Contig 003534:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005B20Sequence309003534 (2)gb|KCW72593.1|4e-37hypothetical protein EUGRSUZ_E01063, partial [Eucalyptus grandis]298011367 (2)gb|KEH37013.1|6e-20regulatory protein NPR1 [Medicago truncatula]
JMSF018F13Sequence565003534 (2)ref|XP_009778935.1|2e-78PREDICTED: alcohol dehydrogenase-like 4 [Nicotiana sylvestris]800001332 (2)gb|EYU35623.1|5e-95hypothetical protein MIMGU_mgv1a010961mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF018F13+ GAGGCAAGCAGAATCCAGGACAGTGTATT
                      ____________________________________________________________
consensus GAGGCAAGCAGAATCCAGGACAGTGTATT
 
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JMSF018F13+ CGGAGAAAGTGGAAGTGTTGAGGAAATGGTAGATTGGGTTCCCATCTTTGCTGGAAAACC
                      ____________________________________________________________
consensus CGGAGAAAGTGGAAGTGTTGAGGAAATGGTAGATTGGGTTCCCATCTTTGCTGGAAAACC
 
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JMSF018F13+ TGCACTTCCCGTCCCCCGCCATCACGCTTTTGAACGGATTCACTCTGAACTTCTTGCACA
                      ____________________________________________________________
consensus TGCACTTCCCGTCCCCCGCCATCACGCTTTTGAACGGATTCACTCTGAACTTCTTGCACA
 
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JMSF018F13+ GATTGGTCTTGCTGGATTTGCAGTAGGCGCAGTCGCCGCATTCCCCGTTGAATATCGCCA
                      ____________________________________________________________
consensus GATTGGTCTTGCTGGATTTGCAGTAGGCGCAGTCGCCGCATTCCCCGTTGAATATCGCCA
 
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JMSF018F13+ CCACCACGTCTCCGGCCTCCATTTCCGTCACGCCTTCTCCCACGCTTTCAACCACTCCAG
JMSF005B20+ CCACTCCAG
                      ____________________________________________________________
consensus CCACCACGTCTCCGGCCTCCATTTCCGTCACGCCTTCTCCCACGCTTTCAACCACTCCAG
 
. : . : . : . : . : . :
JMSF018F13+ AGGCTTCATGCCCAAGAATTCGAGGGAAAACACGTTGAGCTTGGTTCTCCCCTTTCCAAG
JMSF005B20+ AGGCTTCATGCCCAAGAATTCGAGGGAAAACACGTTGAGCTTGGTTCTCCCCTTTCCAAG
                      ____________________________________________________________
consensus AGGCTTCATGCCCAAGAATTCGAGGGAAAACACGTTGAGCTTGGTTCTCCCCTTTCCAAG
 
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JMSF018F13+ CACTGAGATCTGTGTGACATATTGAAGTGAAGAGGATCTTGATTCGAACCTCCAGCTTCT
JMSF005B20+ CACTGAGATCTGTGTGACATATTGAAGTGAAGAGGATCTTGATTCGAACCTCCAGCTTCT
                      ____________________________________________________________
consensus CACTGAGATCTGTGTGACATATTGAAGTGAAGAGGATCTTGATTCGAACCTCCAGCTTCT
 
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JMSF018F13+ GAGGCGGATCCACCAGCACATCCTCGATGATCAAGGGCTGGCCAGGACTGTACGCCACAG
JMSF005B20+ GAGGCGGATCCACCAGCACATCCTCGATGATCAAGGGCTGGCCAGGACTGTACGCCACAG
                      ____________________________________________________________
consensus GAGGCGGATCCACCAGCACATCCTCGATGATCAAGGGCTGGCCAGGACTGTACGCCACAG
 
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JMSF018F13+ CAGCTTTGCAGGTAATGACCTTGCCAGCAGTGTCAGCCGGAATGGAGAAGCCATGAACAG
JMSF005B20+ CAGCTTTGCAGGTAATGACCTTGCCAGCAGTGTCAGCCGGAATGGAGAAGCCATGAACAG
                      ____________________________________________________________
consensus CAGCTTTGCAGGTAATGACCTTGCCAGCAGTGTCAGCCGGAATGGAGAAGCCATGAACAG
 
. : . : . : . : . : . :
JMSF018F13+ AGTGGTTATCCAGAGAACCCATCGCGGTTAACTAGCTGTAGTATATATGTTAT
JMSF005B20+ AGTGGTTATCCAGAGAACCCATCGCGGTTAACTAGCTGTAGTATATATGTTATGTGAGTC
                      ____________________________________________________________
consensus AGTGGTTATCCAGAGAACCCATCGCGGTTAACTAGCTGTAGTATATATGTTATGTGAGTC