Contig 003557:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007H20-                                 TGCTTTCATTACGTACTTCCGTAGTTTTATAGATCCA
                      ____________________________________________________________
consensus                                    TGCTTTCATTACGTACTTCCGTAGTTTTATAGATCCA
 
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rJMSF007H20-          CAAATCTATAATTGGCATTCAAACTGCTAAACTGATCTCAAGTCTTCAAAATATCTCCTC
                      ____________________________________________________________
consensus             CAAATCTATAATTGGCATTCAAACTGCTAAACTGATCTCAAGTCTTCAAAATATCTCCTC
 
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JMFN028C06+                                 TTCCTCCGATTCCGGCCGTGGTTCACCGGCGGTCCCGA
rJMSF007H20-          TTTCACTCGGGATTTGATCTCTTTCCTCCGATTCCGGCCGTGGTTCACCGGCGGTCCCGA
                      ____________________________________________________________
consensus             TTTCACTCGGGATTTGATCTCTTTCCTCCGATTCCGGCCGTGGTTCACCGGCGGTCCCGA
 
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JMFN028C06+           CTNTCCGGCGTCCAACGGGAAGTTGAGAATTGCTTTCCTACCTCTCATCTTGAACGCAGC
rJMSF007H20-          CTTTCCGGCGTCCAACGGGAAGTTGAGAATTGCTTTCCTACCTCTCATCTTGAACGCAGC
                      ____________________________________________________________
consensus             CTTTCCGGCGTCCAACGGGAAGTTGAGAATTGCTTTCCTACCTCTCATCTTGAACGCAGC
 
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JMFN028C06+           ACAATCGTAGGCTCTAGCAGCGTCAATGTCGGTATCGTAAGTTCCCAACCAGATTCGCGA
rJMSF007H20-          ACAATCGTAGGCTCTAGCAGCGTCAATGTCGGTATCGTAAGTTCCCAACCAGATTCGCGA
                      ____________________________________________________________
consensus             ACAATCGTAGGCTCTAGCAGCGTCAATGTCGGTATCGTAAGTTCCCAACCAGATTCGCGA
 
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JMFN028C06+           TCCTTTCCGGGTCGGGTCTCGGATCTCCGCCGCGAACTTCCCCCACGGCCTCCTCCGAAC
rJMSF007H20-          TCCTTTCCGGGTCGGGTCTCGGATCTCCGCCGCGAACTTCCCCCACGGCCTCCTCCGAAC
                      ____________________________________________________________
consensus             TCCTTTCCGGGTCGGGTCTCGGATCTCCGCCGCGAACTTCCCCCACGGCCTCCTCCGAAC
 
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JMFN028C06+           TCCTCTGTAACGCCTCCCCTTCCCGCCGTTACCGGATTCCTTGTTTGCACCCGCGGAATT
rJMSF007H20-          TCCTCTGTAACGCCTCCCCTTCCCGCCGTTACCGGATTCCTTGTTTGCACCCGCGGAATT
                      ____________________________________________________________
consensus             TCCTCTGTAACGCCTCCCCTTCCCGCCGTTACCGGATTCCTTGTTTGCACCCGCGGAATT
 
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JMFN028C06+           CTGCGTTGTCGAGCTTGAATCGGGAGTGGAGCGAACAATAATATCGGGTTTGGTTTCGAA
rJMSF007H20-          CTGCGTTGTCGAGCTTGAATCGGGAGTGGAGCGAACAATAATATCGGGTTTGGTTTCGAA
                      ____________________________________________________________
consensus             CTGCGTTGTCGAGCTTGAATCGGGAGTGGAGCGAACAATAATATCGGGTTTGGTTTCGAA
 
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JMFN028C06+           CTCGGGGAAATCGAGCTCCAGGTTGAGGTAACGTGAGACCGGCGATTCAGGTCGCTTTAG
rJMSF007H20-          CTCGGGGAAATCGAGCTCCAGGTTGAGGTAACGTGAGACCGGCGATTCAGGTCGCTTTAG
                      ____________________________________________________________
consensus             CTCGGGGAAATCGAGCTCCAGGTTGAGGTAACGTGAGACCGGCGATTCAGGTCGCTTTAG
 
