| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016B11 | Sequence | 508 | 003554 (4) | ref|XP_009799957.1| | 1e-50 | PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl | 751 | 001085 (4) | ref|XP_009799957.1| | 2e-44 | PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl |
| JMSF007A06 | Sequence | 259 | 003554 (4) | ref|XP_009591737.1| | 3e-11 | PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana tom | 776 | 001085 (4) | ref|XP_004250472.1| | 2e-148 | PREDICTED: cationic amino acid transporter 7, chloroplastic [Solanum lycopersic |
| JMSF017F13 | Sequence | 561 | 003554 (4) | ref|XP_009799957.1| | 2e-62 | PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl | 725 | 001085 (4) | ref|XP_004250472.1| | 3e-117 | PREDICTED: cationic amino acid transporter 7, chloroplastic [Solanum lycopersic |
| JMSF021M06 | Sequence | 661 | 003554 (4) | ref|XP_009799957.1| | 4e-78 | PREDICTED: cationic amino acid transporter 7, chloroplastic-like [Nicotiana syl | 664 | 001085 (4) | ref|XP_004250472.1| | 6e-102 | PREDICTED: cationic amino acid transporter 7, chloroplastic [Solanum lycopersic |
This contig is upended
. : . : . : . : . : . :
JMSF021M06+ T
____________________________________________________________
consensus T
. : . : . : . : . : . :
JMSF021M06+ CGTTGAAGCCTTTTGGCAGAGCGGAGATGGTGATTCTCAGCTTCGTTACGTGCGGTAGGC
____________________________________________________________
consensus CGTTGAAGCCTTTTGGCAGAGCGGAGATGGTGATTCTCAGCTTCGTTACGTGCGGTAGGC
. : . : . : . : . : . :
JMSF017F13+ TCCTCGCCACGGCGGCGTTGG
JMSF021M06+ GGCGTAGGCCGATGGTTGTGCATAAGTACCCCGTGAAGCTCCTCGCCACGGCGGCGTTGG
____________________________________________________________
consensus GGCGTAGGCCGATGGTTGTGCATAAGTACCCCGTGAAGCTCCTCGCCACGGCGGCGTTGG
. : . : . : . : . : . :
JMSF017F13+ AGGGGACGTAATCGATGATTAGGTTAGCTCCGGTTATGAATGCCAGAAATTCCCCGAATG
JMFF016B11+ GGTTATGAATGCCAGAAATTCCCCGGATG
JMSF021M06+ AGAGGACGTAATCGATGATTAGGTTAGCTCCGGTTATGAATGCCAGAAATTCCCCGAATG
____________________________________________________________
consensus AGGGGACGTAATCGATGATTAGGTTAGCTCCGGTTATGAATGCCAGAAATTCCCCGAATG
. : . : . : . : . : . :
JMSF017F13+ TAGTGCGGATGTAGCTGAAAGCGCCGCCGGCGACAGGCATCTCGACGGCGAACTCGGTGT
JMFF016B11+ TAGTGCGGATGTAGCTGAAAGCGCCGCCGGCGACAGGCATCTCGACGGCGAACTCGGTGT
JMSF021M06+ TAGTGCGGATGTAGCTGAAAGCGCCGCCGGCGACAGGCATCTCGACGGCGAACTCGGTGT
____________________________________________________________
consensus TAGTGCGGATGTAGCTGAAAGCGCCGCCGGCGACAGGCATCTCGACGGCGAACTCGGTGT
. : . : . : . : . : . :
JMSF017F13+ AGCAGAACGCTGAGAGGAGGGCGCAGAGACCGGCAATGGCGAAGGACAGGATAACGGCAG
JMFF016B11+ AGCAGAACGCTGAGAGGAGGGCGCAGAGACCGGCAATGGCGAAGGACAGGATAACGGCAG
JMSF021M06+ AGCAGAACGCTGAGAGGAGGGCGCAGAGACCGGCAATGGCGAAGGACAGGATAACGGCAG
