| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025E14 | Sequence | 497 | 003514 (6) | ref|XP_009761495.1| | 4e-42 | PREDICTED: B3 domain-containing protein At2g36080 [Nicotiana sylvestris] | 544 | 024357 | |||
| JMFF045L05 | Sequence | 653 | 003514 (6) | ref|XP_009761495.1| | 8e-59 | PREDICTED: B3 domain-containing protein At2g36080 [Nicotiana sylvestris] | 611 | 003514 (6) | emb|CBI30344.3| | 7e-45 | unnamed protein product [Vitis vinifera] |
| JMFN042D21 | Sequence | 611 | 003514 (6) | ref|XP_009761495.1| | 9e-59 | PREDICTED: B3 domain-containing protein At2g36080 [Nicotiana sylvestris] | |||||
| JMSF002J23 | Sequence | 268 | 003514 (6) | ref|XP_009588142.1| | 5e-05 | PREDICTED: B3 domain-containing protein At2g36080-like [Nicotiana tomentosiform | 706 | 003514 (6) | emb|CBI30344.3| | 2e-57 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF045L05- ACTTTCCCCTGTGGTCCATACTAGTCA
____________________________________________________________
consensus ACTTTCCCCTGTGGTCCATACTAGTCA
. : . : . : . : . : . :
rJMFF045L05- GTCCAGAATGTCACATCCACAGATCTTATCCCTGCTGATATCTCATCTGATTGACATCTC
rJMSF002J23- GCTGATATCTCATCTGATTGACATCTC
____________________________________________________________
consensus GTCCAGAATGTCACATCCACAGATCTTATCCCTGCTGATATCTCATCTGATTGACATCTC
. : . : . : . : . : . :
rJMFF045L05- TTGAGAAATTTTTTAAATCCTGCATGTGAGTGTAATGGTTGTTGTAGGAGGCAAGAGGGT
rJMSF002J23- TTGAGAAATTTTTTAAATCCTGCATGTGAGTGTAATGGTTGTTGTAGGAGGCAAGAGGGT
____________________________________________________________
consensus TTGAGAAATTTTTTAAATCCTGCATGTGAGTGTAATGGTTGTTGTAGGAGGCAAGAGGGT
. : . : . : . : . : . :
rJMFF045L05- TGGAATAATATTGGTATAAATAGTGATGGCCGGTCTGACCCTGGCTCGATGTGGTCGAAC
rJMSF002J23- TGGAATAATATTGGTATAAATAGTGATGGCCGGTCTGACCCTGGCTCGATGTGGTCGAAC
____________________________________________________________
consensus TGGAATAATATTGGTATAAATAGTGATGGCCGGTCTGACCCTGGCTCGATGTGGTCGAAC
. : . : . : . : . : . :
rJMFF045L05- CGTCTGGTGTTGCCGGTTCAGCCTCTTCCACCTCCGGTTGGCACTCCATGTTCACCCCAA
rJMSF002J23- CGTCTGGTGTTGCCGGTTCAGCCTCTTCCACCTCCGGTTGGCACTCCATGTTCACCCCAA
____________________________________________________________
consensus CGTCTGGTGTTGCCGGTTCAGCCTCTTCCACCTCCGGTTGGCACTCCATGTTCACCCCAA
. : . : . : . : . : . :
rJMFF045L05- ACAACCTTAGTGTCCTCGAACTCCCACTGGATGGTGTCTGGCTTTGCCCCATTGAACCTC
rJMSF002J23- ACAACCTTAGTGTCCTCGAACTCCCACTGGATGGTGTCTGGCTTTGCCCCATTGAACCTC
____________________________________________________________
consensus ACAACCTTAGTGTCCTCGAACTCCCACTGGATGGTGTCTGGCTTTGCCCCATTGAACCTC
. : . : . : . : . : . :
rJMFF045L05- CTGCATGAAGACAGTCGGGGGATTGGAATGGGAGACCCGCCGGAGGATAAGGGTAGTACA
