Contig 003597:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029L02Sequence427003597 (3)dbj|BAO57281.1|4e-11protein kinase family protein [Ipomoea nil]798011008 (8)dbj|BAO57281.1|3e-138protein kinase family protein [Ipomoea nil]
JMFF041N19Sequence641003597 (3)dbj|BAO57281.1|1e-70protein kinase family protein [Ipomoea nil]642011008 (8)dbj|BAO57281.1|2e-92protein kinase family protein [Ipomoea nil]
JMSF012M06Sequence465003597 (3)dbj|BAO57281.1|2e-25protein kinase family protein [Ipomoea nil]773011008 (8)dbj|BAO57281.1|8e-134protein kinase family protein [Ipomoea nil]

Alignment

This contig is upended


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JMFF041N19+                           TACCGCGATAAACCGTGCCATAGGTGCCTTGAGCAATAAGATAC
                      ____________________________________________________________
consensus                             TACCGCGATAAACCGTGCCATAGGTGCCTTGAGCAATAAGATAC
 
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JMFF041N19+           CTAATCTCCAATTTCAAAGGATCAATCTCCCAGTCCTCCTTGGGCCTCTGGACTTGATGT
                      ____________________________________________________________
consensus             CTAATCTCCAATTTCAAAGGATCAATCTCCCAGTCCTCCTTGGGCCTCTGGACTTGATGT
 
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JMFF041N19+           TCTACACTCCTAGACCAAACCCGACTCAGATGCTTCTCCAATTGAACATCCAAGCTTTTG
                      ____________________________________________________________
consensus             TCTACACTCCTAGACCAAACCCGACTCAGATGCTTCTCCAATTGAACATCCAAGCTTTTG
 
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JMFF041N19+           AGATCAATCTTATCAGCCCTAAAAATCATATCTTTGCTAGGGCTCTTCCCTGCCATATTT
JMFF029L02+                                                              GCCATATTT
JMSF012M06+                         AGCCCTAAAAATCATATCTTTGCTAGGGCTCTTCCCTGCCATATTT
                      ____________________________________________________________
consensus             AGATCAATCTTATCAGCCCTAAAAATCATATCTTTGCTAGGGCTCTTCCCTGCCATATTT
 
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JMFF041N19+           CCATCACTAATACT-CCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
JMFF029L02+           CCATCACTAATACTCCCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
JMSF012M06+           CCATCACTAATACT-CCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
                      ____________________________________________________________
consensus             CCATCACTAATACT-CCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
 
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JMFF041N19+           TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
JMFF029L02+           TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
JMSF012M06+           TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
                      ____________________________________________________________
consensus             TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
 
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JMFF041N19+           TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
JMFF029L02+           TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
JMSF012M06+           TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
                      ____________________________________________________________
consensus             TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
 
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JMFF041N19+           AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
JMFF029L02+           AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
JMSF012M06+           AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
                      ____________________________________________________________
consensus             AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
 
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JMFF041N19+           GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
JMFF029L02+           GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
JMSF012M06+           GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
                      ____________________________________________________________
consensus             GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
 
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JMFF041N19+           GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
JMFF029L02+           GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
JMSF012M06+           GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
                      ____________________________________________________________
consensus             GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
 
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JMFF041N19+           CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAA    
JMFF029L02+           CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAA    
JMSF012M06+           CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAAACCC
                      ____________________________________________________________
consensus             CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAAACCC