Contig 003507:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001P20Sequence244003507 (2)672007011 (2)ref|XP_009606567.1|2e-55PREDICTED: cinnamoyl-CoA reductase 2-like, partial [Nicotiana tomentosiformis]
JMSF010F01Sequence397003507 (2)ref|XP_009590172.1|6e-08PREDICTED: cinnamoyl-CoA reductase 2-like [Nicotiana tomentosiformis]750007011 (2)ref|XP_006347591.1|9e-82PREDICTED: cinnamoyl-CoA reductase 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF010F01+                       CTGCATCAAATCATCATCATGGGTCTGGAGAGCAGCATGGACTGTGTA
                      ____________________________________________________________
consensus                         CTGCATCAAATCATCATCATGGGTCTGGAGAGCAGCATGGACTGTGTA
 
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JMSF010F01+           TCCTCGGAGAAGAAGGCATCTGACCAGAGCAGAACCCAGGCAGCCTGCAGCATCCATCAC
                      ____________________________________________________________
consensus             TCCTCGGAGAAGAAGGCATCTGACCAGAGCAGAACCCAGGCAGCCTGCAGCATCCATCAC
 
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JMSF010F01+           ACAAACACTATTCCCCCCTTTCATTTCCATGGCTGAATTTGAGGTGTACTGATTACTGAA
JMSF001P20+                                                                   TGAA
                      ____________________________________________________________
consensus             ACAAACACTATTCCCCCCTTTCATTTCCATGGCTGAATTTGAGGTGTACTGATTACTGAA
 
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JMSF010F01+           GCAAGAAACAGAGCCAACTAGCTAGAAAACTTGTTTTGTCTTTTTCTTGGTTTTGGCAGA
JMSF001P20+           GCAAGAAACAGAGCCAACTAGCTAGAAAACTTGTTTTGTCTTTTTCTTGGTTTTGGCAGA
                      ____________________________________________________________
consensus             GCAAGAAACAGAGCCAACTAGCTAGAAAACTTGTTTTGTCTTTTTCTTGGTTTTGGCAGA
 
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JMSF010F01+           ATGATTAAAGTGGGGGAGCAGATGATGGGGCAGTGTTGTGTTGTTGGCTGTTGAAGAGGC
JMSF001P20+           ATGATTAAAGTGGGGGAGCAGATGATGGGGCAGTGTTGTGTTGTTGGCTGTTGAAGAGGC
                      ____________________________________________________________
consensus             ATGATTAAAGTGGGGGAGCAGATGATGGGGCAGTGTTGTGTTGTTGGCTGTTGAAGAGGC
 
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JMSF010F01+           AAATCAGTGGTGGCTGAGAATTCAAAACCTCAAAAAGGGGAAATTAAAGGGGTATTAGCA
JMSF001P20+           AAATCAGTGGTGGCTGAGAATTCAAAACCTCAAAAAGGGGAAATTAAAGGGGTATTAGCA
                      ____________________________________________________________
consensus             AAATCAGTGGTGGCTGAGAATTCAAAACCTCAAAAAGGGGAAATTAAAGGGGTATTAGCA
 
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JMSF010F01+           ATGCAGTTATTGAGTAGATTATATACAGAGAGATGAGGTTGGCGGTCC            
JMSF001P20+           ATGCAGTTATTGAGTAGATTATATACAGAGAGATGAGGTTGGCGGTCCAAGAAAGAGTTC
                      ____________________________________________________________
consensus             ATGCAGTTATTGAGTAGATTATATACAGAGAGATGAGGTTGGCGGTCCAAGAAAGAGTTC