Contig 003561:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007L09Sequence443003561 (2)ref|XP_004134516.1|3e-10PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic-like isofo757003561 (2)ref|XP_006357064.1|4e-60PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic-like [Sola

Alignment

This contig is upended


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rJMSF007L09- ATATCATTATACACTATTTTCTTTAGAAAAATGTATTGTGACAAGTTCTTTT
                      ____________________________________________________________
consensus ATATCATTATACACTATTTTCTTTAGAAAAATGTATTGTGACAAGTTCTTTT
 
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rJMSF007L09- AATAAACTTTTTAGGTTTTTGGCCAGAGTACAGAAAGATTGAAGGTTTAGAACCATAATA
                      ____________________________________________________________
consensus AATAAACTTTTTAGGTTTTTGGCCAGAGTACAGAAAGATTGAAGGTTTAGAACCATAATA
 
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rJMSF007L09- GGCACAGACAACCTGATTGATCTTCTAATGAATCTGTGGGTTTCTGGACCACCATACTTT
                      ____________________________________________________________
consensus GGCACAGACAACCTGATTGATCTTCTAATGAATCTGTGGGTTTCTGGACCACCATACTTT
 
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rJMSF007L09- CTCAACTATATATCAAGCTTTGCCAACGAACTCGACATCAAACAAAAGAACTGAATCAGG
                      ____________________________________________________________
consensus CTCAACTATATATCAAGCTTTGCCAACGAACTCGACATCAAACAAAAGAACTGAATCAGG
 
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rJMSF007L09- CGGAATAATGCATGAACCTCCTCTACAGCCAGCCCCTCGCATTCCATATCCAAGCTCAGG
                      ____________________________________________________________
consensus CGGAATAATGCATGAACCTCCTCTACAGCCAGCCCCTCGCATTCCATATCCAAGCTCAGG
 
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rJMSF007L09- AGGAATCTTCAGTTTACGTTTTCCTCCAGCTAACATGGGAGGAATACCATCACCTCCTAG
                      ____________________________________________________________
consensus AGGAATCTTCAGTTTACGTTTTCCTCCAGCTAACATGGGAGGAATACCATCACCTCCTAG
 
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rJMSF007L09- AATTCCCTGATCCCAGCCTTTAATGACCTCACCAACACCAACGCGAAACGTGAGAGGCTT
                      ____________________________________________________________
consensus AATTCCCTGATCCCAGCCTTTAATGACCTCACCAACACCAACGCGAAACGTGAGAGGCTT
 
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rJMSF007L09- CCCCCGGTTGTAGCTGCTGTCAAAGACCTTCCCATTCTCCAACTTACCTGTATAGTGTGC
                      ____________________________________________________________
consensus CCCCCGGTTGTAGCTGCTGTCAAAGACCTTCCCATTCTCCAACTTACCTGTATAGTGTGC
 
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rJMSF007L09- CTTAATGAGCTGGCCTTTTTCAGCCTGAGGACCAAACCCCAAAACCTTATCGCAATAGGC
JMSF007L09+ AGCTGGCCTTTTTCAGCCTGAGGACCAAACCCCAAAACCTTATCGCAATAGGC
                      ____________________________________________________________
consensus CTTAATGAGCTGGCCTTTTTCAGCCTGAGGACCAAACCCCAAAACCTTATCGCAATAGGC
 
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rJMSF007L09- AAGCCCAGAAGGCGCGGCCGTGAACTCACACGCCGACGTTGTTTCTTCAGCAGCTGCGGA
JMSF007L09+ AAGCCCAGAAGGCGCGGCCGTGAACTCACACGCCGACGTTGTTTCTTCAGCAGCTGCGGA
                      ____________________________________________________________
consensus AAGCCCAGAAGGCGCGGCCGTGAACTCACACGCCGACGTTGTTTCTTCAGCAGCTGCGGA
 
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rJMSF007L09- TTGCCGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCCTCTCTCC
JMSF007L09+ TTGCCGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCCTCTCTCCTCCC
                      ____________________________________________________________
consensus TTGCCGCAATCCAACAGCCCCCAAACACAATCCTAACACCCCAATCGCCTCTCTCCTCCC
 
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JMSF007L09+ CAGCACAACTGGCCGCCGCTGTTCCTCCCTCGCCGGAGATCCGGAACTGCAAATCTTCGG
                      ____________________________________________________________
consensus CAGCACAACTGGCCGCCGCTGTTCCTCCCTCGCCGGAGATCCGGAACTGCAAATCTTCGG
 
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JMSF007L09+ CGTGCTGCAGCCAGTGTGGACTGACGGCGAGACTACTGTTGAGAAGGGTGCGGTGGGCAG
                      ____________________________________________________________
consensus CGTGCTGCAGCCAGTGTGGACTGACGGCGAGACTACTGTTGAGAAGGGTGCGGTGGGCAG
 
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JMSF007L09+ TGAGTTGGTGATGAGAGTGCAATGCTTTGTGGAGTTGAAGAAGGAAGATGGGAGAGAGTG
                      ____________________________________________________________
consensus TGAGTTGGTGATGAGAGTGCAATGCTTTGTGGAGTTGAAGAAGGAAGATGGGAGAGAGTG
 
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JMSF007L09+ AGAGTACATCTCCACAGGGATATGATGATACAAATTCAGAGCTTATATTAGTTTAAGGTC
                      ____________________________________________________________
consensus AGAGTACATCTCCACAGGGATATGATGATACAAATTCAGAGCTTATATTAGTTTAAGGTC