Contig 003573:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023C03+                                                  GCGGTGCGCTGCCAAAAAGAT
                      ____________________________________________________________
consensus                                                    GCGGTGCGCTGCCAAAAAGAT
 
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JMSF023C03+           CCTCTGGTGTTGAAGTACACAATAAAATTAGATCTACATCACCAGGATCAACCTCGGCCA
JMSF023D06+                             ACAATAAAATTAGATCTACATCACCAGGATCAACCTCGGCCA
                      ____________________________________________________________
consensus             CCTCTGGTGTTGAAGTACACAATAAAATTAGATCTACATCACCAGGATCAACCTCGGCCA
 
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JMSF023C03+           TCTCGAGAGCTTTCTTTGAAGCCTCCACAGCTAGAGCAGTCATATTGTCTTTGCCTGAAA
JMSF023D06+           TCTCGAGAGCTTTCTTTGAAGCCTCCACAGCTAGAGCAGTCATATTGTCTTTGCCTGAAA
                      ____________________________________________________________
consensus             TCTCGAGAGCTTTCTTTGAAGCCTCCACAGCTAGAGCAGTCATATTGTCTTTGCCTGAAA
 
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JMSF023C03+           GAACTCTTCGATTGCGGATTCCAGTTCGGACAGAAATCCATTCATCGTTAGTATCGACAA
JMSF023D06+           GAACTCTTCGATTGCGGATTCCAGTTCGGACAGAAATCCATTCATCGTTAGTATCGACAA
                      ____________________________________________________________
consensus             GAACTCTTCGATTGCGGATTCCAGTTCGGACAGAAATCCATTCATCGTTAGTATCGACAA
 
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JMSF023C03+           GTTTCGCAAGGTCTTCATTGGAAATACTTAAACTCGGCAGTGCAGAGCCACACCCTACTA
JMSF023D06+           GTTTCGCAAGGTCTTCATTGGAAATACTTAAACTCGGCAGTGCAGAGCCACACCCTACTA
                      ____________________________________________________________
consensus             GTTTCGCAAGGTCTTCATTGGAAATACTTAAACTCGGCAGTGCAGAGCCACACCCTACTA
 
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JMSF023C03+           GTTTGCAGCCTTTGAAACCAACACTGGAGTCCGCATTTATAAGCGGAGTAGGGCGAGAGG
JMSF023D06+           GTTTGCAGCCTTTGAAACCAACACTGGAGTCCGCATTTATAAGCGGAGTAGGGCGAGAGG
                      ____________________________________________________________
consensus             GTTTGCAGCCTTTGAAACCAACACTGGAGTCCGCATTTATAAGCGGAGTAGGGCGAGAGG
 
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JMSF023C03+           CGGATGGATCCGCGGCGGATGCGTTGAAAACGAGCTTCCGCGCTCCAACTCGGCGCAAGG
JMSF023D06+           CGGATGGATCCGCGGCGGATGCGTTGAAAACGAGCTTCCGCGCTCCAACTCGGCGCAAGG
                      ____________________________________________________________
consensus             CGGATGGATCCGCGGCGGATGCGTTGAAAACGAGCTTCCGCGCTCCAACTCGGCGCAAGG
 
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JMSF023C03+           ACACCATGCGTGAGCTGGAAGTAGGGGAGATAGAGGCGCCGGAAAACTTGACCGGCGTGA
JMSF023D06+           ACACCATGCGTGAGCTGGAAGTAGGGGAGATAGAGGCGCCGGAAAACTTGACCGGCGTGA
                      ____________________________________________________________
consensus             ACACCATGCGTGAGCTGGAAGTAGGGGAGATAGAGGCGCCGGAAAACTTGACCGGCGTGA
 
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JMSF023C03+           GTTGAGAAGAGAAGGGATTGACGCATTGACAGCCCATGATTGGAGGAGAAATCTAGAGTT
JMSF023D06+           GTTGAGAAGAGAAGGGATTGACGCATTGACAGCCCATGATTGGAGGAGAAATCTAGAGTT
JMSF009P18+                                                      AGGAGAAATCTAGAGTT
                      ____________________________________________________________
consensus             GTTGAGAAGAGAAGGGATTGACGCATTGACAGCCCATGATTGGAGGAGAAATCTAGAGTT
 
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JMSF023C03+           GTGGGAGTAAGGAAGAAAGGATAAATGTTGGGAAGAGTGACCGGCGGCAAGAAGTGGGTG
JMSF023D06+           GTGGGAGTAAGGAAGAAAGGATAAATGTTGGGAAGAGTGACCGGCGGCAAGAAGTGGGTG
JMSF009P18+           GTGGGAGTAAGGAAGAAAGGATAAATGTTGGGAAGAGTGACCGGCGGCAAGAAGTGGGTG
                      ____________________________________________________________
consensus             GTGGGAGTAAGGAAGAAAGGATAAATGTTGGGAAGAGTGACCGGCGGCAAGAAGTGGGTG
 
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JMSF023C03+           GTCGCCGGCGGGGCGTATAATGAGAGAGAAATGAAGAATGGTGGCTGGGGTTTTGTTGTG
JMSF023D06+           GTCGCCGGCGGGGCGTATAATGAGAGAGAAATGAAGAATGGTGGCTGGGGTTTTGTTGTG
JMSF009P18+           GTCGCCGGCGGGGCGTATAATGAGAGAGAAATGAAGAATGGTGGCTGGGGTTTTGTTGTG
                      ____________________________________________________________
consensus             GTCGCCGGCGGGGCGTATAATGAGAGAGAAATGAAGAATGGTGGCTGGGGTTTTGTTGTG
 
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JMSF023C03+           TTGGGTTGCGGAGTGAGCGAGAGATGGACGGAGGGAGC                      
JMSF023D06+           TTGGGTTGCGGAGTGAGCGAGAGATGGACGGAGGGAGCAAGTAAAAATCAC         
JMSF009P18+           TTGGGTTGCGGAGTGAGCGAGAGATGGACGGAGGGAGCAAGTAAAAATCACATATTTTGC
                      ____________________________________________________________
consensus             TTGGGTTGCGGAGTGAGCGAGAGATGGACGGAGGGAGCAAGTAAAAATCACATATTTTGC
 
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JMSF009P18+           ATCATATTATGGGTTCATCGTCTACAGAGGAGAGATGGACGGGGAAAGCGAGGCTAGTTC
                      ____________________________________________________________
consensus             ATCATATTATGGGTTCATCGTCTACAGAGGAGAGATGGACGGGGAAAGCGAGGCTAGTTC