Contig 003545:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003C22Sequence368003545 (2)ref|XP_011099415.1|9e-20PREDICTED: DEAD-box ATP-dependent RNA helicase 16 [Sesamum indicum]771017056ref|XP_009596050.1|3e-86PREDICTED: DEAD-box ATP-dependent RNA helicase 16 [Nicotiana tomentosiformis]
JMSF006D21Sequence367003545 (2)ref|XP_011099415.1|2e-21PREDICTED: DEAD-box ATP-dependent RNA helicase 16 [Sesamum indicum]

Alignment

This contig is upended


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JMSF003C22+                                                               CTGAAGCA
                      ____________________________________________________________
consensus                                                                 CTGAAGCA
 
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JMSF003C22+           ANGAAGGAGGTAGGCGAAGGTCTTTCCAGAACCAGTCTTTGCTCGCGCAACCACATCTTT
JMSF006D21+             GAAGGAGGTAGGCGAAGGTCTTTCCAGAACCAGTCTTTGCTCGCGCAACCACATCTTT
                      ____________________________________________________________
consensus             ANGAAGGAGGTAGGCGAAGGTCTTTCCAGAACCAGTCTTTGCTCGCGCAACCACATCTTT
 
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JMSF003C22+           ACCTTCAAGGATAAGAGGGATAGCAACGCGCTGGATGGGAGTTGGTTTCTCAATGCTTTT
JMSF006D21+           ACCTTCAAGGATAAGAGGGATAGCAACGCGCTGGATGGGAGTTGGTTTCTCAATGCTTTT
                      ____________________________________________________________
consensus             ACCTTCAAGGATAAGAGGGATAGCAACGCGCTGGATGGGAGTTGGTTTCTCAATGCTTTT
 
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JMSF003C22+           CTTGCTAAGAGCACGGACAAGTCGAGGGTCCAGACCTAATTCTTCGAACGTCTGCTCTTC
JMSF006D21+           CTTGCTAAGAGCACGGACAAGTCGAGGGTCCAGACCTAATTCTTCGAACGTCTGCTCTTC
                      ____________________________________________________________
consensus             CTTGCTAAGAGCACGGACAAGTCGAGGGTCCAGACCTAATTCTTCGAACGTCTGCTCTTC
 
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JMSF003C22+           TTCTTCACCATCTGACGACTCCGCATTTGGCTGCTCTTCTTCGGGATGTTGTTCTTCGTT
JMSF006D21+           TTCTTCACCATCTGACGACTCCGCATTTGGCTGCTCTTCTTCGGGATGTTGTTCTTCGTT
                      ____________________________________________________________
consensus             TTCTTCACCATCTGACGACTCCGCATTTGGCTGCTCTTCTTCGGGATGTTGTTCTTCGTT
 
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JMSF003C22+           TGGCTCCTCTTCTTTTTCCTTGTGAATTCGTGATTTCTCCTTCTTCGCCATGGCAGAGTG
JMSF006D21+           TGGCTCCTCTTCTTTTTCCTTGTGAATTCGTGATTTCTCCTTCTTCGCCATGGCAGAGTG
                      ____________________________________________________________
consensus             TGGCTCCTCTTCTTTTTCCTTGTGAATTCGTGATTTCTCCTTCTTCGCCATGGCAGAGTG
 
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JMSF003C22+           CTGGAAGAGACGGAGAGCGACTGAATGAGAAAGGATAGGCGCCAAGGGTTTAGGGTT   
JMSF006D21+           CTGGAAGAGACGGAGAGCGACTGAATGAGAAAGGATAGGCGCCAAGGGTTTAGGGTTGCC
                      ____________________________________________________________
consensus             CTGGAAGAGACGGAGAGCGACTGAATGAGAAAGGATAGGCGCCAAGGGTTTAGGGTTGCC