Contig 003508:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C13Sequence614003508 (9)gb|EPS73081.1|3e-62hypothetical protein M569_01675, partial [Genlisea aurea]668002679 (3)ref|XP_009619283.1|1e-40PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMFF024F01Sequence456003508 (9)ref|XP_009609764.1|1e-37PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]728002679 (3)ref|XP_009619283.1|4e-59PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMFF043O04Sequence628003508 (9)gb|EYU26139.1|4e-63hypothetical protein MIMGU_mgv1a022719mg, partial [Erythranthe guttata]580002679 (3)ref|XP_009619283.1|2e-25PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMFS024D07Sequence616003508 (9)ref|XP_009609764.1|6e-38PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMFS091C03Sequence634003508 (9)ref|XP_009609764.1|4e-41PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMFS094H11Sequence627003508 (9)ref|XP_009609764.1|8e-41PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMFS108C07Sequence619003508 (9)ref|XP_009609764.1|3e-41PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMFS151C09Sequence641003508 (9)ref|XP_009609764.1|1e-40PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]
JMSF002A24Sequence288003508 (9)679022426ref|XP_009619283.1|4e-57PREDICTED: CSC1-like protein RXW8 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF043O04+                                                              GATGTATTT
                      ____________________________________________________________
consensus                                                                GATGTATTT
 
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JMFF043O04+           GTATTCAAAGTATAGGAGAATGCAAGTAGAGAATGAAATCACGTATAACGCTAGGCAATG
JMFF015C13+              TTCAAAGTATAGGAGAATGCAAGTAGAGAATGAAATCACGTATAACGNTAGGCAATG
                      ____________________________________________________________
consensus             GTATTCAAAGTATAGGAGAATGCAAGTAGAGAATGAAATCACGTATAACGCTAGGCAATG
 
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JMFF043O04+           AGCCCAAAGCCACTGAGACCCTTCCTTGACATTTTCAATGGTGAAAATCTCCAATGAGTC
JMFF015C13+           AGCCCAAAGCCACTGAGACCCTTCCTTGACATTTTCAATGGTGAAAATCTCCAATGAGTC
                      ____________________________________________________________
consensus             AGCCCAAAGCCACTGAGACCCTTCCTTGACATTTTCAATGGTGAAAATCTCCAATGAGTC
 
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JMFF043O04+           CTCAGGAGCCAGCTCGTGTGCTACATCCTGCCCGAAATAGTTGAGTGGCAGCACAAGGAA
JMFF024F01+                                                    TGAGTGGCAGCACAAGGAA
JMFF015C13+           CTCAGGAGCCAGCTCGTGTGCTACATCCTGCCCGAAATAGTTGAGTGGCAGCACAAGGAA
JMFS108C07+                                 ACATCCTGCCCGAAATAGTTGAGTGGCAGCACAAGGAA
JMFS094H11+                                    TCCTGCCCGAAATAGTTGAGTGGCAGCACAAGGAA
JMFS024D07+                                                TAGTTGAGTGGCAGCACAAGGAA
JMFS091C03+                                 ACATCCTGCCCGAAATAGTTGAGTGGCAGCACAAGGAA
JMFS151C09+                                        GCCCGAAATAGTTGAGTGGCAGCACAAGGAA
                      ____________________________________________________________
consensus             CTCAGGAGCCAGCTCGTGTGCTACATCCTGCCCGAAATAGTTGAGTGGCAGCACAAGGAA
 
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JMFF043O04+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
JMFF024F01+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
JMFF015C13+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
JMFS108C07+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
JMFS094H11+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
JMFS024D07+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
JMFS091C03+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
JMFS151C09+           AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
                      ____________________________________________________________
consensus             AAGGCAAATGGAAGCAGCAATGGAGAATATTCGGATACTGAAAACAATTGTACGATCAAA
 
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JMFF043O04+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
JMFF024F01+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
JMFF015C13+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
JMFS108C07+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
JMFS094H11+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
JMFS024D07+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
JMFS091C03+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
JMFS151C09+           GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
                      ____________________________________________________________
consensus             GACCAGAGCATCCAAGCCTCCAACAGCATTTATTTCTTCATCAGTTGTCTCCCATGCCTT
 
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JMFF043O04+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
JMFF024F01+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
JMFF015C13+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
JMFS108C07+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
JMFS094H11+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
JMFS024D07+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
JMFS091C03+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
JMFS151C09+           CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
                      ____________________________________________________________
consensus             CATAAACCAACTAGGAGAAGGGACAAATCGTTCAAAACAAAGAGGATCAGGACGCTTTGG
 
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JMFF043O04+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
JMFF024F01+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
JMFF015C13+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
JMFS108C07+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
JMFS094H11+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
JMFS024D07+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
JMFS091C03+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
JMFS151C09+           TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
                      ____________________________________________________________
consensus             TCCCAAATGAGCAAGCTTCTGTCCAAAGTACACACTGACCAGGCTTGGTTGCTTCCTTAA
 
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JMFF043O04+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
JMFF024F01+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
JMFF015C13+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
JMFS108C07+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
JMFS094H11+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
JMFS024D07+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
JMFS091C03+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
JMFS151C09+           AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
                      ____________________________________________________________
consensus             AACTGAATACAGAATGAAACAAACCACACACACTACTGTGTTCATACCAGCAGAGGTCAA
 
