| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS140B03 | Sequence | 641 | 003593 (6) | ref|XP_009606495.1| | 2e-101 | PREDICTED: pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028} [Nicotiana tome | |||||
| JMSF011F16 | Sequence | 245 | 003593 (6) | ref|XP_004243564.1| | 7e-20 | PREDICTED: pescadillo homolog [Solanum lycopersicum] | 720 | 013935 (6) | ref|XP_004243564.1| | 5e-81 | PREDICTED: pescadillo homolog [Solanum lycopersicum] |
| JMSF012E22 | Sequence | 234 | 003593 (6) | ref|XP_004243564.1| | 8e-16 | PREDICTED: pescadillo homolog [Solanum lycopersicum] | 793 | 013935 (6) | ref|XP_004243564.1| | 1e-98 | PREDICTED: pescadillo homolog [Solanum lycopersicum] |
| JMSF016F19 | Sequence | 243 | 003593 (6) | ref|XP_004243564.1| | 6e-20 | PREDICTED: pescadillo homolog [Solanum lycopersicum] | 757 | 013935 (6) | ref|XP_004243564.1| | 1e-85 | PREDICTED: pescadillo homolog [Solanum lycopersicum] |
| JMSF017F15 | Sequence | 535 | 003593 (6) | ref|XP_004243564.1| | 1e-72 | PREDICTED: pescadillo homolog [Solanum lycopersicum] | 731 | 013935 (6) | ref|XP_004243564.1| | 2e-83 | PREDICTED: pescadillo homolog [Solanum lycopersicum] |
| JMSF040J24 | Sequence | 672 | 003593 (6) | ref|XP_009606495.1| | 1e-105 | PREDICTED: pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028} [Nicotiana tome | 862 | 013935 (6) | ref|XP_004243564.1| | 1e-106 | PREDICTED: pescadillo homolog [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS140B03+ CC
JMSF040J24+ CCTGATAATATATTCC
____________________________________________________________
consensus CCTGATAATATATTCC
. : . : . : . : . : . :
JMFS140B03+ TTTTACAGATATAAATGTTTTTCGCAGTTTGTGGGTGCGAGAAACATAAGCTTGCCACTC
JMSF040J24+ TTTTACAGATATAAATGTTTTTCGCAGTTTGTGGGTGCGAGAAACATAAGCTTGCCACTC
____________________________________________________________
consensus TTTTACAGATATAAATGTTTTTCGCAGTTTGTGGGTGCGAGAAACATAAGCTTGCCACTC
. : . : . : . : . : . :
JMFS140B03+ ATGACTTAACCTTCGACAGTTATGAATGCGGTTTACTGGAATATTTTCCCTTTCTACAGC
JMSF017F15+ TACAGC
JMSF040J24+ ATGACTTAACCTTCGACAGTTATGAATGCGGTTTACTGGAATATTTTCCCTTTCTACAGC
____________________________________________________________
consensus ATGACTTAACCTTCGACAGTTATGAATGCGGTTTACTGGAATATTTTCCCTTTCTACAGC
. : . : . : . : . : . :
JMFS140B03+ AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
JMSF017F15+ AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
JMSF040J24+ AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
____________________________________________________________
consensus AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
. : . : . : . : . : . :
JMFS140B03+ AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
JMSF017F15+ AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
JMSF040J24+ AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
____________________________________________________________
consensus AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
. : . : . : . : . : . :
JMFS140B03+ CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
JMSF017F15+ CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
JMSF040J24+ CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
____________________________________________________________
consensus CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
. : . : . : . : . : . :
JMFS140B03+ ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
JMSF017F15+ ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
JMSF040J24+ ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
____________________________________________________________
consensus ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
. : . : . : . : . : . :
JMFS140B03+ TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
JMSF016F19+ GGGTCCCGTGGAAA
JMSF017F15+ TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
JMSF040J24+ TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
JMSF011F16+ CCGTGGAAA
____________________________________________________________
consensus TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
. : . : . : . : . : . :
JMFS140B03+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF016F19+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF017F15+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF040J24+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF011F16+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF012E22+ TTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
____________________________________________________________
consensus TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
. : . : . : . : . : . :
JMFS140B03+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF016F19+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF017F15+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF040J24+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF011F16+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF012E22+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
____________________________________________________________
consensus AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
. : . : . : . : . : . :
JMFS140B03+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF016F19+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF017F15+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF040J24+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF011F16+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF012E22+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
____________________________________________________________
consensus GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
. : . : . : . : . : . :
JMFS140B03+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTC
JMSF016F19+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF017F15+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF040J24+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF011F16+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF012E22+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTCGAGCCGCAAGTC
____________________________________________________________
consensus ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTCGAGCCGCAAGTC