| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF008K10 | Sequence | 431 | 003564 (11) | ref|XP_010505114.1| | 5e-28 | PREDICTED: serine carboxypeptidase-like 9 isoform X3 [Camelina sativa] | 740 | 002993 (3) | ref|XP_006363405.1| | 3e-40 | PREDICTED: probable calcium-binding protein CML45-like [Solanum tuberosum] |
| JMSF011O05 | Sequence | 249 | 003564 (11) | ref|NP_973517.1| | 6e-08 | serine carboxypeptidase-like 9 [Arabidopsis thaliana] gb|AEC07396.1| serine carb | 769 | 002993 (3) | ref|XP_009376279.1| | 1e-28 | PREDICTED: probable calcium-binding protein CML45 [Pyrus x bretschneideri] |
| JMSF016G07 | Sequence | 236 | 003564 (11) | ref|NP_973517.1| | 9e-07 | serine carboxypeptidase-like 9 [Arabidopsis thaliana] gb|AEC07396.1| serine carb | 793 | 022505 | ref|XP_004252000.2| | 8e-44 | PREDICTED: serine carboxypeptidase-like 7 [Solanum lycopersicum] ref|XP_01031400 |
| JMSF016K12 | Sequence | 527 | 003564 (11) | ref|XP_009761854.1| | 2e-47 | PREDICTED: serine carboxypeptidase-like 18 [Nicotiana sylvestris] | 749 | 012572 (3) | gb|KHG16860.1| | 6e-47 | Serine carboxypeptidase-like 19 [Gossypium arboreum] |
| JMSF018J04 | Sequence | 234 | 003564 (11) | ref|XP_003604927.1| | 5e-05 | Serine carboxypeptidase [Medicago truncatula] | 789 | 001340 (3) | ref|XP_010320344.1| | 5e-47 | PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum] |
| JMSF026K04 | Sequence | 672 | 003564 (11) | emb|CDP17658.1| | 7e-66 | unnamed protein product [Coffea canephora] | 764 | 001340 (3) | ref|XP_010320344.1| | 3e-47 | PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum] |
| JMSF029G08 | Sequence | 671 | 003564 (11) | emb|CDP17658.1| | 2e-65 | unnamed protein product [Coffea canephora] | 764 | 012572 (3) | ref|XP_009768014.1| | 2e-56 | PREDICTED: serine carboxypeptidase-like 17 [Nicotiana sylvestris] |
| JMSF037P14 | Sequence | 671 | 003564 (11) | emb|CDP17658.1| | 8e-66 | unnamed protein product [Coffea canephora] | 739 | 001340 (3) | ref|XP_010320344.1| | 2e-48 | PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum] |
| JMSF040C24 | Sequence | 666 | 003564 (11) | ref|XP_009771130.1| | 2e-66 | PREDICTED: serine carboxypeptidase-like 13 isoform X3 [Nicotiana sylvestris] | 812 | 015121 | ref|XP_004252000.2| | 8e-23 | PREDICTED: serine carboxypeptidase-like 7 [Solanum lycopersicum] ref|XP_01031400 |
| JMSF048M03 | Sequence | 671 | 003564 (11) | emb|CDP17658.1| | 2e-65 | unnamed protein product [Coffea canephora] | 755 | 012572 (3) | ref|XP_009771129.1| | 7e-54 | PREDICTED: serine carboxypeptidase-like 13 isoform X2 [Nicotiana sylvestris] |
| JMSF048P04 | Sequence | 695 | 003564 (11) | emb|CDP17658.1| | 6e-69 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF026K04+ CATCAATCCCATATGATAT
JMSF037P14+ CATCAATCCCATATGATAT
JMSF048P04+ TAAGATTAACGTGTGGCTTAAATCTGGCATCAATCCCATATGATAT
JMSF040C24+ CATATGATAT
JMSF048M03+ ATCAATCCCATATGATAT
JMSF029G08+ CATCAATCCCATATGATAT
____________________________________________________________
consensus TAAGATTAACGTGTGGCTTAAATCTGGCATCAATCCCATATGATAT
. : . : . : . : . : . :
