| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025A21 | Sequence | 665 | 003569 (5) | gb|KJB42837.1| | 8e-76 | hypothetical protein B456_007G169700 [Gossypium raimondii] | 698 | 011070 (5) | ref|XP_010913398.1| | 313 | PREDICTED: protein disulfide isomerase-like 2-3 [Elaeis guineensis] |
| JMSF004N19 | Sequence | 346 | 003569 (5) | ref|XP_011003479.1| | 134 | PREDICTED: protein disulfide isomerase-like 2-3 [Populus euphratica] | |||||
| JMSF007O14 | Sequence | 214 | 003569 (5) | 780 | 011070 (5) | ref|XP_010913398.1| | 372 | PREDICTED: protein disulfide isomerase-like 2-3 [Elaeis guineensis] | |||
| JMSF009H05 | Sequence | 369 | 003569 (5) | ref|XP_011003479.1| | 137 | PREDICTED: protein disulfide isomerase-like 2-3 [Populus euphratica] | 778 | 011070 (5) | ref|XP_010913398.1| | 370 | PREDICTED: protein disulfide isomerase-like 2-3 [Elaeis guineensis] |
| JMSF046B04 | Sequence | 661 | 003569 (5) | gb|KJB42837.1| | 2e-89 | hypothetical protein B456_007G169700 [Gossypium raimondii] | 590 | 011070 (5) | ref|XP_004491086.1| | 2e-67 | PREDICTED: protein disulfide isomerase-like 2-3-like [Cicer arietinum] |
This contig is upended
. : . : . : . : . : . :
JMSF046B04+ CTTGCAGTGGCC
JMFF025A21+ CTTGCAGTGGCC
____________________________________________________________
consensus CTTGCAGTGGCC
. : . : . : . : . : . :
JMSF046B04+ ACACCAAGGTGCAAAGAACTCCACAAT-CCAGAGGTCTTTGCTTTTAACCACCAAGTCAT
JMFF025A21+ ACCCCAAGGTGCAAAGAACTCCACAATCCCAGAGGTCTTTGCTTTTAACCACCAAGTCAT
____________________________________________________________
consensus ACCCCAAGGTGCAAAGAACTCCACAATCCCAGAGGTCTTTGCTTTTAACCACCAAGTCAT
. : . : . : . : . : . :
JMSF046B04+ CAAAATTTCTTGAGTTCAATTCAACTGAAGCACTAGGTTCAGACTTTTGAGAAGACCCTC
JMFF025A21+ CAAAATTTCTTGAGTTCAATTCAACTGAAGCACTAGGTTCAGACTTTTGAGAAGACCCTC
____________________________________________________________
consensus CAAAATTTCTTGAGTTCAATTCAACTGAAGCACTAGGTTCAGACTTTTGAGAAGACCCTC
. : . : . : . : . : . :
JMSF046B04+ CGGTTGCTTTTCCATCTAACCGATCCTTCAACAGATTCCTAATCTGTGCCTTTACGAAGT
JMFF025A21+ CGGTTGCTTTTCCATCTAACCGATCCTTCAACAGATTCCTAATCTGTGCCTTTACGAAGT
____________________________________________________________
consensus CGGTTGCTTTTCCATCTAACCGATCCTTCAACAGATTCCTAATCTGTGCCTTTACGAAGT
. : . : . : . : . : . :
JMSF046B04+ CAACCATGGATTTAGCCTCCCTTGCGCCTTGATAATCCACAGGCTGCTTTCCAGGTACAA
JMFF025A21+ CAACCATGGATTTAGCCTCCCTTGCGCCTTGATAATCCACAGGCTGCTTTCCAGGTACAA
____________________________________________________________
consensus CAACCATGGATTTAGCCTCCCTTGCGCCTTGATAATCCACAGGCTGCTTTCCAGGTACAA
. : . : . : . : . : . :
JMSF004N19+ GAAAGCCTTTAATGCCATATTCCTGAGCAAGGGAGCTGTGAGCAT
JMSF046B04+ AAACCTTAATGGTAGGAAAGCCTTTAATGCCATATTCCTGAGCAAGGGAGCTGTGAGCAT
JMFF025A21+ AAACCTTAATGGTAGGAAAGCCTTTAATGCCATATTCCTGAGCAAGGGAGCTGTGAGCAT
JMSF009H05+ TGTGAGCAT
____________________________________________________________
consensus AAACCTTAATGGTAGGAAAGCCTTTAATGCCATATTCCTGAGCAAGGGAGCTGTGAGCAT
