Contig 003537:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046H07Sequence579003537 (6)ref|XP_006351074.1|2e-31PREDICTED: potassium transporter 4-like [Solanum tuberosum]
JMFS002A02Sequence592003537 (6)ref|XP_006351074.1|3e-49PREDICTED: potassium transporter 4-like [Solanum tuberosum]
JMFS016C10Sequence627003537 (6)ref|XP_009626757.1|1e-56PREDICTED: potassium transporter 4-like [Nicotiana tomentosiformis]
JMFS065B07Sequence642003537 (6)ref|XP_009626757.1|3e-53PREDICTED: potassium transporter 4-like [Nicotiana tomentosiformis]
JMFS151E04Sequence611003537 (6)ref|XP_009626757.1|5e-52PREDICTED: potassium transporter 4-like [Nicotiana tomentosiformis]
JMSF005J15Sequence367003537 (6)ref|XP_006351074.1|4e-16PREDICTED: potassium transporter 4-like [Solanum tuberosum]156018117

Alignment

This contig is upended


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JMFS016C10+                                                 TGCAGAATGCCCAGTGGAGCCA
                      ____________________________________________________________
consensus                                                   TGCAGAATGCCCAGTGGAGCCA
 
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JMFS016C10+           TATTTGTAAGCAGATAGTTCCTCATCAGCAGCTTGTTGATTGGGAAGGAGACTAAACTTT
JMFS151E04+                      AGATAGTTCCTCATCAGCAGCTTGTTGATTGGGAAGGAGACTAAACTTT
JMFS002A02+                      AGATAGTTCCTCATCAGCAGCTTGTTGATTGGGAAGGAGACTAAACTTT
JMFS065B07+              TTGTAAGCAGATAGTTCCTCATCAGCAGCTTGTTGATTGGGAAGGAGACTAAACTTT
                      ____________________________________________________________
consensus             TATTTGTAAGCAGATAGTTCCTCATCAGCAGCTTGTTGATTGGGAAGGAGACTAAACTTT
 
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JMFS016C10+           GCATGTCTACAGAGCAGAGAGTATAAAGCAAAGCTGCCACCTTCCCCATTGTCATCTGCA
JMFS151E04+           GCATGTCTACAGAGCAGAGAGTATAAAGCAAAGCTGCCACCTTCCCCATTGTCATCTGCA
JMFS002A02+           GCATGTCTACAGAGCAGAGAGTATAAAGCAAAGCTGCCACCTTCCCCATTGTCATCTGCA
JMFS065B07+           GCATGTCTACAGAGCAGAGAGTATAAAGCAAAGCTGCCACCTTCCCCATTGTCATCTGCA
JMFF046H07+                                              GCCACTTTCCCCATTGTCATCTGCA
                      ____________________________________________________________
consensus             GCATGTCTACAGAGCAGAGAGTATAAAGCAAAGCTGCCACCTTCCCCATTGTCATCTGCA
 
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JMFS016C10+           CTCAGCACCACAACTACATACTTGAGCAAAGGCAGCAATGTTATTGTCCAAAAGACCAAT
JMFS151E04+           CTCAGCACCACAACTACATACTTGAGCAAAGGCAGCAATGTTATTGTCCAAAAGACCAAT
JMFS002A02+           CTCAGCACCACAACTACATACTTGAGCAAAGGCAGCAATGTTATTGTCCAAAAGACCAAT
JMFS065B07+           CTCAGCACCACAACTACATACTTGAGCAAAGGCAGCAATGTTATTGTCCAAAAGACCAAT
JMFF046H07+           CTCAGCACCACAACTACATACTTGAGCAAAGGCAGCAATGTTATTGTCCAAAAGACCAAT
                      ____________________________________________________________
consensus             CTCAGCACCACAACTACATACTTGAGCAAAGGCAGCAATGTTATTGTCCAAAAGACCAAT
 
