Contig 003549:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050L22+                             GTATTGAGCTGAATTTTCTTNGGAGCCTNTTCTTTCTTTACA
                      ____________________________________________________________
consensus                               GTATTGAGCTGAATTTTCTTNGGAGCCTNTTCTTTCTTTACA
 
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JMSF050L22+           GTCCTATTAGTGGCNTTTTCTTTATTTCCGTCTTCTTCATTACTTGTAGATCTTTTCTTT
                      ____________________________________________________________
consensus             GTCCTATTAGTGGCNTTTTCTTTATTTCCGTCTTCTTCATTACTTGTAGATCTTTTCTTT
 
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JMSF050L22+           TTCCGGTAGGTTTTGGTAACCTCTTTTAATGATAAATCTACTTCTTGGCTAGACATAGTT
                      ____________________________________________________________
consensus             TTCCGGTAGGTTTTGGTAACCTCTTTTAATGATAAATCTACTTCTTGGCTAGACATAGTT
 
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JMSF050L22+           GCTGTTGGATGATTTTCNTAAGCCACATATCCTCACAGACNACACTAGAACCCAGAATGA
                      ____________________________________________________________
consensus             GCTGTTGGATGATTTTCNTAAGCCACATATCCTCACAGACNACACTAGAACCCAGAATGA
 
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JMSF050L22+           GAAAGCCNAATTCNGAAGCAGGCGAATTAATGGTCCTCCCATCCGAATCCTCAAAANGAG
JMSF006J17+                           AGCAGGCAAAGTAATGGTCCTCCCATCCGAATCCTCAAAAAGAG
                      ____________________________________________________________
consensus             GAAAGCCNAATTCNGAAGCAGGCGAATTAATGGTCCTCCCATCCGAATCCTCAAAAAGAG
 
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JMSF050L22+           AATACAAATCAGCACAATCCATGGAAAATGTGAGGCGTTCTGGTGTTAGATCAAGCCCAA
JMSF006J17+           AATAGAAATCAACACAATCCATGG-AAATGTGTGGCGTTGCGGTGTTAGATCAAGCGCAA
                      ____________________________________________________________
consensus             AATAGAAATCAGCACAATCCATGGAAAATGTGTGGCGTTGTGGTGTTAGATCAAGCGCAA
 
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JMSF050L22+           CATCTCCAATTAACAATGCAGCGNTGAANCGAGTACTGGGAATACCTCTGAGCAACAATG
JMSF006J17+           CATCACCAATTAACAAAGCGGCGCTGAAACAAGTACTGGGAATACCACTGAGCAGCAATG
                      ____________________________________________________________
consensus             CATCTCCAATTAACAATGCGGCGCTGAAACGAGTACTGGGAATACCTCTGAGCAGCAATG
 
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JMSF050L22+           GCGAAGCGTCGAA                                               
JMSF006J17+           GCGAAACGTCGAAGTAGAGGAGGAGGGCGGTGTGGCGGAGGAAAGCTTATCACAGGGCGG
                      ____________________________________________________________
consensus             GCGAAGCGTCGAAGTAGAGGAGGAGGGCGGTGTGGCGGAGGAAAGCTTATCACAGGGCGG
 
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JMSF006J17+           AGCACTGGAGCAGAAACCCTAAAGTCTCTAAAATAATTGCGCTAAATGCGGTGTTTATGC
                      ____________________________________________________________
consensus             AGCACTGGAGCAGAAACCCTAAAGTCTCTAAAATAATTGCGCTAAATGCGGTGTTTATGC
 
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JMSF006J17+           ACGATGAGAAGAAATGCAAGAAAATACAATTACGTCTATACAATAAATAATAATTTGGTC
                      ____________________________________________________________
consensus             ACGATGAGAAGAAATGCAAGAAAATACAATTACGTCTATACAATAAATAATAATTTGGTC