCAATTACTTGATTCTCCATCTTCACAAAGAAATTCAGTCTACAG
                      ____________________________________________________________
consensus             ATGCCAATATCAAACTCAATTACTTGATTCTCCATCTTCACAAAGAAATTCAGTCTACAG
 
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JMFS103D10+           AACAGCGTTCTGCTTTTGTCTATTAAATATGAAGGTTCCTCTATGGCAAGCCAACTACCA
JMFS102E12+           AACAGCGTTCTGCTTTTGTCTATTAAATATGAAGGTTCCTCTATGGCAAGCCAACTACCA
JMFS015A12+           AACAGCGTTC---TTTTGTCTATTAAATATGAAGGTTCCTCTATGGCAAGCCAACTACCA
JMFS017C01+           AACAGCGTTC---TTTTGTCTATTAAATATGAAGGTTCCTCTATGGCAAGCCAACTACCA
                      ____________________________________________________________
consensus             AACAGCGTTCTGCTTTTGTCTATTAAATATGAAGGTTCCTCTATGGCAAGCCAACTACCA
 
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JMFS103D10+           AACTTTAGTGTACAAGATCTTTTTTGAGATGTTTTCAAACCTAGGCCTACTTATGAGAGA
JMFS102E12+           AACTTTAGTGTACAAGATCTTTTTTGAGATGTTTTCAAACCTAGGCCTACTTATGAGAGA
JMFS015A12+           AACTTTAGTGTACAAGATCTTTTTTGAGATGTTTTCAAACCTAGGCCTACTTATGAGAGA
JMFS017C01+           AACTTTAGTGTACAAGATCTTTTTTGAGATGTTTTCAAACCTAGGCCTACTTATGAGAGA
JMSF013C07+                                   TGAGATGTTTTCAAACCTAGGCCTACTTATGAGAGA
                      ____________________________________________________________
consensus             AACTTTAGTGTACAAGATCTTTTTTGAGATGTTTTCAAACCTAGGCCTACTTATGAGAGA
 
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JMFS103D10+           GATGCAAGGAGGAAGACATCAGCTCCTCCATAGCTAAGGGATCTAAGCTCGTTATAGTCC
JMFS102E12+           GATGCAAGGAGGAAGACATCAGCTCCTCCATAGCTAAGGGATCTAAGCTCGTTATAGTCC
JMFS015A12+           GATGCAAGGAGGAAGACATCAGCTCCTCCATAGCTAAGGGATCTAAGCTCGTTATAGTCC
JMFS017C01+           GATGCAAGGAGGAAGACATCAGCTCCTCCATAGCTAAGGGATCTAAGCTCGTTATAGTCC
JMSF013C07+           GATGCAAGGAGGAAGACATCAGCTCCTCCATAGCTAAGGGATCTAAGCTCGTTATAGTCC
                      ____________________________________________________________
consensus             GATGCAAGGAGGAAGACATCAGCTCCTCCATAGCTAAGGGATCTAAGCTCGTTATAGTCC
 
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JMFS103D10+           TCTCGTCCTAAATCACTACTACAGAATAGCATGGGCTACTCGGCTAGTACTCCGAGCCAA
JMFS102E12+           TCTCGTCCTAAATCACTACTACAGAATAGCATGGGCTACTCGGCTAGTACTCCGAGCCAA
JMFS015A12+           TCTCGTCCTAAATCACTACTACAGAATAGCATGGGCTACTCGGCTAGTACTCCGAGCCAA
JMSF019E04+                                                               CGAGCCAN
JMFS017C01+           TCTCGTCCTAAATCACTACTACAGAATAGCATGGGCTACTCGGCTAGTACTCCGAGCCAA
JMSF013C07+           TCTCGTCCTAAATCACTACTACAGAATAGCATGGGCTACTCGGCTAGTACTCCGAGCCAA
                      ____________________________________________________________
consensus             TCTCGTCCTAAATCACTACTACAGAATAGCATGGGCTACTCGGCTAGTACTCCGAGCCAA
 
