Contig 003532:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF004N12-                                GAAGTAGATAGAGGTATGTAGTAACCAGTTTACCTGGG
                      ____________________________________________________________
consensus                                   GAAGTAGATAGAGGTATGTAGTAACCAGTTTACCTGGG
 
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rJMSF004N12-          GAGTTAGTGGCTATTACNGTACTGCTAGCCGATTAGGAATTATGATTAAAGTTTTATTTT
                      ____________________________________________________________
consensus             GAGTTAGTGGCTATTACNGTACTGCTAGCCGATTAGGAATTATGATTAAAGTTTTATTTT
 
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rJMSF004N12-          TTGAATGTTTTATATATATATATATATAATTGGATCGNGGCCCGTATCGGGGATGAGGAA
JMSF050L12+                                   TATAATTGGATCGGGGCCCGTATCGGGGNTGAGGAA
                      ____________________________________________________________
consensus             TTGAATGTTTTATATATATATATATATAATTGGATCGGGGCCCGTATCGGGGATGAGGAA
 
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rJMSF004N12-          ATTCTCANCACCCCCNTTCCATAAACCTGGGATCGATTTTTCTATAATAAACAAAT    
JMSF050L12+           ATTNTCAGCNCCCCCNTTCCATAAACCTGGGATCGATTTTTCTATAATAAACAAATAAAT
                      ____________________________________________________________
consensus             ATTCTCAGCACCCCCNTTCCATAAACCTGGGATCGATTTTTCTATAATAAACAAATAAAT
 
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JMSF050L12+           NAACCCATATATNTCNCCCAAATACATACNAACCGTNTTAATCAAATATTTAAGTNTTAT
                      ____________________________________________________________
consensus             NAACCCATATATNTCNCCCAAATACATACNAACCGTNTTAATCAAATATTTAAGTNTTAT
 
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JMSF050L12+           ATTTCCCCTTACAAAATGTTTGAATTAATTTAAAAAAAAAATAAAAATTCAGTAATTTTG
JMSF004N12+                                          AAAAAAAAAATAAAAATTCAGTAATTTTG
                      ____________________________________________________________
consensus             ATTTCCCCTTACAAAATGTTTGAATTAATTTAAAAAAAAAATAAAAATTCAGTAATTTTG
 
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JMSF011H18+                                     TATATATTTAAACGGGGATTAAAGAGAGAAAATA
JMSF050L12+           TATATGAAAAAAAATAATAGTTAGAATATATATTTAAATGGGGAATGAAGAAAGAAAATA
JMSF004N12+           TATATGAAAAAAAATAATAGTTAGAATATATATTTAAATGGGGAATGAAGAAAGAAAATA
                      ____________________________________________________________
consensus             TATATGAAAAAAAATAATAGTTAGAATATATATTTAAATGGGGAATGAAGAAAGAAAATA
 
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JMSF011H18+           AAAGTGGAGATTACCGGATAGCAAAATGGTTGATTTCAAGAACCAATTTACACACAAGAA
JMSF050L12+           AAAGCGGAGATTAGCCTATAGCAAAATGGTTTATTTCAAGAACCAATTTACCCATACAAT
JMSF004N12+           AAAGCGGAGATTAGCCTATAGCAAAATGGTTTATTTCAAGAACCAATTTACCCATACAAT
                      ____________________________________________________________
consensus             AAAGCGGAGATTAGCCTATAGCAAAATGGTTTATTTCAAGAACCAATTTACCCATACAAT
 
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JMSF011H18+           AAAAAATATAGATAGAAAAGGG                                      
JMSF050L12+           AAAAAATATAAATAGAAAAGGGTGAGGTAAGCAAAAAAGCTGACCACGAGACTTTGAGCA
JMSF004N12+           AAAAAATATAAATAGAAAAGGGTGAGGTAAGCAAAAAAGCTGACCACGAGACTTTGAGCA
                      ____________________________________________________________
consensus             AAAAAATATAAATAGAAAAGGGTGAGGTAAGCAAAAAAGCTGACCACGAGACTTTGAGCA
 
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JMSF050L12+           AGAGAAAAGAGGGCGGAGAGCCGGAGGATCAGAGGGCGGAGATCTTGAGAAGCCGAGGGC
JMSF004N12+           AGAGAAAAGAGGGCGGAGAGCCGGAGGATCAGAGGGCGGAGATCTTGAGAAGCCGAGGGC
                      ____________________________________________________________
consensus             AGAGAAAAGAGGGCGGAGAGCCGGAGGATCAGAGGGCGGAGATCTTGAGAAGCCGAGGGC
 
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JMSF050L12+           GCGGAAAGTCGGAGAAGGAAGAAAAGAGAGAGATGGGAGAAGCCGGAGGATCAGAGG   
JMSF004N12+           GCGGAAAGTCGGAGAAGGAAGAAAAGAGAGAGATGGGAGAAGCCGGAGGATCAGAGGGCC
                      ____________________________________________________________
consensus             GCGGAAAGTCGGAGAAGGAAGAAAAGAGAGAGATGGGAGAAGCCGGAGGATCAGAGGGCC