Contig 003585:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011A18Sequence262003585 (2)758001301 (2)ref|XP_009627975.1|8e-122PREDICTED: pentatricopeptide repeat-containing protein At4g14820, partial [Nico
JMSF017M20Sequence423003585 (2)ref|XP_002278762.1|7e-20PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifer794001301 (2)ref|XP_010256086.1|2e-123PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Nelumbo nucif

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF017M20+ CTTCAGCAAGGGCGGAAAACCAAACCGGTCAACGGAAAAGCCTTTCTTCCGA
                      ____________________________________________________________
consensus CTTCAGCAAGGGCGGAAAACCAAACCGGTCAACGGAAAAGCCTTTCTTCCGA
 
. : . : . : . : . : . :
JMSF017M20+ AGAGCCCCAAAAACCAAGAGGGCTTTTCTAGGTTCCCGGGAACGGGAAAGTTTGCGCAAG
                      ____________________________________________________________
consensus AGAGCCCCAAAAACCAAGAGGGCTTTTCTAGGTTCCCGGGAACGGGAAAGTTTGCGCAAG
 
. : . : . : . : . : . :
JMSF017M20+ AGCTTGTTGCAGAGGTGGGGTTCGGGATTGTGGATGTTGAAGAAGACGGCGAGGGCGTAG
                      ____________________________________________________________
consensus AGCTTGTTGCAGAGGTGGGGTTCGGGATTGTGGATGTTGAAGAAGACGGCGAGGGCGTAG
 
. : . : . : . : . : . :
JMSF017M20+ TCGGAGGAGAAGGGGAGTGAGGAGAGGACGAAGTCGAGTAGGAGGGAGTTGGAGCGGTGT
JMSF011A18+ TAGGAGGGAGTTGNAGCGGTNT
                      ____________________________________________________________
consensus TCGGAGGAGAAGGGGAGTGAGGAGAGGACGAAGTCGAGTAGGAGGGAGTTGGAGCGGTGT
 
. : . : . : . : . : . :
JMSF017M20+ AGGTTGTTGCGGAAGATTTGGGCGTGGATTTGCTTCAGGTGGGAGAGGGATGCCGCTGAG
JMSF011A18+ AGGTTGTTGCGGAAGATTTGGGCGTGGATTTGCTTCAGGTGGGAGAGGGATGCCGCTGAG
                      ____________________________________________________________
consensus AGGTTGTTGCGGAAGATTTGGGCGTGGATTTGCTTCAGGTGGGAGAGGGATGCCGCTGAG
 
. : . : . : . : . : . :
JMSF017M20+ GAGATGGCGGTAGAGAGGTGGCGGGGATGGGCGGCGCCGGGTGCAATGGTTGTAAGTGGA
JMSF011A18+ GAGATGGCGGTAGAGAGGTGGCGGGGATGGGCGGCGCCGGGTGCAATGGTTGTAAGTGGA
                      ____________________________________________________________
consensus GAGATGGCGGTAGAGAGGTGGCGGGGATGGGCGGCGCCGGGTGCAATGGTTGTAAGTGGA
 
. : . : . : . : . : . :
JMSF017M20+ GAGGAGACTGAAGCAGTGGCTATGGCGGCCATGGCATGGGGAGAGTTCAGAGATGGACTG
JMSF011A18+ GAGGAGACTGAAGCAGTGGCTATGGCGGCCATGGCATGGGGAGAGTTCAGAGATGGACTG
                      ____________________________________________________________
consensus GAGGAGACTGAAGCAGTGGCTATGGCGGCCATGGCATGGGGAGAGTTCAGAGATGGACTG
 
. : . : . : . : . : . :
JMSF017M20+ GAAATGGACC
JMSF011A18+ GAAATGGACCAAATTCCCAATTTCTTGTGTTTCTCAAAATCAGTTGAACAGTTAGTCAGC
                      ____________________________________________________________
consensus GAAATGGACCAAATTCCCAATTTCTTGTGTTTCTCAAAATCAGTTGAACAGTTAGTCAGC