Contig 003598:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS047H10Sequence610003598 (2)ref|XP_009796990.1|2e-62PREDICTED: tetrahydrocannabinolic acid synthase-like [Nicotiana sylvestris]
JMSF012M18Sequence444003598 (2)ref|XP_009796990.1|1e-35PREDICTED: tetrahydrocannabinolic acid synthase-like [Nicotiana sylvestris]740016046ref|XP_009627147.1|5e-112PREDICTED: tetrahydrocannabinolic acid synthase-like [Nicotiana tomentosiformis

Alignment

This contig is upended


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JMFS047H10+                                              CAGCATGGCACCATACGCGCCTCCA
                      ____________________________________________________________
consensus                                                CAGCATGGCACCATACGCGCCTCCA
 
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JMFS047H10+           GTTATGTGCCCTCCGATTCCCAAGCTGACGCAATTCCCCGCCGGAAAACCAAGATTCTTG
                      ____________________________________________________________
consensus             GTTATGTGCCCTCCGATTCCCAAGCTGACGCAATTCCCCGCCGGAAAACCAAGATTCTTG
 
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JMFS047H10+           CTTTTTTCCGCAACTCTGTAATACACTTCTCCATTGGTAGCGCCGGCCTGGACCCAAACA
                      ____________________________________________________________
consensus             CTTTTTTCCGCAACTCTGTAATACACTTCTCCATTGGTAGCGCCGGCCTGGACCCAAACA
 
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JMFS047H10+           CTGTTATCCTCAACATCAACTTTAATTCCCCGGAGCTTAGCCAAATCAATCACGACAAAG
JMSF012M18+                                               TTAGCCAAATCAATCACGACAAAG
                      ____________________________________________________________
consensus             CTGTTATCCTCAACATCAACTTTAATTCCCCGGAGCTTAGCCAAATCAATCACGACAAAG
 
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JMFS047H10+           GGCGCCGGAGACTCCATGTCCGACGTGTAGGATAAGCCTTCGAAGTCATGGCCGCCGCTG
JMSF012M18+           GGCGCCGGAGACTCCATGTCCGACGTGTAGGATAAGCCTTCGAAGTCATGGCCGCCGCTG
                      ____________________________________________________________
consensus             GGCGCCGGAGACTCCATGTCCGACGTGTAGGATAAGCCTTCGAAGTCATGGCCGCCGCTG
 
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JMFS047H10+           CGGACTCTGAGCTGAACGCCGGCTTCTTTAGTGCAAACGACGGCGGCTTGGACGTGGGAT
JMSF012M18+           CGGACTCTGAGCTGAACGCCGGCTTCTTTAGTGCAAACGACGGCGGCTTGGACGTGGGAT
                      ____________________________________________________________
consensus             CGGACTCTGAGCTGAACGCCGGCTTCTTTAGTGCAAACGACGGCGGCTTGGACGTGGGAT
 
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JMFS047H10+           TCAGTCAGCGGTGTGAATATGAGCAGCGGCTTGGGCGCGGAGGGCACCAGGAAGACGAGA
JMSF012M18+           TCAGTCAGCGGTGTGAATATGAGCAGCGGCTTGGGCGCGGAGGGCACCAGGAAGACGAGA
                      ____________________________________________________________
consensus             TCAGTCAGCGGTGTGAATATGAGCAGCGGCTTGGGCGCGGAGGGCACCAGGAAGACGAGA
 
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JMFS047H10+           TTTTGGACGGTGGATTGGAGAACGGAGTTGAAAGATGAAGCATTTGTAGTAGTGGAGAAG
JMSF012M18+           TTTTGGACGGTGGATTGGAGAACGGAGTTGAAAGATGAAGCATTTGTAGTAGTGGAGAAG
                      ____________________________________________________________
consensus             TTTTGGACGGTGGATTGGAGAACGGAGTTGAAAGATGAAGCATTTGTAGTAGTGGAGAAG
 
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JMFS047H10+           AAAGCGGTGGAGAATGGAATGGAGGTATGGGAATGGAGAGAAACGCATTTGTAGAATTGA
JMSF012M18+           AAAGCGGTGGAGAATGGAATGGAGGTATGGGAATGGAGAGAAACGCATTTGTAGAATTGA
                      ____________________________________________________________
consensus             AAAGCGGTGGAGAATGGAATGGAGGTATGGGAATGGAGAGAAACGCATTTGTAGAATTGA
 
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JMFS047H10+           TGTTGAATCGAAAGAGAAACCGCCCATGGCGAAAAGGTTAGGAAAGTGAATAAAATTGAT
JMSF012M18+           TGTTGAATCGAAAGAGAAACCGCCCATGGCGAAAAGGTTAGGAAAGTGAATAAAATTGAT
                      ____________________________________________________________
consensus             TGTTGAATCGAAAGAGAAACCGCCCATGGCGAAAAGGTTAGGAAAGTGAATAAAATTGAT
 
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JMFS047H10+           AGAATTATTGGGGAACTCCAAGAAGCCATAGCTATATGCAGACTG               
JMSF012M18+           AGAATTATTGGGGAACTCCAAGAAGCCATAGCTATATGCAGACTGCTCTGCATTTTCTTC
                      ____________________________________________________________
consensus             AGAATTATTGGGGAACTCCAAGAAGCCATAGCTATATGCAGACTGCTCTGCATTTTCTTC