Contig 003584:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006L23Sequence599003584 (5)ref|XP_009789015.1|1e-42PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X1 [Nico800002518 (5)ref|XP_009789016.1|7e-65PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico
JMFF012P07Sequence451003584 (5)762002518 (5)ref|XP_009789016.1|4e-60PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico
JMFF029N15Sequence534003584 (5)ref|XP_006343290.1|2e-17PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Sola759002518 (5)ref|XP_009789016.1|2e-59PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico
JMSF011A05Sequence255003584 (5)800002518 (5)ref|XP_009789016.1|4e-72PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico
JMSF034N08Sequence612003584 (5)ref|XP_006343289.1|2e-29PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X1 [Sola717002518 (5)ref|XP_009789016.1|4e-52PREDICTED: uncharacterized GPI-anchored protein At1g61900-like isoform X2 [Nico

Alignment

This contig is upended


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JMFF006L23+                                  TTGACGGGTTAAGAGAGCAGATTTGTTGTAGCGTATC
                      ____________________________________________________________
consensus                                    TTGACGGGTTAAGAGAGCAGATTTGTTGTAGCGTATC
 
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JMFF006L23+           ATTGGCACCCCTGCTCTCGAGAATTTTCTGAAAATCCGAGAGGCAATGCTCTGCAAGGGT
JMSF034N08+                                             TCCGAGAGGCAATGCTCTGCAAGGGT
                      ____________________________________________________________
consensus             ATTGGCACCCCTGCTCTCGAGAATTTTCTGAAAATCCGAGAGGCAATGCTCTGCAAGGGT
 
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JMFF006L23+           CGCGTTTAAAGCGAGTGTATTTGTATATTTACTATGTTGGCCCACAAGCACAACGAGAGT
JMFF029N15+                                                              AACGAGAGT
JMSF034N08+           CGCGTTTAAAGCGAGTGTATTTGTATATTTACTATGTTGGCCCACAAGCACAACGAGAGT
                      ____________________________________________________________
consensus             CGCGTTTAAAGCGAGTGTATTTGTATATTTACTATGTTGGCCCACAAGCACAACGAGAGT
 
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JMFF006L23+           GGTTTCCAGTTGCGGGCAACACATGACGTTTGCTAGATACTTTGCAAACGGAGCAGCACA
JMFF029N15+           GGTTTCCAGTTGCGGGCAACACATGACGTTTGCTAGATACTTTGCAAACGGAGCAGCACA
JMSF034N08+           GGTTTCCAGTTGCGGGCAACACATGACGTTTGCTAGATACTTTGCAAACGGAGCAGCACA
                      ____________________________________________________________
consensus             GGTTTCCAGTTGCGGGCAACACATGACGTTTGCTAGATACTTTGCAAACGGAGCAGCACA
 
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JMFF006L23+           ATCAATCGAGGTCATGCTTATCATGCTTCCCAGAGCAGCAAAGTTTAACGGGCAGGACCC
JMFF012P07+                          GCTTATCATGCTTCCCAGAGCAGCAAAGTTTAACGGGCAGGACCC
JMFF029N15+           ATCAATCGAGGTCATGCTTATCATGCTTCCCAGAGCAGCAAAGTTTAACGGGCAGGACCC
JMSF034N08+           ATCAATCGAGGTCATGCTTATCATGCTTCCCAGAGCAGCAAAGTTTAACGGGCAGGACCC
                      ____________________________________________________________
consensus             ATCAATCGAGGTCATGCTTATCATGCTTCCCAGAGCAGCAAAGTTTAACGGGCAGGACCC
 
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JMFF006L23+           AGACAACTTCGGGACACTGC-TATTTGTGAACGGTGCCAAAGGAGAAGGCGCCAGAAGAG
JMFF012P07+           AGACAACTTCGGGACACTGCTTATTTGTGAACGGTGCCAAAGGAGAAGGCGCCAGAAGAG
JMFF029N15+           AGACAACTTCGGGACACTGC-TATTTGTGAACGGTGCCAAAGGAGAAGGCGCCAGAAGAG
JMSF034N08+           AGACAACTTCGGGACACTGC-TATTTGTGAACGGTGCCAAAGGAGAAGGCGCCAGAAGAG
                      ____________________________________________________________
consensus             AGACAACTTCGGGACACTGC-TATTTGTGAACGGTGCCAAAGGAGAAGGCGCCAGAAGAG
 
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JMFF006L23+           GAAGAAGCGGCTGAGCCTCAGGCGCTGCAGTTGGGGCGGCAGTCTGGGGTAAAAGACCAT
JMFF012P07+           GAAGAAGCGGCTGAGCCTCAGGCGCTGCAGTTGGGGCGGCAGTCTGGGGTAAAAGACCAT
JMFF029N15+           GAAGAAGCGGCTGAGCCTCAGGCGCTGCAGTTGGGGCGGCAGTCTGGGGTAAAAGACCAT
JMSF034N08+           GAAGAAGCGGCTGAGCCTCAGGCGCTGCAGTTGGGGCGGCAGTCTGGGGTAAAAGACCAT
                      ____________________________________________________________
consensus             GAAGAAGCGGCTGAGCCTCAGGCGCTGCAGTTGGGGCGGCAGTCTGGGGTAAAAGACCAT
 
