Contig 003499:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS136A12+                                                              TTTCCAATG
                      ____________________________________________________________
consensus                                                                TTTCCAATG
 
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JMFS136A12+           ACCTCTTTGTCTAGTGCCCTTTACTTTCTCCTTTTGGGAAACAGTGACAGAAGACAATCC
                      ____________________________________________________________
consensus             ACCTCTTTGTCTAGTGCCCTTTACTTTCTCCTTTTGGGAAACAGTGACAGAAGACAATCC
 
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JMFS136A12+           ACTGGGATCCAAGACACTAGAGGAATTTCCAGGAATCCACTGAAAGGATAAATTGGAAGC
                      ____________________________________________________________
consensus             ACTGGGATCCAAGACACTAGAGGAATTTCCAGGAATCCACTGAAAGGATAAATTGGAAGC
 
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JMFS136A12+           ATAGTCTGAGCCATGTCCAGAATGACGTCCGGAGACCACATTATTTGCACAATAGACAGA
                      ____________________________________________________________
consensus             ATAGTCTGAGCCATGTCCAGAATGACGTCCGGAGACCACATTATTTGCACAATAGACAGA
 
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JMFS136A12+           TGCTCCTGGAACATATGTGACGCCACTTCCATGGCTCCGATGCCCATTCTCAGGCCTATA
                      ____________________________________________________________
consensus             TGCTCCTGGAACATATGTGACGCCACTTCCATGGCTCCGATGCCCATTCTCAGGCCTATA
 
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JMFS136A12+           GGACCAGGAGCAGTATGGATAGGAACCATCCACTGGGGCCAACCCTGTCTCAACAGCAAT
JMFS046B08+                             ATAGGAGCCATTCACCGGGGCCAATCTTGTTTCAACAGCGAT
                      ____________________________________________________________
consensus             GGACCAGGAGCAGTATGGATAGGAGCCATTCACTGGGGCCAATCTTGTTTCAACAGCGAT
 
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JMFS136A12+           AAAAACGCCACGGCAATTCTTACAAGAAAGCCTTTTGTTTACATACTTTCTGAGATACTC
JMFS046B08+           AAAAACACCACGGCAATTCTTGCAAGAAAGTCTTTTGTTAACATACTTTCTTAGATACTC
                      ____________________________________________________________
consensus             AAAAACGCCACGGCAATTCTTGCAAGAAAGTCTTTTGTTTACATACTTTCTTAGATACTC
 
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JMFS136A12+           ATACTGAACATGACAGGTGGTGCACACAGTCCAAAATGTATCAAGTCTG           
JMFS046B08+           ATACTGAACGTGACAAGAGGTACACACAGTCCAAAAGGTATCAAGTCTGCTGTTAGAGGC
                      ____________________________________________________________
consensus             ATACTGAACGTGACAGGTGGTGCACACAGTCCAAAATGTATCAAGTCTGCTGTTAGAGGC
 
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JMFS046B08+           GGCAGAAGCAGTGTGCATGGAAGATATATTTCTCCTGTGGTCATAAGAGCTTTTTTTAGC
JMFS135F08+                                    ATATTTCTCCTGTGGTCATAAGAGCTTTTTTTAGC
JMSF046H19+                                                   TCATAAGAGCTTTTTTTAGC
                      ____________________________________________________________
consensus             GGCAGAAGCAGTGTGCATGGAAGATATATTTCTCCTGTGGTCATAAGAGCTTTTTTTAGC
 
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JMFS046B08+           AACATCAGATAGTACTGTCCATGCTTCAGAAACAAGCTTGAATGCACCGTCAGCTCCAAT
JMFS135F08+           AACATCAGATAGTACTGTCCATGCTTCAGAAACAAGCTTGAATGCACCGTCAGCTCCAAT
JMSF046H19+           AACATCAGATAGTACTGTCCATGCTTCAGAAACAAGCTTGAATGCACCGTCAGCTCCAAT
                      ____________________________________________________________
consensus             AACATCAGATAGTACTGTCCATGCTTCAGAAACAAGCTTGAATGCACCGTCAGCTCCAAT
 