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JMFS016C10+           GAGAAGGCACCAAATATTACATCCGGTGTTTGATGCTTCTGCAACTTGTCCACAAATATA
JMFS151E04+           GAGAAGGCACCAAATATTACATCCGGTGTTTGATGCTTCTGCAACTTGTCCACAAATATA
JMFS002A02+           GAGAAGGCACCAAATATTACATCCGGTGTTTGATGCTTCTGCAACTTGTCCACAAATATA
JMFS065B07+           GAGAAGGCACCAAATATTACATCCGGTGTTTGATGCTTCTGCAACTTGTCCACAAATATA
JMFF046H07+           GAGAAGGCACCAAATATTACATCCGGTGTTTGATGCTTCTGCAACTTGTCCACAAATATA
                      ____________________________________________________________
consensus             GAGAAGGCACCAAATATTACATCCGGTGTTTGATGCTTCTGCAACTTGTCCACAAATATA
 
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JMFS016C10+           CTTTTATAGACATAAAGAGGTGATGTGCTCAAATCCCCGTATACGACCCCAAAACTCTGG
JMFS151E04+           CTTTTATAGACATAAAGAGGTGATGTGCTCAAATCCCCGTATACGACCCCAAAACTCTGG
JMFS002A02+           CTTTTATAGACATAAAGAGGTGATGTGCTCAAATCCCCGTATACGACCCCAAAACTCTGG
JMFS065B07+           CTTTTATAGACATAAAGAGGTGATGTGCTCAAATCCCCGTATACGACCCCAAAACTCTGG
JMFF046H07+           CTTTTATAGACATAAAGAGGTGATGTGCTCAAATCCCCGTATACGACCCCAAAACTCTGG
                      ____________________________________________________________
consensus             CTTTTATAGACATAAAGAGGTGATGTGCTCAAATCCCCGTATACGACCCCAAAACTCTGG
 
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JMFS016C10+           TAAGCCAACAGCAGATCCCGGGTAATATTTACCAAAGAAAACTTTGATTG-TTTTTTTCT
JMFS151E04+           TACGCCAACAGCAGATCCCGGGTAATATTTACCAAAGAAAACTTTGATTG-TTTTTTTCT
JMFS002A02+           TACGCCAACAGCAGATCCCGGGTAATATTTACCAAAGAAAACTTTGATTGTTTTTTTTCT
JMFS065B07+           TACGCCAACAGCAGATCCCGGGTAATATTTACCAAAGAAAACTTTGATTG-TTTTTTTCT
JMFF046H07+           TACGCCAACAGCAGATCCCGGGTAATATTTACCAAAGAAAACTTTGATTG-TTTTTTTCT
                      ____________________________________________________________
consensus             TACGCCAACAGCAGATCCCGGGTAATATTTACCAAAGAAAACTTTGATTG-TTTTTTTCT
 
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JMFS016C10+           ATTAACTGCACTGCCTTCTCGTCCACCTACATGGGATGAAACCTCACTCGCACTTGCTGC
JMFS151E04+           ATTAACTGCACTGCCTTCTCGTCCACCTACATGGGATGAAACCTCACTCGCACTTGCTGC
JMFS002A02+           ATTAACTGCACTGCCTTCTCGTCCACCTACATGGGATGAAACCTCACTCGCACTTGCTGC
JMFS065B07+           ATTAACTGCACTGCCTTCTCGTCCACCTACATGGGATGAAACCTCACTCGCACTTGCTGC
JMFF046H07+           ATTAACTGCACTGCCTTCTCGTCCACCTACATGGGATGAAACCTCACTCGCACTTGCTGC
                      ____________________________________________________________
consensus             ATTAACTGCACTGCCTTCTCGTCCACCTACATGGGATGAAACCTCACTCGCACTTGCTGC
 
