Contig 003561:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007L09Sequence443003561 (2)ref|XP_004134516.1|3e-10PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic-like isofo757003561 (2)ref|XP_006357064.1|4e-60PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic-like [Sola

Alignment

This contig is upended


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rJMSF007L09-                  ATATCATTATACACTATTTTCTTTAGAAAAATGTATTGTGACAAGTTCTTTT
                      ____________________________________________________________
consensus                     ATATCATTATACACTATTTTCTTTAGAAAAATGTATTGTGACAAGTTCTTTT
 
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rJMSF007L09-          AATAAACTTTTTAGGTTTTTGGCCAGAGTACAGAAAGATTGAAGGTTTAGAACCATAATA
                      ____________________________________________________________
consensus             AATAAACTTTTTAGGTTTTTGGCCAGAGTACAGAAAGATTGAAGGTTTAGAACCATAATA
 
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rJMSF007L09-          GGCACAGACAACCTGATTGATCTTCTAATGAATCTGTGGGTTTCTGGACCACCATACTTT
                      ____________________________________________________________
consensus             GGCACAGACAACCTGATTGATCTTCTAATGAATCTGTGGGTTTCTGGACCACCATACTTT
 
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rJMSF007L09-          CTCAACTATATATCAAGCTTTGCCAACGAACTCGACATCAAACAAAAGAACTGAATCAGG
                      ____________________________________________________________
consensus             CTCAACTATATATCAAGCTTTGCCAACGAACTCGACATCAAACAAAAGAACTGAATCAGG
 
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rJMSF007L09-          CGGAATAATGCATGAACCTCCTCTACAGCCAGCCCCTCGCATTCCATATCCAAGCTCAGG
                      ____________________________________________________________
consensus             CGGAATAATGCATGAACCTCCTCTACAGCCAGCCCCTCGCATTCCATATCCAAGCTCAGG
 
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rJMSF007L09-          AGGAATCTTCAGTTTACGTTTTCCTCCAGCTAACATGGGAGGAATACCATCACCTCCTAG
                      ____________________________________________________________
consensus             AGGAATCTTCAGTTTACGTTTTCCTCCAGCTAACATGGGAGGAATACCATCACCTCCTAG
 
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rJMSF007L09-          AATTCCCTGATCCCAGCCTTTAATGACCTCACCAACACCAACGCGAAACGTGAGAGGCTT
                      ____________________________________________________________
consensus             AATTCCCTGATCCCAGCCTTTAATGACCTCACCAACACCAACGCGAAACGTGAGAGGCTT
 
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rJMSF007L09-          CCCCCGGTTGTAGCTGCTGTCAAAGACCTTCCCATTCTCCAACTTACCTGTATAGTGTGC
                      ____________________________________________________________
consensus             CCCCCGGTTGTAGCTGCTGTCAAAGACCTTCCCATTCTCCAACTTACCTGTATAGTGTGC
 
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rJMSF007L09-          CTTAATGAGCTGGCCTTTTTCAGCCTGAGGACCAAACCCCAAAACCTTATCGCAATAGGC
JMSF007L09+                  AGCTGGCCTTTTTCAGCCTGAGGACCAAACCCCAAAACCTTATCGCAATAGGC
                      ____________________________________________________________
consensus             CTTAATGAGCTGGCCTTTTTCAGCCTGAGGACCAAACCCCAAAACCTTATCGCAATAGGC
 
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rJMSF007L09-          AAGCCCAGAAGGCGCGGCCGTGAACTCACACGCCGACGTTGTTTCTTCAGCAGCTGCGGA
JMSF007L09+           AAGCCCAGAAGGCGCGGCCGTGAACTCACACGCCGACGTTGTTTCTTCAGCAGCTGCGGA
                      ____________________________________________________________
consensus             AAGCCCAGAAGGCGCGGCCGTGAACTCACACGCCGACGTTGTTTCTTCAGCAGCTGCGGA
 
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rJMSF007L09-          TTGCCGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCCTCTCTCC    
JMSF007L09+           TTGCCGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCCTCTCTCCTCCC
                      ____________________________________________________________
consensus             TTGCCGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCCTCTCTCCTCCC
 
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JMSF007L09+           CAGCACAACTGGCCGCCGCTGTTCCTCCCTCGCCGGAGATCCGGAACTGCAAATCTTCGG
                      ____________________________________________________________
consensus             CAGCACAACTGGCCGCCGCTGTTCCTCCCTCGCCGGAGATCCGGAACTGCAAATCTTCGG
 
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JMSF007L09+           CGTGCTGCAGCCAGTGTGGACTGACGGCGAGACTACTGTTGAGAAGGGTGCGGTGGGCAG
                      ____________________________________________________________
consensus             CGTGCTGCAGCCAGTGTGGACTGACGGCGAGACTACTGTTGAGAAGGGTGCGGTGGGCAG
 
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JMSF007L09+           TGAGTTGGTGATGAGAGTGCAATGCTTTGTGGAGTTGAAGAAGGAAGATGGGAGAGAGTG
                      ____________________________________________________________
consensus             TGAGTTGGTGATGAGAGTGCAATGCTTTGTGGAGTTGAAGAAGGAAGATGGGAGAGAGTG
 
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JMSF007L09+           AGAGTACATCTCCACAGGGATATGATGATACAAATTCAGAGCTTATATTAGTTTAAGGTC
                      ____________________________________________________________
consensus             AGAGTACATCTCCACAGGGATATGATGATACAAATTCAGAGCTTATATTAGTTTAAGGTC