Contig 003534:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005B20Sequence309003534 (2)gb|KCW72593.1|4e-37hypothetical protein EUGRSUZ_E01063, partial [Eucalyptus grandis]298011367 (2)gb|KEH37013.1|6e-20regulatory protein NPR1 [Medicago truncatula]
JMSF018F13Sequence565003534 (2)ref|XP_009778935.1|2e-78PREDICTED: alcohol dehydrogenase-like 4 [Nicotiana sylvestris]800001332 (2)gb|EYU35623.1|5e-95hypothetical protein MIMGU_mgv1a010961mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF018F13+                                          GAGGCAAGCAGAATCCAGGACAGTGTATT
                      ____________________________________________________________
consensus                                            GAGGCAAGCAGAATCCAGGACAGTGTATT
 
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JMSF018F13+           CGGAGAAAGTGGAAGTGTTGAGGAAATGGTAGATTGGGTTCCCATCTTTGCTGGAAAACC
                      ____________________________________________________________
consensus             CGGAGAAAGTGGAAGTGTTGAGGAAATGGTAGATTGGGTTCCCATCTTTGCTGGAAAACC
 
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JMSF018F13+           TGCACTTCCCGTCCCCCGCCATCACGCTTTTGAACGGATTCACTCTGAACTTCTTGCACA
                      ____________________________________________________________
consensus             TGCACTTCCCGTCCCCCGCCATCACGCTTTTGAACGGATTCACTCTGAACTTCTTGCACA
 
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JMSF018F13+           GATTGGTCTTGCTGGATTTGCAGTAGGCGCAGTCGCCGCATTCCCCGTTGAATATCGCCA
                      ____________________________________________________________
consensus             GATTGGTCTTGCTGGATTTGCAGTAGGCGCAGTCGCCGCATTCCCCGTTGAATATCGCCA
 
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JMSF018F13+           CCACCACGTCTCCGGCCTCCATTTCCGTCACGCCTTCTCCCACGCTTTCAACCACTCCAG
JMSF005B20+                                                              CCACTCCAG
                      ____________________________________________________________
consensus             CCACCACGTCTCCGGCCTCCATTTCCGTCACGCCTTCTCCCACGCTTTCAACCACTCCAG
 
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JMSF018F13+           AGGCTTCATGCCCAAGAATTCGAGGGAAAACACGTTGAGCTTGGTTCTCCCCTTTCCAAG
JMSF005B20+           AGGCTTCATGCCCAAGAATTCGAGGGAAAACACGTTGAGCTTGGTTCTCCCCTTTCCAAG
                      ____________________________________________________________
consensus             AGGCTTCATGCCCAAGAATTCGAGGGAAAACACGTTGAGCTTGGTTCTCCCCTTTCCAAG
 
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JMSF018F13+           CACTGAGATCTGTGTGACATATTGAAGTGAAGAGGATCTTGATTCGAACCTCCAGCTTCT
JMSF005B20+           CACTGAGATCTGTGTGACATATTGAAGTGAAGAGGATCTTGATTCGAACCTCCAGCTTCT
                      ____________________________________________________________
consensus             CACTGAGATCTGTGTGACATATTGAAGTGAAGAGGATCTTGATTCGAACCTCCAGCTTCT
 
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JMSF018F13+           GAGGCGGATCCACCAGCACATCCTCGATGATCAAGGGCTGGCCAGGACTGTACGCCACAG
JMSF005B20+           GAGGCGGATCCACCAGCACATCCTCGATGATCAAGGGCTGGCCAGGACTGTACGCCACAG
                      ____________________________________________________________
consensus             GAGGCGGATCCACCAGCACATCCTCGATGATCAAGGGCTGGCCAGGACTGTACGCCACAG
 
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JMSF018F13+           CAGCTTTGCAGGTAATGACCTTGCCAGCAGTGTCAGCCGGAATGGAGAAGCCATGAACAG
JMSF005B20+           CAGCTTTGCAGGTAATGACCTTGCCAGCAGTGTCAGCCGGAATGGAGAAGCCATGAACAG
                      ____________________________________________________________
consensus             CAGCTTTGCAGGTAATGACCTTGCCAGCAGTGTCAGCCGGAATGGAGAAGCCATGAACAG
 
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JMSF018F13+           AGTGGTTATCCAGAGAACCCATCGCGGTTAACTAGCTGTAGTATATATGTTAT       
JMSF005B20+           AGTGGTTATCCAGAGAACCCATCGCGGTTAACTAGCTGTAGTATATATGTTATGTGAGTC
                      ____________________________________________________________
consensus             AGTGGTTATCCAGAGAACCCATCGCGGTTAACTAGCTGTAGTATATATGTTATGTGAGTC