Contig 003593:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS140B03Sequence641003593 (6)ref|XP_009606495.1|2e-101PREDICTED: pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028} [Nicotiana tome
JMSF011F16Sequence245003593 (6)ref|XP_004243564.1|7e-20PREDICTED: pescadillo homolog [Solanum lycopersicum]720013935 (6)ref|XP_004243564.1|5e-81PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF012E22Sequence234003593 (6)ref|XP_004243564.1|8e-16PREDICTED: pescadillo homolog [Solanum lycopersicum]793013935 (6)ref|XP_004243564.1|1e-98PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF016F19Sequence243003593 (6)ref|XP_004243564.1|6e-20PREDICTED: pescadillo homolog [Solanum lycopersicum]757013935 (6)ref|XP_004243564.1|1e-85PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF017F15Sequence535003593 (6)ref|XP_004243564.1|1e-72PREDICTED: pescadillo homolog [Solanum lycopersicum]731013935 (6)ref|XP_004243564.1|2e-83PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF040J24Sequence672003593 (6)ref|XP_009606495.1|1e-105PREDICTED: pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028} [Nicotiana tome862013935 (6)ref|XP_004243564.1|1e-106PREDICTED: pescadillo homolog [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS140B03+ CC
JMSF040J24+ CCTGATAATATATTCC
                      ____________________________________________________________
consensus CCTGATAATATATTCC
 
. : . : . : . : . : . :
JMFS140B03+ TTTTACAGATATAAATGTTTTTCGCAGTTTGTGGGTGCGAGAAACATAAGCTTGCCACTC
JMSF040J24+ TTTTACAGATATAAATGTTTTTCGCAGTTTGTGGGTGCGAGAAACATAAGCTTGCCACTC
                      ____________________________________________________________
consensus TTTTACAGATATAAATGTTTTTCGCAGTTTGTGGGTGCGAGAAACATAAGCTTGCCACTC
 
. : . : . : . : . : . :
JMFS140B03+ ATGACTTAACCTTCGACAGTTATGAATGCGGTTTACTGGAATATTTTCCCTTTCTACAGC
JMSF017F15+ TACAGC
JMSF040J24+ ATGACTTAACCTTCGACAGTTATGAATGCGGTTTACTGGAATATTTTCCCTTTCTACAGC
                      ____________________________________________________________
consensus ATGACTTAACCTTCGACAGTTATGAATGCGGTTTACTGGAATATTTTCCCTTTCTACAGC
 
. : . : . : . : . : . :
JMFS140B03+ AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
JMSF017F15+ AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
JMSF040J24+ AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
                      ____________________________________________________________
consensus AGGCAATGCAGCAAAAAGATGAACCATACTCAGACAATCATCCAAATCCCTCAACGCATC
 
. : . : . : . : . : . :
JMFS140B03+ AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
JMSF017F15+ AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
JMSF040J24+ AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
                      ____________________________________________________________
consensus AATGAATGTAGGGTACCTCTCTCGAATAAGCAAATCTAAATTATAGCCAGGCTTGCTAGA
 
. : . : . : . : . : . :
JMFS140B03+ CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
JMSF017F15+ CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
JMSF040J24+ CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
                      ____________________________________________________________
consensus CAATAGACGTTCAGCAAGATCCTTGTTCTTTTTTGACACAGCTTTCTTAACTTTTCTATC
 
. : . : . : . : . : . :
JMFS140B03+ ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
JMSF017F15+ ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
JMSF040J24+ ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
                      ____________________________________________________________
consensus ATAAGCCCGAATATCTCTGAACTTCTCAAGCAATGGCTCATATTTAAGGAACTTAATATC
 
. : . : . : . : . : . :
JMFS140B03+ TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
JMSF016F19+ GGGTCCCGTGGAAA
JMSF017F15+ TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
JMSF040J24+ TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
JMSF011F16+ CCGTGGAAA
                      ____________________________________________________________
consensus TTTTGTGTGATAATAGGTTTGATGATTTCCTTTCACCTTCTTCTTTGGGTCCCGTGGAAA
 
. : . : . : . : . : . :
JMFS140B03+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF016F19+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF017F15+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF040J24+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF011F16+ TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
JMSF012E22+ TTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
                      ____________________________________________________________
consensus TATACCTTTGAGGATGCATAGCTTCCTGAATAGTGATATGCTGATTTGGAGTTCCTTAAG
 
. : . : . : . : . : . :
JMFS140B03+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF016F19+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF017F15+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF040J24+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF011F16+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
JMSF012E22+ AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
                      ____________________________________________________________
consensus AGCTTTTGACCTAGTTATGTATCTGGAAGCGTTTCCTTCCTTTTTCTTGCCCGCAGGCCT
 
. : . : . : . : . : . :
JMFS140B03+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF016F19+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF017F15+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF040J24+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF011F16+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
JMSF012E22+ GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
                      ____________________________________________________________
consensus GAAGTGCTTAGGCATGGCTGCGGATTCGAGCTGTGAAGGAAGAGGGCGAGCCTCGACGGG
 
. : . : . : . : . : . :
JMFS140B03+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTC
JMSF016F19+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF017F15+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF040J24+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF011F16+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTC
JMSF012E22+ ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTCGAGCCGCAAGTC
                      ____________________________________________________________
consensus ACACGGGAGTACTTGAGGCAGATGAAGCTTCCGTTTTTCTGTCGGCTCGAGCCGCAAGTC