Contig 003543:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001O09Sequence474003047 (3)emb|CDP08772.1|2e-10unnamed protein product [Coffea canephora]737003543 (6)ref|XP_009767889.1|5e-106PREDICTED: probable serine/threonine-protein kinase At1g01540 [Nicotiana sylves
JMFF040J21Sequence476003047 (3)emb|CDP08772.1|3e-11unnamed protein product [Coffea canephora]722003543 (6)ref|XP_009767889.1|1e-95PREDICTED: probable serine/threonine-protein kinase At1g01540 [Nicotiana sylves
JMFF047M02Sequence417003543 (6)ref|XP_011093121.1|2e-78PREDICTED: probable serine/threonine-protein kinase At1g01540 [Sesamum indicum]396003543 (6)ref|XP_009597781.1|6e-08PREDICTED: probable serine/threonine-protein kinase At1g01540 isoform X1 [Nicot
JMFN044L03Sequence632003543 (6)gb|KDP28584.1|1e-136hypothetical protein JCGZ_14355 [Jatropha curcas]
JMSF006A08Sequence250003543 (6)ref|XP_010059914.1|4e-23PREDICTED: probable serine/threonine-protein kinase At1g01540 [Eucalyptus grand

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF047M02- CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAGCCAAA
                      ____________________________________________________________
consensus CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAGCCAAA
 
. : . : . : . : . : . :
rJMFF047M02- TCCAATGAATCACTGTTATAAGAATATCAAATTATGGAGTAATATTATGAGATGTACAAC
rJMFF040J21- CTGTTATAAGAATATCAAATTATGGAGTAATATTATGAGATGTACAAC
rJMFF001O09- AATATTATGAGATGTACAAC
                      ____________________________________________________________
consensus TCCAATGAATCACTGTTATAAGAATATCAAATTATGGAGTAATATTATGAGATGTACAAC
 
. : . : . : . : . : . :
rJMFF047M02- TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
rJMFF040J21- TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
rJMFF001O09- TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
                      ____________________________________________________________
consensus TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
 
. : . : . : . : . : . :
rJMFF047M02- CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
rJMFF040J21- CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
rJMFF001O09- CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
                      ____________________________________________________________
consensus CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
 
. : . : . : . : . : . :
rJMFF047M02- CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
rJMFF040J21- CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
rJMFF001O09- CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
                      ____________________________________________________________
consensus CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
 
. : . : . : . : . : . :
rJMFF047M02- CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
rJMFF040J21- CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
rJMFF001O09- CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
                      ____________________________________________________________
consensus CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
 
. : . : . : . : . : . :
rJMFF047M02- CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTG
rJMFF040J21- CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTGTGATCACGGTGT
rJMFF001O09- CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTGTGATCACGGTGT
                      ____________________________________________________________
consensus CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTGTGATCACGGTGT
 
. : . : . : . : . : . :
rJMFF040J21- GAACTGGACGATTCTCTTCCAACCCTCCGTTCATCACGAAATAATACATCATCTGCCTCG
rJMFF001O09- GAACTGGACGATTCTCTTCCAATCCTCCGTTCATCACGAAATAATACATCATCTGCCTCG
JMFN044L03+ AAATAATACATCATCTGCCTCG
                      ____________________________________________________________
consensus GAACTGGACGATTCTCTTCCAATCCTCCGTTCATCACGAAATAATACATCATCTGCCTCG
 
. : . : . : . : . : . :
rJMFF040J21- AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
rJMFF001O09- AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
JMFN044L03+ AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
                      ____________________________________________________________
consensus AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
 
. : . : . : . : . : . :
rJMFF040J21- AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
rJMFF001O09- AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
JMFN044L03+ AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
                      ____________________________________________________________
consensus AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
 
. : . : . : . : . : . :
rJMFF040J21- TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
rJMFF001O09- TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
JMFN044L03+ TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
                      ____________________________________________________________
consensus TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
 
. : . : . : . : . : . :
rJMFF040J21- ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATGATA
rJMFF001O09- ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATTATA
JMFN044L03+ ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATGATA
                      ____________________________________________________________
consensus ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATGATA
 