JMSF026K04+ TGCTTGAGCAACCATTGGAACGGTAATACCAGAATATGAGTCTCCACCAACATAGAATGA
JMSF037P14+ TGCTTGAGCAACCATNGGAACGGTAATACCAGAATATGAGTCTCCACCAACATAGAATGA
JMSF048P04+ TGCTTGAGCAACCATTGGAACGGTAATACCAGAATATGAGTCTCCACCAACATAGAATGA
JMSF040C24+ TGCNTGANCAACCATNGGAACGGTAATACCAGAATATGAGTCTCCACCAACATAGAATGA
JMSF048M03+ TGCTTGAGCAACCATTGGAACGGTAATACCAGAATATGAGTCTCCACCAACATAGAATGA
JMSF029G08+ TGCTTGAGCAACCATTGGAACGGTAATACCAGAATATGAGTCTCCACCAACATAGAATGA
____________________________________________________________
consensus TGCTTGAGCAACCATTGGAACGGTAATACCAGAATATGAGTCTCCACCAACATAGAATGA
. : . : . : . : . : . :
JMSF026K04+ GTTGGATTGATATTGAAAATGATCTTCTAACCACTTGCGAATAAATTCAGCTCCATGATA
JMSF037P14+ GTTGGATTGATATTGAAAATGATCTTCTAACCACTTGCGAATAAATTCAGCTCCATGATA
JMSF048P04+ GTTGGATTGATATTGAAAATGATCTTCTAACCACTTGCGAATAAATTCAGCTCCATGATA
JMSF040C24+ GTTTGATTGATATTGAAAATGATCTTCTAACCACTTGCGAATGAATTCAGCTGCATGATA
JMSF048M03+ GTTGGATTGAAATTGAAAGTGATCTTCAAACCACTTGCGAATAAATTCAGCTCCATGATA
JMSF029G08+ GTTGGATTGAAATTGAAAGTGATCTTCAAACCACTTGCGAATAAATTCAGCTCCATGATA
____________________________________________________________
consensus GTTGGATTGATATTGAAAATGATCTTCTAACCACTTGCGAATAAATTCAGCTCCATGATA
. : . : . : . : . : . :
JMSF026K04+ ACTTGTTTCTACAT------CAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGT
JMSF037P14+ ACTTGTTTCTACAT------CAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGT
JMSF048P04+ ACTTGTTTCTACAT------CAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGT
JMSF016K12+ TACATCAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGT
JMSF040C24+ ACTTGCTTCTACATCATTCGCAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGC
JMSF048M03+ ACTTATTTCTACAT------CAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGT
JMSF029G08+ ACTTATTTCTACAT------CAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGT
____________________________________________________________
consensus ACTTGTTTCTACAT------CAGTATAATTTTTTGAACTTTTAGCATACGAAAATCCTGT
. : . : . : . : . : . :
JMSF026K04+ TCCCACGGGTAAGTCTATAAAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
JMSF037P14+ TCCCACGGGTAAGTCTATAAAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
JMSF048P04+ TCCCACGGGTAAGTCTATAAAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
JMSF016K12+ TCCCACAGGTAACTCTAAAAAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
JMSF040C24+ TCCCACGGGATAATCTAGATAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
JMSF048M03+ TCCCACAGGTAACTCTAAAAAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
JMSF029G08+ TCCCACAGGTAACTCTAAAAAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
____________________________________________________________
consensus TCCCACGGGTAAGTCTATAAAGATAAAGCTTGCAACCTTTGTCCATGAATAAGGATTTAG
. : . : . : . : . : . :
JMSF026K04+ TGACAATGTAGGCAAAGTCCGGTTATTCTTTGGTACATCAAATAACAATGGCCCCAATTC
JMSF037P14+ TGACAATGTAGGCAAAGTCCGGTTATTCTTTGGTACATCAAATAACAATGGCCCCAATTC
JMSF048P04+ TGACAATGTAGGCAAAGTCCGGTTATTCTTTGGTACATCAAATAACAATGGCCCCAATTC
JMSF016K12+ TGACAATGTAGGCAAATTTCGGTTATTCTTTGATACATCAAATAACAATGGCCCCAATTC
