Contig 003594:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023C24Sequence493003594 (13)emb|CDP05334.1|4e-83unnamed protein product [Coffea canephora]
JMFF024I10Sequence435003594 (13)emb|CAN76413.1|1e-81hypothetical protein VITISV_043812 [Vitis vinifera]747011101 (9)ref|XP_006357255.1|2e-112PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum
JMFF026F20Sequence614003594 (13)emb|CDP05334.1|2e-118unnamed protein product [Coffea canephora]759011101 (9)ref|XP_009786961.1|3e-97PREDICTED: conserved oligomeric Golgi complex subunit 7 [Nicotiana sylvestris]
JMFF030J06Sequence383003594 (13)emb|CAN76413.1|8e-69hypothetical protein VITISV_043812 [Vitis vinifera]723011101 (9)ref|XP_006357255.1|5e-107PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum
JMFF031I22Sequence562003594 (13)emb|CDP05334.1|2e-101unnamed protein product [Coffea canephora]774011101 (9)ref|XP_006357255.1|2e-113PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum
JMFS068E10Sequence374003594 (13)emb|CDP05334.1|3e-60unnamed protein product [Coffea canephora]
JMFS086B09Sequence374003594 (13)emb|CDP05334.1|3e-60unnamed protein product [Coffea canephora]
JMSF004G17Sequence440003594 (13)emb|CDP05334.1|2e-71unnamed protein product [Coffea canephora]
JMSF011O01Sequence310003594 (13)emb|CDP05334.1|4e-47unnamed protein product [Coffea canephora]753011101 (9)ref|XP_006357255.1|1e-115PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum
JMSF012F09Sequence236003594 (13)emb|CDP05334.1|2e-23unnamed protein product [Coffea canephora]789011101 (9)ref|XP_009786961.1|6e-97PREDICTED: conserved oligomeric Golgi complex subunit 7 [Nicotiana sylvestris]
JMSF020D16Sequence676003594 (13)ref|XP_004238762.1|1e-134PREDICTED: conserved oligomeric Golgi complex subunit 7 [Solanum lycopersicum] 757011101 (9)ref|XP_006357255.1|4e-116PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum
JMSF024K24Sequence695003594 (13)emb|CAN76413.1|5e-130hypothetical protein VITISV_043812 [Vitis vinifera]771011101 (9)ref|XP_006357255.1|1e-109PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum
JMSF045B23Sequence140003594 (13)gb|KDP22425.1|3e-04hypothetical protein JCGZ_26256 [Jatropha curcas]744011101 (9)ref|XP_006357255.1|7e-110PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum

Alignment

This contig is upended


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JMSF024K24+                              AAGATAAAGCAGCAATTCATCATAAAAACTGGGAAGCCAAC
                      ____________________________________________________________
consensus                                AAGATAAAGCAGCAATTCATCATAAAAACTGGGAAGCCAAC
 
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JMSF024K24+           GTGAAAATGAAATCGGAGATGAATTCAGTTGCAACTCATTAGCACTTGAGAGCCTTTCTA
                      ____________________________________________________________
consensus             GTGAAAATGAAATCGGAGATGAATTCAGTTGCAACTCATTAGCACTTGAGAGCCTTTCTA
 
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JMSF024K24+           CTTCATTCTTCTCATTTGAAACCTTATTTGCCTGTTGCCTCAACTCAAAATCTTCCCAAA
                      ____________________________________________________________
consensus             CTTCATTCTTCTCATTTGAAACCTTATTTGCCTGTTGCCTCAACTCAAAATCTTCCCAAA
 
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JMSF024K24+           GATGTTTTATAGGCTTGAGGTGGACCTTTGAGTATTGCAGTTCTAATGACTTGAATCTCC
JMSF020D16+                                       TGAGTATTGCAGTTCTAATGACNTGAATCTCC
                      ____________________________________________________________
consensus             GATGTTTTATAGGCTTGAGGTGGACCTTTGAGTATTGCAGTTCTAATGACTTGAATCTCC
 
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JMSF024K24+           CAATTCTATTGAGAATACTCCTCATTTCTTGGGCAACATCAACCTTCCGATTGCTTAATG
JMFF024I10+                                                               GCTTAATG
JMSF020D16+           CAATTCTATTGAGAATACTCCTCATTTCTTGGGCAACATCAACCTTCCGATTGCTTAATG
JMFF026F20+                                                               GCTTAATG
                      ____________________________________________________________
consensus             CAATTCTATTGAGAATACTCCTCATTTCTTGGGCAACATCAACCTTCCGATTGCTTAATG
 
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JMSF024K24+           CATCTGTCAAGCGAGGTTGCACCATCGAGTCTAGTCTATCTTCTAAAACTTCAAGTTGTT
JMFF024I10+           CATCTGTCAAGCGAGGTTGCACCATCGAGTCTAGTCTATCTTCTAAAACTTCAAGTTGTT
JMFF030J06+                                                      TAAAACTTCAAGTTGTT
JMSF020D16+           CATCTGTCAAGCGAGGTTGCACCATCGAGTCTAGTCTATCTTCTAAAACTTCAAGTTGTT
JMFF026F20+           CATCTGTCAAGCGAGGTTGCACCATCGAGTCTAGTCTATCTTCTAAAACTTCAAGTTGTT
                      ____________________________________________________________
consensus             CATCTGTCAAGCGAGGTTGCACCATCGAGTCTAGTCTATCTTCTAAAACTTCAAGTTGTT
 