rJMSF002J23- CTGCATGAAGACAGTCGGGGGATTGGAATGGGAGACCCGCCGGAGGATAAGGGTAGTACA
JMFN042D21+ CGGAGGATAAGGGTAGTACA
____________________________________________________________
consensus CTGCATGAAGACAGTCGGGGGATTGGAATGGGAGACCCGCCGGAGGATAAGGGTAGTACA
. : . : . : . : . : . :
rJMFF045L05- CTTGGCCCCATCCGCCGCCAACCACCGTGCCCGGCTGACCGACCGCTCCTCCTTCGTGAA
rJMSF002J23- CTTGGCCCCATCCGCCGCCAACCACCGTGCCCGGCTGACCGACCGCTCCTCCTTCGTGAA
JMFN042D21+ CTGGGCCCCATCCGCCGCCAACCACCGTGCCCGGCTGACCGACCGCTCCTCCTTCGTGAA
JMFF045L05+ CCCCATCCGCCGCCAACCACCGTGCCCGGCTGACCGACCGCTCCTCCTTCGTGAA
____________________________________________________________
consensus CTTGGCCCCATCCGCCGCCAACCACCGTGCCCGGCTGACCGACCGCTCCTCCTTCGTGAA
. : . : . : . : . : . :
rJMFF045L05- CTCCCGCGGCAGCCGCGGCGGCGCCAGCGCTTCTCCGCCTCCACCCTATAAAGAGGCGGT
rJMSF002J23- CTCCCGCGGCAGCCGCGGCGGCGCCAGCGCTTCTCCGCCTCCACCCTATAAAGAGGCGGT
JMFN042D21+ CTCCCGCGGCAGCCGCGGCGGCGCCAGCGCTTCTCCGCCTCCACCCTATAAAGAGGCGGT
JMFF045L05+ CTCCCGCGGCAGCCGCGGCGGCGCCAGCGCTTCTCCGCCTCCACCCTATAAAGAGGCGGT
____________________________________________________________
consensus CTCCCGCGGCAGCCGCGGCGGCGCCAGCGCTTCTCCGCCTCCACCCTATAAAGAGGCGGT
. : . : . : . : . : . :
rJMFF045L05- CGCCGTCCAGGCGGTGGCGCTGGAACAGCACCACGTCGCCGGCGTCCAGCCGCTTCTCCT
rJMSF002J23- CGCCGTCCAGGCGGTGGCGCTGGAACAGCACCACGTCGCCGGCGTCCAGCCGCTTCTCCT
JMFN042D21+ CGCCGTCCAGGCGGTGGCGCTGGAACAGCACCACGTCGCCGGCGTCCAGCCGCTTCTCCT
JMFF045L05+ CGCCGTCCAGGCGGTGGCGCTGGAACAGCACCACGTCGCCGGCGTCCAGCCGCTTCTCCT
JMFF025E14+ GCGTCCAGCCGCTTCTCCT
____________________________________________________________
consensus CGCCGTCCAGGCGGTGGCGCTGGAACAGCACCACGTCGCCGGCGTCCAGCCGCTTCTCCT
. : . : . : . : . : . :
rJMFF045L05- TCACGAACCGGCTCCACCCTTTCGTCAGCACGTAGCTCTGGCTA
rJMSF002J23- TCACGAACCGGCTCCACCCTTTCGTCAGCACGTAGCTCTGGCTACTGTTCCAATACGAAT
JMFN042D21+ TCACGAACCGGCTCCACCCTTTCGTCAGCACGTAGCTCTGGCTACTGTTCCAATACGAAT
JMFF045L05+ TCACGAACCGGCTCCACCCTTTCGTCAGCACGTAGCTCTGGCTACTGTTCCAATACGAAT
JMFF025E14+ TCACGAACCGGCTCCACCCTTTCGTCAGCACGTAGCTCTGGCTACTGTTCCAATACGAAT
____________________________________________________________
consensus TCACGAACCGGCTCCACCCTTTCGTCAGCACGTAGCTCTGGCTACTGTTCCAATACGAAT
. : . : . : . : . : . :
rJMSF002J23- ACCTGAACCGCCAGAGCTTGCCGGATTCATCCTCGAAGCTAAGCAGCAAACCTTTCTCGG
JMFN042D21+ ACCTGAACCGCCAGAGCTTGCCGGATTCATCCTCGAAGCTAAGCAGCAAACCTTTCTCGG
JMFF045L05+ ACCTGAACCGCCAGAGCTTGCCGGATTCATCCTCGAAGCTAAGCAGCAAACCTTTCTCGG
JMFF025E14+ ACCTGAACCGCCAGAGCTTGCCGGATTCATCCTCGAAGCTAAGCAGCAAACCTTTCTCGG
____________________________________________________________
consensus ACCTGAACCGCCAGAGCTTGCCGGATTCATCCTCGAAGCTAAGCAGCAAACCTTTCTCGG