. : . : . : . : . : . :
JMSF004N19+ CGGCATCTAGTGCTGCGACGGTAGCGACGCCTTTCAAGACAGAAGCGACCTTCTCATACG
JMSF046B04+ CGGCATCTAGTGCTGCGACGGTAGCGACGCCTTTCAAGACAGAAGCGACCTTCTCATACG
JMFF025A21+ CGGCATCTAGTGCTGCGACGGTAGCGACGCCTTTCAAGACAGAAGCGACATTCTCATACG
JMSF009H05+ CGGCATCTAGTGCTGCGACGGTAGCGACGCCTTTCAAGACAGAAGCGACCTTCTCATACG
____________________________________________________________
consensus CGGCATCTAGTGCTGCGACGGTAGCGACGCCTTTCAAGACAGAAGCGACCTTCTCATACG
. : . : . : . : . : . :
JMSF004N19+ TGGGTGTTAACGCCTTACAGTGGCCACACCACGGGGCAAAGAACTCTACCAACACTACGC
JMSF046B04+ TGGGTGTTAACGCCTTACAGTGGCCACACCACGGGGCAAAGAACTCTACCAACACTACGC
JMFF025A21+ TGGGTGTTAACGCCTTACAGTGGCCACACCACGGGGCAAAGAACTCTACCAACACTACGC
JMSF009H05+ TGGGTGTTAACGCCTTACAGTGGCCACACCACGGGGCAAAGAACTCTACCAACACTACGC
____________________________________________________________
consensus TGGGTGTTAACGCCTTACAGTGGCCACACCACGGGGCAAAGAACTCTACCAACACTACGC
. : . : . : . : . : . :
JMSF004N19+ CATTGGAATTCAGAACCTTAGACTTAAAATTAGAAGGATTTAACTGAAGAACGGGAGTGG
JMSF046B04+ CATTGGAATTCAGAACCTTAGACTTAAAATTAGAAGGATTTAACTGAAGAACGGGAGTGG
JMSF007O14+ TAGACTTAAAATTAGAAGGATTTAACTGAAGAACGGGAGTGG
JMFF025A21+ CATTGGAATTCAGAACCTTAGACTTAAAATTAGAAGGATTTAACTGAAGAACGGGAGTGG
JMSF009H05+ CATTGGAATTCAGAACCTTAGACTTAAAATTAGAAGGATTTAACTGAAGAACGGGAGTGG
____________________________________________________________
consensus CATTGGAATTCAGAACCTTAGACTTAAAATTAGAAGGATTTAACTGAAGAACGGGAGTGG
. : . : . : . : . : . :
JMSF004N19+ AGGGGCCATATAGAGCATTAACAGTTGTGATCAGTGTAACTAACAACAGTGGCAATGGTA
JMSF046B04+ AGGGGCCATATAGAGCATTAACAGTTGTGATCAGTGTAACTAACAACAGTGGCAATGGTA
JMSF007O14+ AGGGGCCATATAGAGCATTAACAGTTGTGATCAGTGTAACTAACAACAGTGGCAATGGTA
JMFF025A21+ AGGGGCCATATAGAGCATTAACAGTTGTGATCAGTGTAACTAACAACAGTGGCAATGGTA
JMSF009H05+ AGGGGCCATATAGAGCATTAACAGTTGTGATCAGTGTAACTAACAACAGTGGCAATGGTA
____________________________________________________________
consensus AGGGGCCATATAGAGCATTAACAGTTGTGATCAGTGTAACTAACAACAGTGGCAATGGTA
. : . : . : . : . : . :
JMSF004N19+ GAAACCTCGCCGATCGTTCCATTCGATCTCTTCCTAATTCCTTCGCTGTTTGTTTCGTTT
JMSF046B04+ GAAACCTCGCCGATCGTTCCATTCGATCTCTTCCTAATTCCTTCGCTGTTTGTTTCGTTT
JMSF007O14+ GAAACCTCGCCGATCGTTCCATTCGATCTCTTCCTAATTCCTTCGCTGTTTGTTTCGTTT
JMFF025A21+ GAAACCTCGCCGATCGTTCCATTCGATCTCTTCCTAATTCCTTCGCTGTTTGTTTCGTTT
JMSF009H05+ GAAACCTCGCCGATCGTTCCATTCGATCTCTTCCTAATTCCTTCGCTGTTTGTTTCGTTT
____________________________________________________________
consensus GAAACCTCGCCGATCGTTCCATTCGATCTCTTCCTAATTCCTTCGCTGTTTGTTTCGTTT
. : . : . : . : . : . :
JMSF046B04+ GGGAGAGTGATGGCGGATGACTGCAGAATAGTAGAATACCCAGCTGCACC
JMSF007O14+ GGGAGAGTGATGGCGGATGACTGCAGAATAGTAGAATACCCAGCTGCACC
JMFF025A21+ GGGAGAGTGATGGCGGATGACTGCAGAATAGTAGAATACCCAGCTGCACC
JMSF009H05+ GGGAGAGTGATGGCGGATGACTGCAGAATAGTAGAATACCCAGCTGCACCGGGAGTCCCC
____________________________________________________________
consensus GGGAGAGTGATGGCGGATGACTGCAGAATAGTAGAATACCCAGCTGCACCGGGAGTCCCC