JMSF040C24+ TGACAATGTAGGCAAAGTCCAGTTATTCTTTGGTAGATCAAATAACAATGGCCCAATTTC
JMSF048M03+ TGACAATGTAGGCAAATTTCGGTTATTCTTTGATACATCAAATAACAATGGCCCCAATTC
JMSF029G08+ TGACAATGTAGGCAAATTTCGGTTATTCTTTGATACATCAAATAACAATGGCCCCAATTC
JMSF008K10+ CAATTTC
____________________________________________________________
consensus TGACAATGTAGGCAAAGTCCGGTTATTCTTTGGTACATCAAATAACAATGGCCCCAATTC
. : . : . : . : . : . :
JMSF026K04+ TTCTGTCATTGCAACAAAAGAAGAGCATCCGGGACCACCACTGATCCAAAGCACAATTGG
JMSF037P14+ TTCTGTCATTGCAACAAAAGAAGAGCATCCGGGACCACCACTGATCCAAAGCACAATTGG
JMSF048P04+ TTCTGTCATTGCAACAAAAGAAGAGCATCCGGGACCACCACTGATCCAAAGCACAATTGG
JMSF016K12+ TTCCGTCATTCCAACAAAAGAAGAGCATCCGGGACCACCGGAGATCCAAAGTACAATTGG
JMSF040C24+ TTCCGTCATTGCAACAAAAGAAGAGCACCCGGGACCACCGGTGATCCAAAGCACAATAGG
JMSF048M03+ TTCCGTCATTCCAACAAAAGAAGAGCATCCGGGACCACCGGAGATCCAAAGTACAATTGG
JMSF029G08+ TTCCGTCATTCCAACAAAAGAAGAGCATCCGGGACCACCGGAGATCCAAAGTACAATTGG
JMSF008K10+ TTCCGTCATTGCAACAAAAGAAGAGCATCCGGGACCACCGGTGATCCAAAGCACAATAGG
____________________________________________________________
consensus TTCCGTCATTGCAACAAAAGAAGAGCATCCGGGACCACCGGTGATCCAAAGCACAATTGG
. : . : . : . : . : . :
JMSF026K04+ ATCAATATTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTATATCTTCTGA
JMSF037P14+ ATCAATATTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTATATCTTCTGA
JMSF048P04+ ATCAATATTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTATATCTTCTGA
JMSF016K12+ ATCAATATTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTACATCTTTTGA
JMSF040C24+ ATCAATACTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTATATCTTCTAA
JMSF048M03+ ATCAATATTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTACATCTTTTGA
JMSF029G08+ ATCAATATTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTACATCTTTTGA
JMSF011O05+ ATATCTTCTAA
JMSF008K10+ ATCAATACTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTATATCTTCTAA
____________________________________________________________
consensus ATCAATATTGGGATTTGATTCAGACTTTACAAAATAGTAAAAAAGTTGTATATCTTCTGA
. : . : . : . : . : . :
JMSF026K04+ TTCCCCAACACTGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAT
JMSF037P14+ TTCCCCAACACTGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAT
JMSF048P04+ TTCCCCAACACTGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAT
JMSF016K12+ TTCTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAA
JMSF040C24+ TTCTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCAGGTCGAAC
JMSF048M03+ TTCTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAA
JMSF018J04+ TCCCCAACACTGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAT
JMSF029G08+ TTCTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAA
JMSF011O05+ TTCTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCAGGTCGAAC
JMSF016G07+ CTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCAGGTCGAAC
JMSF008K10+ TTCTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCAGGTCGAAC
____________________________________________________________
consensus TTCTCCAACACCGATATATCCGGTTTCAAGTTCAAATGGAAGAGGCCCTTCATGTCGAAT
. : . : . : . : . : . :