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JMFF006L23+           TCCCCGTTTTTTCTGGAAGTTCCGAACTCTTGAGATTGTTCAATGGACTGCAACAGGCAT
JMFF012P07+           TCCCCGTTTTTTCTGGAAGTTCCGAACTCTTGAGATTGTTCAATGGACTGCAACAGGCAT
JMFF029N15+           TCCCCGTTTTTTCTGGAAGTTCCGAACTCTTGAGATTGTTCAATGGACTGCAACAGGCAT
JMSF034N08+           TCCCCGTTTTTTCTGGAAGTTCCGAACTCTTGAGATTGTTCAATGGACTGCAACAGGCAT
JMSF011A05+                                                        GACTGCANCAGGCAT
                      ____________________________________________________________
consensus             TCCCCGTTTTTTCTGGAAGTTCCGAACTCTTGAGATTGTTCAATGGACTGCAACAGGCAT
 
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JMFF006L23+           CATGAAGGCAGAGAAGCAGCAGAAGCAGAAATACATTAAGCTTCCAAGTCCAGGCCACCC
JMFF012P07+           CATGAAGGCAGAGAAGCAGCAGAAGCAGAAATACATTAAGCTTCCAAGTCCAGGCCACCC
JMFF029N15+           CATGAAGGCAGAGAAGCAGCAGAAGCAGAAATACATTAAGCTTCCAAGTCCAGGCCACCC
JMSF034N08+           CATGAAGGCAGAGAAGCAGCAGAAGCAGAAATACATTAAGCTTCCAAGTCCAGGCCACCC
JMSF011A05+           CATGAAGGCAGAGAAGCAGCAGAAGCAGAAATACATTAAGCTTCCAAGTCCAGGCCACCC
                      ____________________________________________________________
consensus             CATGAAGGCAGAGAAGCAGCAGAAGCAGAAATACATTAAGCTTCCAAGTCCAGGCCACCC
 
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JMFF006L23+           CCTTTCTCATACCTACTCTCCTCACCCCAGAACTCCCAACACAAACCAACCAGGTGGGAA
JMFF012P07+           CCTTTCTCATACCTACTCTCCTCACCCCAGAACTCCCAACACAAACCAACCAGGTGGGAA
JMFF029N15+           CCTTTCTCATACCTACTCTCCTCACCCCAGAACTCCCAACACAAACCAACCAGGTGGGAA
JMSF034N08+           CCTTTCTCATACCTACTCTCCTCACCCCAGAACTCCCAACACAAACCAACCAGGTGGGAA
JMSF011A05+           CCTTTCTCATACCTACTCTCCTCACCCCAGAACTCCCAACACAAACCAACCAGGTGGGAA
                      ____________________________________________________________
consensus             CCTTTCTCATACCTACTCTCCTCACCCCAGAACTCCCAACACAAACCAACCAGGTGGGAA
 
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JMFF006L23+           ACACAAGAAAACACAGAAAAGAT                                     
JMFF012P07+           ACACAAGAAAACACAGAAAAGATAAGAAATTTATGAGCAAGAACTGGGCTTTTTGGGGAG
JMFF029N15+           ACACAAGAAAACACAGAAAAGATAAGAAATTTATGAGCAAGAACTGGGCTTTTTGGGGAG
JMSF034N08+           ACACAAGAAAACACAGAAAAGATAAGAAATTTATGAGCAAGAACTGGGCTTTTTGGGGAG
JMSF011A05+           ACACAAGAAAACACAGAAAAGATAAGAAATTTATGAGCAAGAACTGGGCTTTTTGGGGAG
                      ____________________________________________________________
consensus             ACACAAGAAAACACAGAAAAGATAAGAAATTTATGAGCAAGAACTGGGCTTTTTGGGGAG
 
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JMFF012P07+           AAGGAGAAGGGGTATGTGGGAATAGAAGAAATCAGAAGCCATGAAT              
JMFF029N15+           AAGGAGAAGGGGTATGTGGGAATAGAAGAAATCAGAAGCCATGAAT              
JMSF034N08+           AAGGAGAAGGGGTATGTGGGAATAGAAGAAATCAGAAGCCATGAAT              
JMSF011A05+           AAGGAGAAGGGGTATGTGGGAATAGAAGAAATCAGAAGCCATGAATGAGGTGTTGCGCCC
                      ____________________________________________________________
consensus             AAGGAGAAGGGGTATGTGGGAATAGAAGAAATCAGAAGCCATGAATGAGGTGTTGCGCCC