Contig 003601:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013B11Sequence501003601 (2)gb|KDO36325.1|7e-33hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]727005641 (2)ref|XP_009598779.1|5e-111PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot
JMSF023A19Sequence391003601 (2)gb|KDO36325.1|2e-49hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]723005641 (2)ref|XP_009598779.1|6e-109PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot

Alignment

This contig is upended


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JMSF013B11+                                                  TGAAGCAANCCACACAGACCC
                      ____________________________________________________________
consensus                                                    TGAAGCAANCCACACAGACCC
 
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JMSF013B11+           ATCAAGTCCCCAGCCCATATAAAGTGGCGTAATACCAATAGCATCCCTGGCAGCAATGAA
                      ____________________________________________________________
consensus             ATCAAGTCCCCAGCCCATATAAAGTGGCGTAATACCAATAGCATCCCTGGCAGCAATGAA
 
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JMSF023A19+            CATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
JMSF013B11+           ACATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
                      ____________________________________________________________
consensus             ACATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
 
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JMSF023A19+           GGATCAATAANTGGTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
JMSF013B11+           GGATCAATAATTGCTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
                      ____________________________________________________________
consensus             GGATCAATAATTGGTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
 
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JMSF023A19+           CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
JMSF013B11+           CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
                      ____________________________________________________________
consensus             CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
 
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JMSF023A19+           GCCTGAGAGTTGTCTGTGCAACCGAACACTGCAAGTATTCCACACATGGCGGCGCCTCTC
JMSF013B11+           GCCTGAGAGTTGTCTGTGCAACCGAAAACTGCAAGTATTCCACACATGGCGGCGCCTCTC
                      ____________________________________________________________
consensus             GCCTGAGAGTTGTCTGTGCAACCGAACACTGCAAGTATTCCACACATGGCGGCGCCTCTC
 
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JMSF023A19+           TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATACGCTGT
JMSF013B11+           TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATATGCTGT
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATATGCTGT
 
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JMSF023A19+           CTGAATAG                                                    
JMSF013B11+           CTGAATAGGACCTATGGGAGAGAAGAGATAGGTTGGAATGAAATGGAAGTGGAGGCTGGA
                      ____________________________________________________________
consensus             CTGAATAGGACCTATGGGAGAGAAGAGATAGGTTGGAATGAAATGGAAGTGGAGGCTGGA
 
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JMSF013B11+           GGCTGCTGAGAGCTGAGCCGCCCGCTATGAGCCTTTACAAACTGGTGGCTTGACCCCCCC
                      ____________________________________________________________
consensus             GGCTGCTGAGAGCTGAGCCGCCCGCTATGAGCCTTTACAAACTGGTGGCTTGACCCCCCC