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JMSF024K24+           TCCTAATATTAGCAAATTCAGCAACCTCACCAACAGCAGACAAGCAGTGCCTCATGTTTG
JMFF024I10+           TCCTAATATTAGCAAATTCAGCAACCTCACCAACAGCAGACAAGCAGTGCCTCATGTTTG
JMFF030J06+           TCCTAATATTAGCAAATTCAGCAACCTCACCAACAGCAGACAAGCAGTGCCTCATGTTTG
JMSF020D16+           TCCTAATATTAGCAAATTCAGCAACCTCACCAACAGCAGACAAGCAGTGCCTCATGTTTG
JMFF026F20+           TCCTAATATTAGCAAATTCAGCAACCTCACCAACAGCAGACAAGCAGTGCCTCATGTTTG
JMFF031I22+             CTAATATTAGCAAATTCAGCAACCTCACCAACAGCAGACAAGCAGTGCCTCATGTTTG
                      ____________________________________________________________
consensus             TCCTAATATTAGCAAATTCAGCAACCTCACCAACAGCAGACAAGCAGTGCCTCATGTTTG
 
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JMSF024K24+           CCAGTGTCTCTGCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
JMFF024I10+           CCAGTGTCTCTGCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
JMFF030J06+           CCAGTGTCTCTGCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
JMSF020D16+           CCAGTGTCTCTGCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
JMFF026F20+           CCAGTGTCTCTGCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
JMFF031I22+           CCAGTGTCTCTGCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
JMFF023C24+                      GCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
                      ____________________________________________________________
consensus             CCAGTGTCTCTGCAGCACGTGGAAGATCACCACTCGAAAATACATCCTCCACAGTTGAGC
 
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JMSF024K24+           TTAATTGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
JMFF024I10+           TTAATTGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
JMFF030J06+           TTAATTGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
JMSF020D16+           TTAATTGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
JMFF026F20+           TTAATTGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
JMFF031I22+           TTAATTGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
JMFS068E10+                                                                 TTCGCT
JMFS086B09+                                                                 TTCGCT
JMFF023C24+           TTAATTGAGCCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
JMSF004G17+                TGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
                      ____________________________________________________________
consensus             TTAATTGAGTCAAACCAGCTGCATCCTGCAATGTCTCGTAAGCAGCTTCCATTCTTCGCT
 
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JMSF024K24+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMFF024I10+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMFF030J06+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMSF020D16+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMFF026F20+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMFF031I22+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMFS068E10+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMSF045B23+                                                  CAGATGATCCCTCTGCCTTTC
JMFS086B09+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMSF011O01+                                                                    TTC
JMFF023C24+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
JMSF004G17+           TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
                      ____________________________________________________________
consensus             TGACAGTATCGACTTTTGCTAGTGTAGCTACGGACTCTGCAGATGATCCCTCTGCCTTTC
 
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JMSF024K24+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMFF024I10+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMFF030J06+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMSF020D16+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMFF026F20+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMFF031I22+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMFS068E10+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMSF045B23+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGA   
JMFS086B09+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMSF011O01+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMFF023C24+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
JMSF004G17+           TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
                      ____________________________________________________________
consensus             TGAGTTTTTGGAGGATGGAAGAGACGGAGGAGCGGAGCGAGAGGGCGTCATCGCGGAGTC
 
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JMSF024K24+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCT      
JMFF024I10+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMFF030J06+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMSF020D16+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMFF026F20+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMFF031I22+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMFS068E10+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMFS086B09+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMSF011O01+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMFF023C24+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
JMSF004G17+           GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
                      ____________________________________________________________
consensus             GGATAACGTCACGCGTGGCGCGGGGGACGCGGTGGAGAGCAGATGCGCTGAGCTCCTCGA
 
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JMFF024I10+           GGGAGA                                                      
JMFF030J06+           GGGAGA                                                      
JMSF020D16+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMFF026F20+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMFF031I22+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMFS068E10+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMFS086B09+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMSF011O01+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMFF023C24+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMSF004G17+           GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
JMSF012F09+               GACGGCGATCTCNTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
                      ____________________________________________________________
consensus             GGGAGACGGCGATCTCCTCCGACGCCATCTGGAGCTTCATTTCCAGATCCACCAGGTGCT
 
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JMSF020D16+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMFF026F20+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMFF031I22+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMFS068E10+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMFS086B09+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMSF011O01+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMFF023C24+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMSF004G17+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
JMSF012F09+           TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
                      ____________________________________________________________
consensus             TGTCCAGCGGGTCCTGCGGGTGCCGCGACTGGCACGCCCCGTTTATCCATTGCTTGGGGT
 
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JMSF020D16+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTT                 
JMFF026F20+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
JMFF031I22+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
JMFS068E10+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
JMFS086B09+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
JMSF011O01+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
JMFF023C24+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
JMSF004G17+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
JMSF012F09+           CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
                      ____________________________________________________________
consensus             CGAACTTCTCATCGGAGAAGGAGCTCAGATCCACCATCATCTTGCCCGGATCACACTACC
 
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JMFF026F20+           GAATTC                                                      
JMFF031I22+           GAATTCACTCATCAACTGTTTAC                                     
JMFS068E10+           GAAT                                                        
JMFS086B09+           GAAT                                                        
JMSF011O01+           GAATTC                                                      
JMFF023C24+           GAATTCACTCATCAACGGTTTAC                                     
JMSF004G17+           GAATTCACTCATCAACTGTTTAC                                     
JMSF012F09+           GAATTCACTCATCAACTGTTTACTGTCTTCGCTGTTTCTCTGAATCCGTTAAACCAAGCC
                      ____________________________________________________________
consensus             GAATTCACTCATCAACTGTTTACTGTCTTCGCTGTTTCTCTGAATCCGTTAAACCAAGCC