. : . : . : . : . : . :
rJMSF002J23- CGCCGGCTGCGGCGGCGGANGAGTCCTGTCCGGTCAACGGGAAAGTACTTCTCGGCGTGT
JMFN042D21+ CGCCGGCTGCGGCGGCGGAGGAGTCCTGTCCGGTCAACGGG-AAGTACTTCTCGGCGTGT
JMFF045L05+ CGCCGGCTGCGGCGGCGGAGGAGTCCTGTCCGGTCAACGGG-AAGTACTTCTCGGCGTGT
JMFF025E14+ CGCCGGCTGCGGCGGCGGAGGAGTCCTGTCCGGTCAACGGG-AAGTACTTCTCGGCGTGT
____________________________________________________________
consensus CGCCGGCTGCGGCGGCGGAGGAGTCCTGTCCGGTCAACGGG-AAGTACTTCTCGGCGTGT
. : . : . : . : . : . :
rJMSF002J23- TGTT
JMFN042D21+ TGTTTGGGGATGACGAGGCGGTTGAGTTTTCCGACATCGCTGGGCGTCAATGGCTTCTCG
JMFF045L05+ TGTTTGGGGATGACGAGGCGGTTGAGTTTTCCGACATCGCTGGGCGTCAATGGCTTCTCG
JMFF025E14+ TGTTTGGGGATGACGAGGCGGTTGAGTTTTCCGACATCGCTGGGCGTCAATGGCTTCTCG
JMSF002J23+ GACATCGCTGGGCGTCAATGGCTTCTCG
____________________________________________________________
consensus TGTTTGGGGATGACGAGGCGGTTGAGTTTTCCGACATCGCTGGGCGTCAATGGCTTCTCG
. : . : . : . : . : . :
JMFN042D21+ AACAAGTGCTCTTTCGGCACCATTACCTGATCCCTCTCCTCGGTGAGCTGCTCCTCCGGC
JMFF045L05+ AACAAGTGCTCTTTCGGCACCATTACCTGATCCCTCTCCTCGGTGAGCTGCTCCTCCGGC
JMFF025E14+ AACAAGTGCTCTTTCGGCACCATTACCTGATCCCTCTCCTCGGTGAGCTGCTCCTCCGGC
JMSF002J23+ AACAAGTGCTCTTTCGGCACCATTACCTGATCCCTCTCCTCGGTGAGCTGCTCCTCCGGC
____________________________________________________________
consensus AACAAGTGCTCTTTCGGCACCATTACCTGATCCCTCTCCTCGGTGAGCTGCTCCTCCGGC
. : . : . : . : . : . :
JMFN042D21+ TCCTCGTCGTCGTTCAGGTCGAACCGGACGCCTTTCCTCGACGACTCGACGATATACTCC
JMFF045L05+ TCCTCGTCGTCGTTCAGGTCGAACCGGACGCCTTTCCTCGACGACTCGACGGAATACTCC
JMFF025E14+ TCCTCGTCGTCGTTCAGGTCGAACCGGACGCCTTTCCTCGACGCCTCGACGATATACTCC
JMSF002J23+ TCCTCGTCGTCGTTCAGGTCGAACCGGACGCCTTTCCTCGACGACTCGACGATATACTCC
____________________________________________________________
consensus TCCTCGTCGTCGTTCAGGTCGAACCGGACGCCTTTCCTCGACGACTCGACGATATACTCC
. : . : . : . : . : . :
JMFN042D21+ GGCTGTTTACTCCACCAGAATGGCTCCGCCGGCAGCTCCGATGAGGGATGGT
JMFF045L05+ GGCTGTTTACTCCACCAGAATGGCTCCGCCGGCAGCTCCGATGAGGGATGGTTCACAGAC
JMFF025E14+ GGCTGTTTACTCCACCAGAATGGCTCCGCCGGCAGCTCCGATGAGGGATGGTTCACAGAC
JMSF002J23+ GGCTGTTTACTCCACCAGAATGGCTCCGCCGGCAGCTCCGATGAGGGATGGTTCACAGAC
____________________________________________________________
consensus GGCTGTTTACTCCACCAGAATGGCTCCGCCGGCAGCTCCGATGAGGGATGGTTCACAGAC
. : . : . : . : . : . :
JMFF045L05+ ATCCCAGAAAGAGAGAGAGAGAGATGGGGGGATGGCAGTTGGAGTGAGAATAGTACGTT
JMFF025E14+ ATCCCAGAAAGAGAGAGAGAGAGATGGGGGGATGGCAGTTGGAGTGAGAATAGTACGTT
JMSF002J23+ ATCCCAGAAAGAGAGAGAGAGAGATGGGGGGATGGCAGTTGGAGTGAGAATAGTACGTTC
____________________________________________________________
consensus ATCCCAGAAAGAGAGAGAGAGAGATGGGGGGATGGCAGTTGGAGTGAGAATAGTACGTTC