Contig 003543:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001O09Sequence474003047 (3)emb|CDP08772.1|2e-10unnamed protein product [Coffea canephora]737003543 (6)ref|XP_009767889.1|5e-106PREDICTED: probable serine/threonine-protein kinase At1g01540 [Nicotiana sylves
JMFF040J21Sequence476003047 (3)emb|CDP08772.1|3e-11unnamed protein product [Coffea canephora]722003543 (6)ref|XP_009767889.1|1e-95PREDICTED: probable serine/threonine-protein kinase At1g01540 [Nicotiana sylves
JMFF047M02Sequence417003543 (6)ref|XP_011093121.1|2e-78PREDICTED: probable serine/threonine-protein kinase At1g01540 [Sesamum indicum]396003543 (6)ref|XP_009597781.1|6e-08PREDICTED: probable serine/threonine-protein kinase At1g01540 isoform X1 [Nicot
JMFN044L03Sequence632003543 (6)gb|KDP28584.1|1e-136hypothetical protein JCGZ_14355 [Jatropha curcas]
JMSF006A08Sequence250003543 (6)ref|XP_010059914.1|4e-23PREDICTED: probable serine/threonine-protein kinase At1g01540 [Eucalyptus grand

Alignment

This contig is upended


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rJMFF047M02-                      CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAGCCAAA
                      ____________________________________________________________
consensus                         CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAGCCAAA
 
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rJMFF047M02-          TCCAATGAATCACTGTTATAAGAATATCAAATTATGGAGTAATATTATGAGATGTACAAC
rJMFF040J21-                      CTGTTATAAGAATATCAAATTATGGAGTAATATTATGAGATGTACAAC
rJMFF001O09-                                                  AATATTATGAGATGTACAAC
                      ____________________________________________________________
consensus             TCCAATGAATCACTGTTATAAGAATATCAAATTATGGAGTAATATTATGAGATGTACAAC
 
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rJMFF047M02-          TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
rJMFF040J21-          TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
rJMFF001O09-          TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
                      ____________________________________________________________
consensus             TGCAATTAATGCTGTGAACAAACAAGCCATAAATATAGCCAAAAATAGTAAAACCGGGGG
 
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rJMFF047M02-          CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
rJMFF040J21-          CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
rJMFF001O09-          CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
                      ____________________________________________________________
consensus             CGTGATCAACTACAGTGCTATCAGGTGGGTGGAGGGCAAAAAGACTTCAATAGGCATAAA
 
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rJMFF047M02-          CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
rJMFF040J21-          CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
rJMFF001O09-          CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
                      ____________________________________________________________
consensus             CAAATTGCAAAACGCTTTGGATCGTGCATATGATATTATCTCTTGTAATGTTATCTCCAT
 
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rJMFF047M02-          CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
rJMFF040J21-          CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
rJMFF001O09-          CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
                      ____________________________________________________________
consensus             CTAGTTGGTGGGTTATGGCTCCTACTACTGTCGCCTTCACTGGTATCAGAAGCCCCATCA
 
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rJMFF047M02-          CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTG            
rJMFF040J21-          CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTGTGATCACGGTGT
rJMFF001O09-          CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTGTGATCACGGTGT
                      ____________________________________________________________
consensus             CCATACCGTTTTTTGCCTATATTTGGACCAGCGTTACCATCTTCCTTGTGATCACGGTGT
 
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rJMFF040J21-          GAACTGGACGATTCTCTTCCAACCCTCCGTTCATCACGAAATAATACATCATCTGCCTCG
rJMFF001O09-          GAACTGGACGATTCTCTTCCAATCCTCCGTTCATCACGAAATAATACATCATCTGCCTCG
JMFN044L03+                                                 AAATAATACATCATCTGCCTCG
                      ____________________________________________________________
consensus             GAACTGGACGATTCTCTTCCAATCCTCCGTTCATCACGAAATAATACATCATCTGCCTCG
 
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rJMFF040J21-          AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
rJMFF001O09-          AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
JMFN044L03+           AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
                      ____________________________________________________________
consensus             AGCATATGGATAATATGTCCCATTTTGGGTCTCTTCTGAGCATCAGGGTCGACACAGCGA
 
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rJMFF040J21-          AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
rJMFF001O09-          AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
JMFN044L03+           AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
                      ____________________________________________________________
consensus             AGAGCAACCAAAAGAACACGCTTCAGTGCTTTTGAAGAAGGCACTTCAGGTAGCTTAGGA
 
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rJMFF040J21-          TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
rJMFF001O09-          TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
JMFN044L03+           TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
                      ____________________________________________________________
consensus             TCTATCACTTCCTCTGATTTTCTATTTCCAACCATAGTCTTCAACCAGTCCACCAAGTGA
 
