Contig 003518:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006D18Sequence586003518 (3)ref|XP_009804749.1|1e-73PREDICTED: ureidoglycolate hydrolase [Nicotiana sylvestris]
JMSF003B16Sequence266003518 (3)emb|CDO99172.1|2e-05unnamed protein product [Coffea canephora]635009881 (2)gb|EYU32522.1|1e-81hypothetical protein MIMGU_mgv1a005924mg [Erythranthe guttata]
JMSF019J15Sequence546003518 (3)ref|XP_009629653.1|2e-71PREDICTED: ureidoglycolate hydrolase [Nicotiana tomentosiformis]753009881 (2)ref|XP_006420164.1|2e-117hypothetical protein CICLE_v10004873mg [Citrus clementina] gb|ESR33404.1| hypoth

Alignment

This contig is upended


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JMFN006D18+           GCAAGTTCCACACTCCCCGCCATTAAGCGGCTTCCCAAGCAGCTGATCCCAAACCTTGTA
                      ____________________________________________________________
consensus             GCAAGTTCCACACTCCCCGCCATTAAGCGGCTTCCCAAGCAGCTGATCCCAAACCTTGTA
 
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JMFN006D18+           GGCTCTTCTGAGGTGAACATGATTACTTCCAGTGACCTCTTAGGCTTGAAGCCAGATCTG
JMSF019J15+                                                             GCCAGATCTG
                      ____________________________________________________________
consensus             GGCTCTTCTGAGGTGAACATGATTACTTCCAGTGACCTCTTAGGCTTGAAGCCAGATCTG
 
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JMFN006D18+           TTCAATACATTAATTGCCTCGATTGCACCCAAA--ACCAATCACGCCATCATATTTCCCC
JMSF019J15+           TTCAATACATTAATTGCCTCGATTGCACCCAAAACACCAATCACGCCATCATATTTCCCC
                      ____________________________________________________________
consensus             TTCAATACATTAATTGCCTCGATTGCACCCAAAACACCAATCACGCCATCATATTTCCCC
 
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JMFN006D18+           GAGAATGGTATGGCATCAATGTGTGAGCCCGTTGCAACTGGGGCTAGCTCAGGTTCATAG
JMSF019J15+           GAGAATGGTATGGCATCAATGTGTGAGCCCGTTGCAACTGGGGCTAGCTCAGGTTCATAG
                      ____________________________________________________________
consensus             GAGAATGGTATGGCATCAATGTGTGAGCCCGTTGCAACTGGGGCTAGCTCAGGTTCATAG
 
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JMFN006D18+           CCATTCCACCGACCAAAAATGTTGCCTACTGCATCCTCACGTACAGAGAGACCAGAACGA
JMSF019J15+           CCATTCCACCGACCAAAAATGTTGCCTACTGCATCCTCACGTACAGAGAGACCAGAACGA
                      ____________________________________________________________
consensus             CCATTCCACCGACCAAAAATGTTGCCTACTGCATCCTCACGTACAGAGAGACCAGAACGA
 
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JMFN006D18+           CTCATCAAATCCTTTACATACCTCCTTGCCACTACATCCTTCTCACTGTACAACACCCTA
JMSF019J15+           CTCATCAAATCCTTTACATACCTCCTTGCCACTACATCCTTCTCACTGTACAACACCCTA
                      ____________________________________________________________
consensus             CTCATCAAATCCTTTACATACCTCCTTGCCACTACATCCTTCTCACTGTACAACACCCTA
 
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JMFN006D18+           GTTACTGAAGGTGCAGGTGAATCTGAGAAAGTTGATAGCTCATCAATCTGTTTTTGCAGA
JMSF019J15+           GTTACTGAAGGTGCAGGTGAATCTGAGAAAGTTGATAGCTCATCAATCTGTTTTTGCAGA
JMSF003B16+                                                              TTTTGCAGA
                      ____________________________________________________________
consensus             GTTACTGAAGGTGCAGGTGAATCTGAGAAAGTTGATAGCTCATCAATCTGTTTTTGCAGA
 
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JMFN006D18+           GAGAGAGTGTCCACCGATAAAGAAGAAACTGAATTTGGAAAGTGGGGCTCGTGAATTGGG
JMSF019J15+           GAGAGAGTGTCCACCGATAAAGAAGAAACTGAATTTGGAAAGTGGGGCTCGTGAATTGGG
JMSF003B16+           GAGAGAGTGTCCACCGATAAAGAAGAAACTGAATTTGGAAAGTGGGGCTCGTGAATTGGG
                      ____________________________________________________________
consensus             GAGAGAGTGTCCACCGATAAAGAAGAAACTGAATTTGGAAAGTGGGGCTCGTGAATTGGG
 
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JMFN006D18+           TACCCAGAGAACTCCTCCATGGTCTTGATGGTGGAATCTTGTTCATTGTTATAAGCTGAG
JMSF019J15+           TACCCAGAGAACTCCTCCATGGTCTTGATGGTGGAATCTTGTTCATTGTTATAAGCTGAG
JMSF003B16+           TACCCAGAGAACTCCTCCATGGTCTTGATGGTGGAATCTTGTTCATTGTTATAAGCTGAG
                      ____________________________________________________________
consensus             TACCCAGAGAACTCCTCCATGGTCTTGATGGTGGAATCTTGTTCATTGTTATAAGCTGAG
 
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JMFN006D18+           AGTCCACCCAGTGCAGCGATGGAGAAGAAGAAGATGAAGAGCAGAGAG            
JMSF019J15+           AGTCCACCCAGTGCAGCGATGGAGAAGAAGAAGATGAAGAGCAGAGAGAATCTCTGAGGA
JMSF003B16+           AGTCCACCCAGTGCAGCGATGGAGAAGAAGAAGATGAAGAGCAGAGAGAATCTCTGAGGA
                      ____________________________________________________________
consensus             AGTCCACCCAGTGCAGCGATGGAGAAGAAGAAGATGAAGAGCAGAGAGAATCTCTGAGGA
 
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JMSF019J15+           ATCTCCATGGCAAGCTCAGAGGATATCTGAATTGATTGGCACAGTCTTTGTGCTC     
JMSF003B16+           ATCTCCATGGCAAGCTCAGAGGATATCTGAATTGATTGGCACAGTCTTTGTGCTCAAGTC
                      ____________________________________________________________
consensus             ATCTCCATGGCAAGCTCAGAGGATATCTGAATTGATTGGCACAGTCTTTGTGCTCAAGTC