Contig 003580:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030H02Sequence437003580 (2)ref|XP_009606818.1|6e-51PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Nicotiana to
JMSF010L14Sequence443003580 (2)ref|XP_009606818.1|6e-51PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Nicotiana to703024487emb|CDO97212.1|6e-89unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF030H02+                                                  CCGGAGCACGAGGTTCTGGAG
JMSF010L14+                                                TCCCGGAGCACGAGGTTCTGGAG
                      ____________________________________________________________
consensus                                                  TCCCGGAGCACGAGGTTCTGGAG
 
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JMFF030H02+           ATTGGGGAGCGAGGATAAAGAAGTGGGAATGGGGCCATAGAAGTTGTTGCTCTGAATGTC
JMSF010L14+           ATTGGGGAGCGAGGATAAAGAAGTGGGAATGGGGCCATAGAAGTTGTTGCTCTGAATGTC
                      ____________________________________________________________
consensus             ATTGGGGAGCGAGGATAAAGAAGTGGGAATGGGGCCATAGAAGTTGTTGCTCTGAATGTC
 
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JMFF030H02+           AAGAGTGATGAGCTGAGTGAGCTTGGAGATGAGCGGAGAAAGCGTGCCGGAGTAACCGGC
JMSF010L14+           AAGAGTGATGAGCTGAGTGAGCTTGGAGATGAGCGGAGAAAGCGTGCCGGAGTAACCGGC
                      ____________________________________________________________
consensus             AAGAGTGATGAGCTGAGTGAGCTTGGAGATGAGCGGAGAAAGCGTGCCGGAGTAACCGGC
 
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JMFF030H02+           CTTGTCGAGGATGAGCTGGGTGACTCGGTCGCCGGAGCAGGTGAGTCCACACAGAAAGTG
JMSF010L14+           CTTGTCGAGGATGAGCTGGGTGACTCGGTCGCCGGAGCAGGTGAGTCCACACAGAAAGTG
                      ____________________________________________________________
consensus             CTTGTCGAGGATGAGCTGGGTGACTCGGTCGCCGGAGCAGGTGAGTCCACACAGAAAGTG
 
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JMFF030H02+           AGTGAGTCGAGGGAGAGAACACGGATCAGCAGAGGCGAAATCCCAGGAGCCCAAGCAAGA
JMSF010L14+           AGTGAGTCGAGGGAGAGAACACGGATCAGCAGAGGCGAAATCCCAGGAGCCCAAGCAAGA
                      ____________________________________________________________
consensus             AGTGAGTCGAGGGAGAGAACACGGATCAGCAGAGGCGAAATCCCAGGAGCCCAAGCAAGA
 
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JMFF030H02+           ATAAGAAGGAACAGTGGATGGCTTTATGGCGGACTTGAAAGCCTTGAGAGCTTCAACATC
JMSF010L14+           ATAAGAAGGAACAGTGGATGGCTTTATGGCGGACTTGAAAGCCTTGAGAGCTTCAACATC
                      ____________________________________________________________
consensus             ATAAGAAGGAACAGTGGATGGCTTTATGGCGGACTTGAAAGCCTTGAGAGCTTCAACATC
 
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JMFF030H02+           TGAGAACTCCGTGAGGGATTCTGCAGAGAGAAACACAGAGAAAAATATGACAAAGAAGAG
JMSF010L14+           TGAGAACTCCGTGAGGGATTCTGCAGAGAGAAACACAGAGAAAAATATGACAAAGAAGAG
                      ____________________________________________________________
consensus             TGAGAACTCCGTGAGGGATTCTGCAGAGAGAAACACAGAGAAAAATATGACAAAGAAGAG
 
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JMFF030H02+           GAAGAAGAAGGAGGAGAAGGCGGAGCTTGACATGTTTGAAAAGCAACGGCGAAGAC    
JMSF010L14+           GAAGAAGAAGGAGGAGAAGGCGGAGCTTGACATGTTTGAAAAGCAACGGCGAAGACTTTC
                      ____________________________________________________________
consensus             GAAGAAGAAGGAGGAGAAGGCGGAGCTTGACATGTTTGAAAAGCAACGGCGAAGACTTTC