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rJMFF040J21-          ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATGATA
rJMFF001O09-          ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATTATA
JMFN044L03+           ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATGATA
                      ____________________________________________________________
consensus             ACCTCTCCTTGTGGCCGGCCATAATCAACAGGGGTTCTCCCAGTAATTATCTCCATGATA
 
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rJMFF040J21-          AGTATTCCAAAGCTATAAATATCACTTTTTTCGTTCAGCATACCAGTGCAAGCATATTCC
rJMFF001O09-          AGTATTCCAAAGCTATAAATATCACTTTTTTCATTCAGCATACCAGTGCAAGCATATTCC
JMFN044L03+           AGTATTCCAAAGCTATAAATATCACTTTTTTCATTCAGCATACCAGTGCAAGCATATTCC
JMFF047M02+                                     TTTTTCATTCAGCATACCAGTGCAAGCATATCCC
                      ____________________________________________________________
consensus             AGTATTCCAAAGCTATAAATATCACTTTTTTCATTCAGCATACCAGTGCAAGCATATTCC
 
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rJMFF040J21-          -GGGGCAACATATCC                                             
rJMFF001O09-          -GGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCA  
JMFN044L03+           -GGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCATT
JMFF047M02+           GGGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCATT
                      ____________________________________________________________
consensus             -GGGGCAACATATCCAAATGTTCCCATCACACGAGTTGTCACATAACTACTCTCTGCATT
 
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JMFN044L03+           CAAGAGCTTAGCAAGCCCAAAGTCAGACAACTTCGTATGCCATTGCCGATCAAGGAGTAT
JMFF047M02+           CAAGAGCTTAGCAAGCNCAAAGTCAGACAACTTCGTATGCCATTGCCGATCAAGGAGTAT
                      ____________________________________________________________
consensus             CAAGAGCTTAGCAAGCCCAAAGTCAGACAACTTCGTATGCCATTGCCGATCAAGGAGTAT
 
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JMFN044L03+           GTTACTGGATTTCACATCCCTATGCACTACTTTTGGTTCAAGACCCTCATGTAGATAGGC
JMFF047M02+           GTTACTGGATTTCACATCCCTATGCACTACTTTTGGTTCAAGACCCTCATGTAGATAGGC
                      ____________________________________________________________
consensus             GTTACTGGATTTCACATCCCTATGCACTACTTTTGGTTCAAGACCCTCATGTAGATAGGC
 
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JMFN044L03+           CAAACCTTTTGCACATCCCAATATTACATTCATACGGATATCCCACGTCAAAGGACTGAC
JMFF047M02+           CAAACCTTTTGCACATCCCAATATTACATTCATACGGATATCCCACGTCAAAGGACTGAC
                      ____________________________________________________________
consensus             CAAACCTTTTGCACATCCCAATATTACATTCATACGGATATCCCACGTCAAAGGACTGAC
 
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JMFN044L03+           TTCCCCTACATCTCCATGAAGCCACTGGTCCAAATTCCCATTGTTTACATACTCATACAC
JMFF047M02+           TTCCCCTACATCTCCATGAAGCCACTGGTCCAAATTCCCATTGTTTACATACTCATACAC
                      ____________________________________________________________
consensus             TTCCCCTACATCTCCATGAAGCCACTGGTCCAAATTCCCATTGTTTACATACTCATACAC
 
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JMFN044L03+           AAGCATCCT                                                   
JMFF047M02+           AAGCATCCTGTAAGCTCCTTCAACGCAGTAGCCAAGAAGCCTTACAAGATTTTTGTGTCT
JMSF006A08+                                      GTAGCCAAGAAGCCTTACAAGATTTTTGTGTCT
                      ____________________________________________________________
consensus             AAGCATCCTGTAAGCTCCTTCAACGCAGTAGCCAAGAAGCCTTACAAGATTTTTGTGTCT
 
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JMFF047M02+           TACACGCCCAATAGCTTCCACCT                                     
JMSF006A08+           TACACGCCCAATAGCTTCCACCTCTACCTTAAATTCTCTCTCAGCTTGGCCTCTGTTATT
                      ____________________________________________________________
consensus             TACACGCCCAATAGCTTCCACCTCTACCTTAAATTCTCTCTCAGCTTGGCCTCTGTTATT
 
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JMSF006A08+           CAATAGATTTTTCACAGCTACTCTGGTACCATCAGCCAAGGCACCCCGATAAACAATCCC
                      ____________________________________________________________
consensus             CAATAGATTTTTCACAGCTACTCTGGTACCATCAGCCAAGGCACCCCGATAAACAATCCC