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JMFS016C10+           AAGTGGAGGAGGCAGTTCTGCACCATCTTCTTGACGATTAATGTCAACTTGATACATCTT
JMFS151E04+           AAGTGGAGGAGGCAGTTCTGCACCATCTTCTTGACGATTAATGTCAACTTGATACATCTT
JMFS002A02+           AAGTGGAGGAGGCAGTTCTGCACCATCTTCTTGACGATTAATGTCAACTTGATACATCTT
JMFS065B07+           AAGTGGAGGAGGCAGTTCTGCACCATCTTCTTGACGATTAATGTCAACTTGATACATCTT
JMFF046H07+           AAGTGGAGGAGGCAGTTCCGCACCATCTTCTTGACGATTAATGTCAACTTGATACATCTT
JMSF005J15+                                              GATTAATGTCAACTTGATACATCTT
                      ____________________________________________________________
consensus             AAGTGGAGGAGGCAGTTCTGCACCATCTTCTTGACGATTAATGTCAACTTGATACATCTT
 
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JMFS016C10+           TACACTTTTTTAGCAAGGAATAAGCGGCAATGGAAGACGAATTGGGCGGCGGCAGAGGGG
JMFS151E04+           TACACTTTTTTAGCAAGGAATAAGCGGCAATGGAAGACGAATTGGGCGGCGGCAGAGGGG
JMFS002A02+           TACACTTTTTTAGCAAGGAATAAGCGGCAATGGAAGACGAATTGGGCGGCGGCAGAGGGG
JMFS065B07+           TACACTTTTTTAGCAAGGAATAAGCGGCAATGGAAGACGAATTGGGCGGCGGCAGAGGGG
JMFF046H07+           TACACTTTTTTAGCAAGGAATAAGCGGCAATGGAAGACGAATTGGGCGGCGGCAGAGGGG
JMSF005J15+           TACACTTTTTTAGCAAGGAATAAGCGGCAATGGAAGACGAATTGGGCGGCGGCAGAGGGG
                      ____________________________________________________________
consensus             TACACTTTTTTAGCAAGGAATAAGCGGCAATGGAAGACGAATTGGGCGGCGGCAGAGGGG
 
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JMFS016C10+           CGGCGCGTTGAAGCGGGTGGTGGCGAGTGTAATTAGCCAACGCTCAGGCATCGCAGCTTC
JMFS151E04+           CGGCGCGTTGAAGCGGGTGGTGGCGAGTGTAATTAGCCAACGCTCAGGCATCGCAGCTTC
JMFS002A02+           CGGCGCGTTGAAGCGGGTGGTGGCGAGTGTAATTAGCCAACGCTCAGGCATCGCAGCTTC
JMFS065B07+           CGGCGCGTTGAAGCGGGTGGTGGCGAGTGTAATTAGCCAACGCTCAGGCATCGCAGCTTC
JMFF046H07+           CGGCGCGTTGAAGCGGGTGGTGGCGAGTGTAATTAGCCAACGCTCAGGCATCGCAGCTTC
JMSF005J15+           CGGCGCGTTGAAGCGGGTGGTGGCGAGTGTAATTAGCCAACGCTCAGGCATCGCAGCTTC
                      ____________________________________________________________
consensus             CGGCGCGTTGAAGCGGGTGGTGGCGAGTGTAATTAGCCAACGCTCAGGCATCGCAGCTTC
 
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JMFS016C10+           CTCATC                                                      
JMFS151E04+           CTCATCTATGTGTGATCTGGC                                       
JMFS002A02+           CTC                                                         
JMFS065B07+           CTCATCTATGTGTGATCTGGCGACTAGCG                               
JMFF046H07+           CTCATCTATGTGTGATCTGGCGACTAGCGGGTGGGTGTATAGTTGTATACTGTAA     
JMSF005J15+           CTCATCTATGTGTGATCTGGCGACTAGCGGGTGGGTGTATAGTTGTATACTGTAATACTG
                      ____________________________________________________________
consensus             CTCATCTATGTGTGATCTGGCGACTAGCGGGTGGGTGTATAGTTGTATACTGTAATACTG