____________________________________________________________
consensus AGCAGAACGCTGAGAGGAGGGCGCAGAGACCGGCAATGGCGAAGGACAGGATAACGGCAG
. : . : . : . : . : . :
JMSF017F13+ GGCCGGCACAGTCATGGCTGGCGTGACCGGCGGTCACGAAGATGCCGGCGCCGACCATCC
JMFF016B11+ GGCCGGCACAGTCATGGCTGGCGTGACCGGCGGTCACGAAGATGCCGGCGCCGACCATCC
JMSF021M06+ GGCCGGCACAGTCATGGCTGGCGTGACCGGCGGTCACGAAGATGCCGGCGCCGACCATCC
____________________________________________________________
consensus GGCCGGCACAGTCATGGCTGGCGTGACCGGCGGTCACGAAGATGCCGGCGCCGACCATCC
. : . : . : . : . : . :
JMSF017F13+ CGCCGAGGCCGAAGCCGACCAAGTCGTACCACCGGAGACTCCTCTTCATGCCGCCCCCTG
JMFF016B11+ CGCCGAGGCCGAAGCCGACCAAGTCGTACCACCGGAGACTCCTCTTCATGCCGCCCCCTG
JMSF021M06+ CGCCGAGGCCGAAGCCGACCAAGTCGTACCACCGGAGACTCCTCTTCATGCCGCCCCCTG
JMSF007A06+ CTCTTCATGCCGCCCCCTG
____________________________________________________________
consensus CGCCGAGGCCGAAGCCGACCAAGTCGTACCACCGGAGACTCCTCTTCATGCCGCCCCCTG
. : . : . : . : . : . :
JMSF017F13+ ACAGAGCGCGGACGTGGCTCGTCTCCTCTAACGACGTGGAGACAGAGCCCGCCCGGAGCG
JMFF016B11+ ACAGAGCGCGGACGTGGCTCGTCTCCTCTAACGACGTGGAGACAGAGCCCGCCCGGAGCG
JMSF021M06+ ACAGAGCGCGGACGTGGCTCGTCTCCTCTAACGACGTGGAGACAGAGCCCGCCCGGAGCG
JMSF007A06+ ACAGAGCGCGGACGTGGCTCGTCTCCTCTAACGACGTGGAGACAGAGCCCGCCCGGAGCG
____________________________________________________________
consensus ACAGAGCGCGGACGTGGCTCGTCTCCTCTAACGACGTGGAGACAGAGCCCGCCCGGAGCG
. : . : . : . : . : . :
JMSF017F13+ CCAGGCGGCGAGGGGTATCGGAGAGTGCCCGGACGTAAGCGTGAAAGCTAGAGAAAGAGG
JMFF016B11+ CCAGGCGGCGAGGGGTATCGGAGAGTGCCCGGACGTAAGCGTGAAAGCTAGAGAAAGAGG
JMSF021M06+ CCAGGCGGCGAGGGGTATCGGAGAGTGCCCGGACGTAAGCGTGAAAGCTAGAGAAAGAGG
JMSF007A06+ CCAGGCGGCGAGGGGTATCGGAGAGTGCCCGGACGTAAGCGTGAAAGCTAGAGAAAGAGG
____________________________________________________________
consensus CCAGGCGGCGAGGGGTATCGGAGAGTGCCCGGACGTAAGCGTGAAAGCTAGAGAAAGAGG
. : . : . : . : . : . :
JMSF017F13+ AAGCCTCATTCTTCTCCATTAGCAAAACCCTTCACTCACTCACAAACTCTGTACTGCAGT
JMFF016B11+ AAGCCTCATTCTTCTCCATTAGCAAAACCCTTCACTCACTCACAAACTCTGTACTGCAGT
JMSF021M06+ AAGCCTCATTCTTCTCCATTAGCAAAACCCTTCACTCACTCACAAACTCTGTACTGCAGT
JMSF007A06+ AAGCCTCATTCTTCTCCATTAGCAAAACCCTTCACTCACTCACAAACTCTGTACTGCAGT
____________________________________________________________
consensus AAGCCTCATTCTTCTCCATTAGCAAAACCCTTCACTCACTCACAAACTCTGTACTGCAGT
. : . : . : . : . : . :
JMSF017F13+ TTGAGTTTTAGACTATATTTGCGCATATAGATACAGAGTTTCTGTGATGATGATGG
JMFF016B11+ TTGAGTTTTAGACTATATTTGCGCATATAGATACAGAGTTTCTGTGATGATGATGG
JMSF021M06+ TTGAGTTTTAGACTATATTTGCGCATATAGATACAGAGTTTCTGTGATGATGATGG
JMSF007A06+ TTGAGTTTTAGACTATATTTGCGCATATAGATACAGAGTTTCTGTGATGATGATGGGGCC
____________________________________________________________
consensus TTGAGTTTTAGACTATATTTGCGCATATAGATACAGAGTTTCTGTGATGATGATGGGGCC