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JMFS103D10+           CAAACGGAAGCAAACGAGCACTTAAAATTGTTCTTTTACGGAATATACTTGAGAGCAACT
JMFS102E12+           CAAACGGAAGCAAACGAGCACTTAAAATTGTTCTTTTACGGAATATACTTGAGAGCAACT
JMFS015A12+           CAAACGGAAGCAAACGAGCACTTAAAATTGTTCTTTTACGGAATATACTTGAGAGCAACT
JMSF019E04+           CAAACGGAAGCAAACGAGCACTTAAAATTGTTCTTTTACGGAATATACTTGAGAGCAACT
JMFS017C01+           CAAACGGAAGCAAACGAGCACTTAAAATTGTTCTTTTACGGAATATACTTGAGAGCAACT
JMSF013C07+           CAAACGGAAGCAAACGAGCACTTAAAATTGTTCTTTTACGGAATATACTTGAGAGCAACT
                      ____________________________________________________________
consensus             CAAACGGAAGCAAACGAGCACTTAAAATTGTTCTTTTACGGAATATACTTGAGAGCAACT
 
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JMFS103D10+           TTTATGAATGGGTGATTTTGTCATCCCCTCTGGCTCAAAACCCTAGCAAA          
JMFS102E12+           TTTATGAATGGGTGATTTTGTCATCCCCTCTGGCTCAAAACCCTAGCAAAGAGATTATAG
JMFS015A12+           TTTATGAATGGGTGATTTTGTCATCCCCTCTGGCTCAAAACCCTAGCAAAGAGATTATAG
JMSF019E04+           TTTATGAATGGGTGATTTTGTCATCCCCTCTGGCTCAAAACCCTAGCAAAGAGATTATAG
JMFS017C01+           TTTATGAATGGGTGATTTTGTCATCCCCTCTGGCTCAAAACCCTAGCAAAGAGATTATAG
JMSF013C07+           TTTATGAATGGGTGATTTTGTCATCCCCTCTGGCTCAAAACCCTAGCAAAGAGATTATAG
                      ____________________________________________________________
consensus             TTTATGAATGGGTGATTTTGTCATCCCCTCTGGCTCAAAACCCTAGCAAAGAGATTATAG
 
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JMFS102E12+           AGTGGAGCGGAGATCTTTGAGACTACGAGTGAAACAAAATGAATTCAAGAAAAGAGGGAG
JMFS015A12+           AGTGGAGCGGAGATCTTTGAGACTACGAGTGAAACAAAATGAATTCAAGAAAAGAGGGAG
JMSF019E04+           AGTGGAGCGGAGATCTTTGAGACTACGAGTGAAACAAAATGAATTCAAGAAAAGAGGGAG
JMFS017C01+           AGTGGAGCGGAGATCTTTGAGACTACGAGTGAAACAAAATGAATTCAAGAAAAGAGGGAG
JMSF013C07+           AGTGGAGCGGAGATCTTTGAGACTACGAGTGAAACAAAATGAATTCAAGAAAAGAGGGAG
                      ____________________________________________________________
consensus             AGTGGAGCGGAGATCTTTGAGACTACGAGTGAAACAAAATGAATTCAAGAAAAGAGGGAG
 
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JMFS102E12+           TGGGGAGAGATGACCTGAG                                         
JMFS015A12+           TGGGGAGAGATGACCTGAGTTCTTACAATGCA                            
JMSF019E04+           TGGGGAGAGATGACCTGAGTTCTTACAATGCACCGTAGCCGCCGAGAGAAGAGAGATGAT
JMFS017C01+           TGGGGAGAGATGACCTGAGTTCTTACAATGCACCGTAGCCGCCGAGAGAAGAGAGATGAT
JMSF013C07+           TGGGGAGAGATGACCTGAGTTCTTACAATGCACCGTAGCCGCCGAGAGAAGAGAGATGAT
                      ____________________________________________________________
consensus             TGGGGAGAGATGACCTGAGTTCTTACAATGCACCGTAGCCGCCGAGAGAAGAGAGATGAT
 
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JMSF019E04+           GACTGATCT                                                   
JMFS017C01+           GACTGATCT                                                   
JMSF013C07+           GACTGATCTGTGGGACACGGAGCGAGTTCGTTAGACAACGAGCGAAAGGGCGGAGAGGCC
                      ____________________________________________________________
consensus             GACTGATCTGTGGGACACGGAGCGAGTTCGTTAGACAACGAGCGAAAGGGCGGAGAGGCC