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JMFF043O04+           GAGTGCAGATAGATTCATCTTTGTCCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
JMFF024F01+           GAGTGCAGATAGATTCATCTTTGTCCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
JMFF015C13+           GAGTGCAGATAGATTCATCTTTGTCCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
JMFS108C07+           GAGTGCAGATAGATTCATCTTTGTTCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
JMFS094H11+           GAGTGCAGATAGATTCATCTTTGTTCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
JMFS024D07+           GAGTGCAGATAGATTCATCTTTGTTCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
JMFS091C03+           GAGTGCAGATAGATTCATCTTTGTTCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
JMFS151C09+           GAGTGCAGATAGATTCATCTTTGTTCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
                      ____________________________________________________________
consensus             GAGTGCAGATAGATTCATCTTTGTTCAAAATACAATGCGTAATCTTAAGGCAACTCATTT
 
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JMFF043O04+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
JMFF024F01+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
JMFF015C13+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
JMFS108C07+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
JMFS094H11+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
JMFS024D07+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
JMFS091C03+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
JMFS151C09+           GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
                      ____________________________________________________________
consensus             GCAAAATCATCCATTAAAGGCAAAGAGTTGCCACAAAATAAGCCCCGGTGTTCTCAGAAG
 
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JMFF043O04+           CCTAGAAGCCTTT                                               
JMFF024F01+           CCTAGAAGCCTTTTAAA                                           
JMFF015C13+           CCTAGAAGCCTTTTAAA                                           
JMFS108C07+           CCTAGAAGCCTTTTAAACGAAAATCGTGATGTTGCCTTGAAGGGATATATGATAGAAAGA
JMFS094H11+           CCTAGAAGCCTTTTAAACGAAAATCGTGATGTTGCCTTGAAGGGATATATGATAGAAAGA
JMFS024D07+           CCTAGAAGCCTTTTAAACGAAAATCGTGATGTTGCCTTGAAGGGATATATGATAGAAAGA
JMFS091C03+           CCTAGAAGCCTTTTAAACGAAAATCGTGATGTTGCCTTGAAGGGATATATGATAGAAAGA
JMFS151C09+           CCTAGAAGCCTTTTAAACGAAAATCGTGATGTTGCCTTGAAGGGATATATGATAGAAAGA
JMSF002A24+                       TTAAACGAAAATCGTGATGTTGCCTTGAAGGGATATATGATAGAAAGA
                      ____________________________________________________________
consensus             CCTAGAAGCCTTTTAAACGAAAATCGTGATGTTGCCTTGAAGGGATATATGATAGAAAGA
 
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JMFS108C07+           TTGCTTTGGATTGGGAGGGAAAAGAGAGGGCAAAAAAGGGAAAGAGAAAAAAAAGAAAAG
JMFS094H11+           TTGCTTTGGATTGGGAGGGAAAAGAGAGGGCAAAAAAGGGAAAGAGAAAAAAAAGAAAAG
JMFS024D07+           TTGCTTTGGATTGGGAGGGAAAAGAGAGGGCAAAAAAGGGAAAGAGAAAAAAAAGAAAAG
JMFS091C03+           TTGCTTTGGATTGGGAGGGAAAAGAGAGGGCAAAAAAGGGAAAGAGAAAAAAAAGAAAAG
JMFS151C09+           TTGCTTTGGATTGGGAGGGAAAAGAGAGGGCAAAAAAGGGAAAGAGAAAAAAAAGAAAAG
JMSF002A24+           TTGCTTTGGATTGGGAGGGAAAAGAGAGGGCAAAAAAGGGAAAGAGAAAAAAAAGAAAAG
                      ____________________________________________________________
consensus             TTGCTTTGGATTGGGAGGGAAAAGAGAGGGCAAAAAAGGGAAAGAGAAAAAAAAGAAAAG
 
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JMFS108C07+           ATTGAATTTTGGTTGAAAAGGAGAAGAAAATGAATGAAA                     
JMFS094H11+           ATTGAATTTTGGTTGAAAAGGAGAAGAAAATGAATGAAAGAAAAAACCCTAA        
JMFS024D07+           ATTGAATTTTGGTTGAAAAGGAGAAGAAAATGAATGAAAGAAAAAACCCTAAT       
JMFS091C03+           ATTGAATTTTGGTTGAAAAGGAGAAGAAAATGAATGAAAGAAAAAACCCTAAT       
JMFS151C09+           ATTGAATTTTGGTTGAAAAGGAGAAGAAAATGAATGAAAGAAAAAACCCTAATGAATGAG
JMSF002A24+           ATTGAATTTTGGTTGAAAAGGAGAAGAAAATGAATGAAAGAAAAAACCCTAATGAATGAG
                      ____________________________________________________________
consensus             ATTGAATTTTGGTTGAAAAGGAGAAGAAAATGAATGAAAGAAAAAACCCTAATGAATGAG
 
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JMFS151C09+           ATTCTATCGC                                                  
JMSF002A24+           ATTCTATCGCGAATCAATTTTGGGTTTGGAATTCTCATTGAAATTGAAATGCGGAAGAAG
                      ____________________________________________________________
consensus             ATTCTATCGCGAATCAATTTTGGGTTTGGAATTCTCATTGAAATTGAAATGCGGAAGAAG
 
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JMSF002A24+           TGGGTGGTGAGACAGATGCGATTTGCTGGCGATTTGAAAGATAATTGGAAAGGCGCCTCC
                      ____________________________________________________________
consensus             TGGGTGGTGAGACAGATGCGATTTGCTGGCGATTTGAAAGATAATTGGAAAGGCGCCTCC