JMSF026K04+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATCATGTGAAGAGCAAAACCA
JMSF037P14+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATCATGTGAAGAGCAAAACCA
JMSF048P04+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATCATGTGAAGAGCAAAACCA
JMSF016K12+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATGATGTGAAGAGCAAAACCA
JMSF040C24+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTGCAACATGATGTGAAGAGCAAAACCA
JMSF048M03+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATGATGTGAAGAGCAAAACCA
JMSF018J04+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATCATGTGAAGAGCAAAACCA
JMSF029G08+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATGATGTGAAGAGCAAAACCA
JMSF011O05+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTGCGACATGATGTGAAGAGCAAAACCA
JMSF016G07+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTGCAACATGATGTGAAGAGCAAAACCA
JMSF008K10+ CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTGCGACATGATGTGAAGAGCAAAACCA
____________________________________________________________
consensus CCCTGGGAGATACTCCACCTTAGAGCCTGTTGCTTCAACATGATGTGAAGAGCAAAACCA
. : . : . : . : . : . :
JMSF026K04+ TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAG---CTTCGTCGCAAAAG
JMSF037P14+ TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAG---CTTCGTCGCAAAAG
JMSF048P04+ TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAG---CTTCGTCGCAAAAG
JMSF016K12+ TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAGCTTCTTCGTCGCCAAAG
JMSF040C24+ TAAAACAACGACGGTTCCTAGAAGCAAGGGAAGAGAACCGGAGCATCTTCGTCGCAAAAG
JMSF048M03+ TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAGCTTCTTCGTCGCCAAAG
JMSF018J04+ TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAG---CTTCGTCGCAAAAG
JMSF029G08+ TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAGCTTCTTCGTCGCCAAAG
JMSF011O05+ TAAAACAACGACGGTTCCTAGAAGCAAGGGAAGAGAACCGGAGCATCTTCGTCGCAAAAG
JMSF016G07+ TAAAACAACGACGGTTCCTAGAAGCAAGGGAAGAGAACCGGAGCATCTTCGTCGCAAAAG
JMSF008K10+ TAAAACAACGACGGTTCCTAGAAGCAAGGGAAGAGAACCGGAGCATCTTCGTCGCAAAAG
____________________________________________________________
consensus TAAAACAACGACAGTTCCTAGAAGCAAAGGAAGAGAACTGCAGCATCTTCGTCGCAAAAG
. : . : . : . : . : . :
JMSF026K04+ ATTTGCCAATAACATTTTCGTCAAATTTAATTTACCGGTCAGAAGAAGAAAAGGCA
JMSF037P14+ ATTTGCCAATAACATTTTCGTCAAATTTAATTTACCGGTCAGAAGAAGAAAAGGCAC
JMSF048P04+ ATTTGCCAATAACATTTTCGTCAAATTTAATTTACCGGTCAGAAGAAGAAAAGGCAC
JMSF016K12+ ATTTGCGAACAACATTTTCGTCAAATTTAATTTAATTGTTAGAAGAAGAAAAGGCC
JMSF040C24+ ATTTGCCAACAACATTTTCGTCAAATTTAATTTAATTGTCAGAAGAAGAAAAGGCC
JMSF048M03+ ATTTGCGAACAACATTTTCGTCAAATTTAATTTAATTGTTAGAAGAAGAAAAGGCC
JMSF018J04+ ATTTGCCAATAACATTTTCGTCAAATTTAATTTACCGGTCAGAAGAAGAAAAGGCAC
JMSF029G08+ ATTTGCGAACAACATTTTCGTCAAATTTAATTTAATTGTTAGAAGAAGAAAAGGCCC
JMSF011O05+ ATTTGCCAACAACATTTTCGTCAAATTTAATTTAATTGTCAGAAGAAGAAAAGGCCC
JMSF016G07+ ATTTGCCAACAACATTTTCGTCAAATTTAATTTAATTGTCAGAAGAAGAAAAGGCAC
JMSF008K10+ ATTTGCCAACAACATTTTCGTCAAATTTAATTTAATTGTCAGAAGAAGAAAAGGCCCATG
____________________________________________________________
consensus ATTTGCCAACAACATTTTCGTCAAATTTAATTTAATTGTCAGAAGAAGAAAAGGCCCATG