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JMFN028C06+           GTCCGGAACGGGAGAGACCGAGTCCGAAACGGAAGTAGAAGATTCCGGCTTATCGGAGCC
rJMSF007H20-          GTCCGGAACGGGAGAGACCGAGTCCGAAACGGAAGTAGAAGATTCCGGCTTATCGGAGCC
                      ____________________________________________________________
consensus             GTCCGGAACGGGAGAGACCGAGTCCGAAACGGAAGTAGAAGATTCCGGCTTATCGGAGCC
 
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JMFN028C06+           GGAAAACGGGTGGTAGTCGTTGAAGTCGTCGTCGGGAAAACAGAAGCCGAGGTTTCCGAT
rJMSF007H20-          GGAAAACGGCCGGTAGTCGTTGAAGTCGTCGTCGGGAAAACAGAAGCCGAGGTTTCCGAT
JMSF007H20+                                                AAACAGAAGCCGAGGTTTCCGAT
                      ____________________________________________________________
consensus             GGAAAACGGGTGGTAGTCGTTGAAGTCGTCGTCGGGAAAACAGAAGCCGAGGTTTCCGAT
 
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JMFN028C06+           GAATGCTTCAGTGGAAGCAAAGTCCCCGAGGAGGTATTGGCTTATCAATTCCAACGTCAT
rJMSF007H20-          GAATGCTTCAGTGGAAGCAAAGTCCCCGAGGAGGTATTGGCTTATCAATTCCAACGTCAT
JMSF007H20+           GAATGCTTCAGTGGAAGCAAAGTCCCCGAGGAGGTATTGGCTTATCAATTCCAACGTCAT
                      ____________________________________________________________
consensus             GAATGCTTCAGTGGAAGCAAAGTCCCCGAGGAGGTATTGGCTTATCAATTCCAACGTCAT
 
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JMFN028C06+           GAACTCATCTGTTGTCGTCATCATGCATGTATCATTCATCTGCCTGTCTTCCATGCCTGC
rJMSF007H20-          GAACTCATCTGTTGTCGTCATCATGCATGTATCATTCATCTGCCTGTCTTCCATGCCTGC
JMSF007H20+           GAACTCATCTGTNGTCGTCATCATGCATGTATCATTCATCTGCCTGTCTTCCATGCCTGC
                      ____________________________________________________________
consensus             GAACTCATCTGTTGTCGTCATCATGCATGTATCATTCATCTGCCTGTCTTCCATGCCTGC
 
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JMFN028C06+           T                                                           
rJMSF007H20-          TGTATATATGTAGAAG                                            
JMSF007H20+           TGTATATATGTAGAAGAAGAAGAAGATGGGTATTGAAATCTTGAGACTTGCAGGATATGG
                      ____________________________________________________________
consensus             TGTATATATGTAGAAGAAGAAGAAGATGGGTATTGAAATCTTGAGACTTGCAGGATATGG
 
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JMSF007H20+           ATATGACATATATATAGAATATAGATACATACATATACGTCATACGTGTGATATAAGTGT
                      ____________________________________________________________
consensus             ATATGACATATATATAGAATATAGATACATACATATACGTCATACGTGTGATATAAGTGT
 
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JMSF007H20+           ATGTATTTAATGGCAATATCACTTGTGCAGTGGCGCAGTGGGTTTGGGCAAAAAAGCGGT
                      ____________________________________________________________
consensus             ATGTATTTAATGGCAATATCACTTGTGCAGTGGCGCAGTGGGTTTGGGCAAAAAAGCGGT
 
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JMSF007H20+           TTGCACGCTGGTTTAGCTGGAATCATCTATCAGCGGATATAGATTTTTTCATGTTGCCTC
                      ____________________________________________________________
consensus             TTGCACGCTGGTTTAGCTGGAATCATCTATCAGCGGATATAGATTTTTTCATGTTGCCTC