Contig 003586:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS071A12+                   AAGAAACTTGAGCCAGAGTTCTTTAGCCTCAGTGTCAGCTGGAAGACCAGAC
                      ____________________________________________________________
consensus                     AAGAAACTTGAGCCAGAGTTCTTTAGCCTCAGTGTCAGCTGGAAGACCAGAC
 
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JMFS071A12+           TTCTCATCGCCCCCAAAATAAGTGGCATAAAACCGATCAGCAGGCAGCTTATATACCTCT
JMFS070A10+                     CCCCAAAATAAGTGGCATANAACCGATCAGCAGGCAGCTTATATACCTCT
                      ____________________________________________________________
consensus             TTCTCATCGCCCCCAAAATAAGTGGCATAAAACCGATCAGCAGGCAGCTTATATACCTCT
 
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JMFS071A12+           GTGAGAAGTTCCCAAGCCCATTGAATGGCCTCTGTTTTGAAATAATCTCCGAAAGACCAA
JMFS070A10+           GTGAGAAGTTCCCAAGCCCATTGAATGGCCTCTGTTTTGAAATAATCTCCGAAAGACCAA
                      ____________________________________________________________
consensus             GTGAGAAGTTCCCAAGCCCATTGAATGGCCTCTGTTTTGAAATAATCTCCGAAAGACCAA
 
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JMFS071A12+           TTACCAAGCATCTCAAAGAAGGTATGGTGATAAGTGTCCTTGCCAACATCATCAAGATCA
JMFS070A10+           TTACCAAGCATCTCAAAGAAGGTATGGTGATAAGTGTCCTTGCCAACATCATCAAGATCA
                      ____________________________________________________________
consensus             TTACCAAGCATCTCAAAGAAGGTATGGTGATAAGTGTCCTTGCCAACATCATCAAGATCA
 
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JMFS071A12+           TTATGTTTCCCACCAGCTCTGATGCACTTCTGCGTATCACATGCGCGCTTCATTTTCCCC
JMFS070A10+           TTATGTTTCCCACCAGCTCTGATGCACTTCTGCGTATCACATGCGCGCTTCATTTTCCCC
                      ____________________________________________________________
consensus             TTATGTTTCCCACCAGCTCTGATGCACTTCTGCGTATCACATGCGCGCTTCATTTTCCCC
 
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JMFS071A12+           AATTCAGTGTTTGGATCCACAGTTCCTAAAAAGATAGGCTTGAACTGATTCATGCCTGCA
JMFS070A10+           AATTCAGTGTTTGGATCCACAGTTCCTAAAAAGATAGGCTTGAACTGATTCATGCCTGCA
                      ____________________________________________________________
consensus             AATTCAGTGTTTGGATCCACAGTTCCTAAAAAGATAGGCTTGAACTGATTCATGCCTGCA
 
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JMFS071A12+           TTGGCAAAGAGGAGGGTCGGGTCATTGTGAGGAACAACGGGGCTGGACTGGACACATTTG
JMFS070A10+           TTGGCAAAGAGGAGGGTCGGGTCATTGTGAGGAACAACGGGGCTGGACTGGACACATTTG
                      ____________________________________________________________
consensus             TTGGCAAAGAGGAGGGTCGGGTCATTGTGAGGAACAACGGGGCTGGACTGGACACATTTG
 
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JMFS071A12+           TGATCCTTGCTTTCGAAGAACTGGAGGAAAGTATCCCGGACCTTTCTGGCTGGCCACTCC
JMFS070A10+           TGATCCTTGCTTTCGAAGAACTGGAGGAAAGTATCCCGGACCTTTCTGGCTGGCCACTCC
JMSF011B24+                              ACTGGAGGAAAGTATCCCGGACCTTTCTGGCTGGCCACTCC
                      ____________________________________________________________
consensus             TGATCCTTGCTTTCGAAGAACTGGAGGAAAGTATCCCGGACCTTTCTGGCTGGCCACTCC
 
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JMFS071A12+           AATCCCGCC                                                   
JMFS070A10+           AATCCCGCC                                                   
JMSF011B24+           AATCCCGCCGCCGTCAGCTGAGAGCTCATCGTTGGAACTGGAGTCAACGCAGACGCAGAG
                      ____________________________________________________________
consensus             AATCCCGCCGCCGTCAGCTGAGAGCTCATCGTTGGAACTGGAGTCAACGCAGACGCAGAG
 
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JMSF011B24+           AAACGTCGCCGGAAAATACTACCTACTGCCGGAGCTTCCTCCTCCGCCACCGCCGCCGCC
                      ____________________________________________________________
consensus             AAACGTCGCCGGAAAATACTACCTACTGCCGGAGCTTCCTCCTCCGCCACCGCCGCCGCC
 
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JMSF011B24+           GCGGCGCAGTAAGAGGAAGAAGGAGGCGGTGGTTTGCGCCAATTTACCGGGAAAAACAGA
                      ____________________________________________________________
consensus             GCGGCGCAGTAAGAGGAAGAAGGAGGCGGTGGTTTGCGCCAATTTACCGGGAAAAACAGA
 
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JMSF011B24+           GCACAGCGGATGTAACTACTGCCTGCTCTCGTATAAATCCTCATTCATGATTCATCTCCA
                      ____________________________________________________________
consensus             GCACAGCGGATGTAACTACTGCCTGCTCTCGTATAAATCCTCATTCATGATTCATCTCCA