. : . : . : . : . : . :
rJMFF040J21- AGTATTCCAAAGCTATAAATATCACTTTTTTCGTTCAGCATACCAGTGCAAGCATATTCC
rJMFF001O09- AGTATTCCAAAGCTATAAATATCACTTTTTTCATTCAGCATACCAGTGCAAGCATATTCC
JMFN044L03+ AGTATTCCAAAGCTATAAATATCACTTTTTTCATTCAGCATACCAGTGCAAGCATATTCC
JMFF047M02+ TTTTTCATTCAGCATACCAGTGCAAGCATATCCC
                      ____________________________________________________________
consensus AGTATTCCAAAGCTATAAATATCACTTTTTTCATTCAGCATACCAGTGCAAGCATATTCC
 
. : . : . : . : . : . :
rJMFF040J21- -GGGGCAACATATCC
rJMFF001O09- -GGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCA
JMFN044L03+ -GGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCATT
JMFF047M02+ GGGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCATT
                      ____________________________________________________________
consensus -GGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCATT
 
. : . : . : . : . : . :
JMFN044L03+ CAAGAGCTTAGCAAGCCCAAAGTCAGACAACTTCGTATGCCATTGCCGATCAAGGAGTAT
JMFF047M02+ CAAGAGCTTAGCAAGCNCAAAGTCAGACAACTTCGTATGCCATTGCCGATCAAGGAGTAT
                      ____________________________________________________________
consensus CAAGAGCTTAGCAAGCCCAAAGTCAGACAACTTCGTATGCCATTGCCGATCAAGGAGTAT
 
. : . : . : . : . : . :
JMFN044L03+ GTTACTGGATTTCACATCCCTATGCACTACTTTTGGTTCAAGACCCTCATGTAGATAGGC
JMFF047M02+ GTTACTGGATTTCACATCCCTATGCACTACTTTTGGTTCAAGACCCTCATGTAGATAGGC
                      ____________________________________________________________
consensus GTTACTGGATTTCACATCCCTATGCACTACTTTTGGTTCAAGACCCTCATGTAGATAGGC
 
. : . : . : . : . : . :
JMFN044L03+ CAAACCTTTTGCACATCCCAATATTACATTCATACGGATATCCCACGTCAAAGGACTGAC
JMFF047M02+ CAAACCTTTTGCACATCCCAATATTACATTCATACGGATATCCCACGTCAAAGGACTGAC
                      ____________________________________________________________
consensus CAAACCTTTTGCACATCCCAATATTACATTCATACGGATATCCCACGTCAAAGGACTGAC
 
. : . : . : . : . : . :
JMFN044L03+ TTCCCCTACATCTCCATGAAGCCACTGGTCCAAATTCCCATTGTTTACATACTCATACAC
JMFF047M02+ TTCCCCTACATCTCCATGAAGCCACTGGTCCAAATTCCCATTGTTTACATACTCATACAC
                      ____________________________________________________________
consensus TTCCCCTACATCTCCATGAAGCCACTGGTCCAAATTCCCATTGTTTACATACTCATACAC
 
. : . : . : . : . : . :
JMFN044L03+ AAGCATCCT
JMFF047M02+ AAGCATCCTGTAAGCTCCTTCAACGCAGTAGCCAAGAAGCCTTACAAGATTTTTGTGTCT
JMSF006A08+ GTAGCCAAGAAGCCTTACAAGATTTTTGTGTCT
                      ____________________________________________________________
consensus AAGCATCCTGTAAGCTCCTTCAACGCAGTAGCCAAGAAGCCTTACAAGATTTTTGTGTCT
 
. : . : . : . : . : . :
JMFF047M02+ TACACGCCCAATAGCTTCCACCT
JMSF006A08+ TACACGCCCAATAGCTTCCACCTCTACCTTAAATTCTCTCTCAGCTTGGCCTCTGTTATT
                      ____________________________________________________________
consensus TACACGCCCAATAGCTTCCACCTCTACCTTAAATTCTCTCTCAGCTTGGCCTCTGTTATT
 
. : . : . : . : . : . :
JMSF006A08+ CAATAGATTTTTCACAGCTACTCTGGTACCATCAGCCAAGGCACCCCGATAAACAATCCC
                      ____________________________________________________________
consensus CAATAGATTTTTCACAGCTACTCTGGTACCATCAGCCAAGGCACCCCGATAAACAATCCC