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JMFS046B08+           GCTTTTGTTTTTGTCAGGGTGAAGTAAAACAGCCATCTTTTTGTATTGTTTTTTAACTTT
JMFS135F08+           GCTTTTGTTTTTGTCAGGGTGAAGTAAAACAGCCATCTTTTTGTATTGTTTTTTAACTTT
JMFS013B06+                TGTTTTTGTCAGGGTGAAGTAAAACAGCCATCTTTTTGTATTGTTTTTTAACTTT
JMSF046H19+           GCTTTTGTTTTTGTCAGGGTGAAGTAAAACAGCCATCTTTTTGTATTGTTTTTTAACTTT
                      ____________________________________________________________
consensus             GCTTTTGTTTTTGTCAGGGTGAAGTAAAACAGCCATCTTTTTGTATTGTTTTTTAACTTT
 
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JMFS046B08+           AGCCTTGTCTGCAGATGGGTCCAATCCTAAGACCGCATACAAGTCAACCTCTCCATTAAT
JMFS135F08+           AGCCTTGTCTGCAGATGGGTCCAATCCTAAGACCGCATACAAGTCAACCTCTCCATTAAT
JMFS013B06+           AGCCTTGTCTGCAGATGGGTCCAATCCTAAGACCGCATACAAGTCAACCTCTCCATTAAT
JMSF046H19+           AGCCTTGTCTGCAGATGGGTCCAATCCTAAGACCGCATACAAGTCAACCTCTCCATTAAT
                      ____________________________________________________________
consensus             AGCCTTGTCTGCAGATGGGTCCAATCCTAAGACCGCATACAAGTCAACCTCTCCATTAAT
 
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JMFS046B08+           TTTCATCTCAGCAGCAGAATAAACTCCAAATGTCAACACCATTTGAGCTATTCCCTCTAA
JMFS135F08+           TTTCATCTCAGCAGCAGAATAAACTCCAAATGTCAACACCATTTGAGCTATTCCCTCTAA
JMFS013B06+           TTTCATCTCAGCAGCAGAATAAACTCCAAATGTCAACACCATTTGAGCTATTCCCTCTAA
JMSF046H19+           TTTCATCTCAGCAGCAGAATAAACTCCAAATGTCAACACCATTTGAGCTATTCCCTCTAA
                      ____________________________________________________________
consensus             TTTCATCTCAGCAGCAGAATAAACTCCAAATGTCAACACCATTTGAGCTATTCCCTCTAA
 
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JMFS046B08+           ACCAGGACATAGCTTTTCAGCTTTCAAAGCAGAACTCTTTGCACCAACAAAGTCCTTGTC
JMFS135F08+           ACCAGGACATAGCTTTTCAGCTTTCAAAGCAGAACTCTTTGCACCAACAAAGTCCTTGTC
JMFS013B06+           ACCAGGACATAGCTTTTCAGCTTTCAAAGCAGAACTCTTTGCACCAACAAAGTCCTTGTC
JMSF046H19+           ACCAGGACATAGCTTTTCAGCTTTCAAAGCAGAACTCTTTGCACCAACAAAGTCCTTGTC
                      ____________________________________________________________
consensus             ACCAGGACATAGCTTTTCAGCTTTCAAAGCAGAACTCTTTGCACCAACAAAGTCCTTGTC
 
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JMFS046B08+           AGAAAATCTCTTCTCAGCATCTGCCTTAGCTTTAAGCGCTTCCTCTATGTTCACCTCCAT
JMFS135F08+           AGAAAATCTCTTCTCAGCATCTGCCTTAGCTTTAAGCGCTTCCTCTATGTTCACCTCCAT
JMFS013B06+           AGAAAATCTCTTCTCAGCATCTGCCTTAGCTTTAAGCGCTTCCTCTATGTTCACCTCCAT
JMSF046H19+           AGAAAATCTCTTCTCAGCATCTGCCTTAGCTTTAAGCGCTTCCTCTATGTTCACCTCCAT
                      ____________________________________________________________
consensus             AGAAAATCTCTTCTCAGCATCTGCCTTAGCTTTAAGCGCTTCCTCTATGTTCACCTCCAT
 
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JMFS046B08+           TACAAAAACCCGGAACTCAAAATCAGAGAAGCTGAAAGATAG                  
JMFS135F08+           TACAAAAACCCGGAACTCAAAATCAGAGAAGCTGAAAGATAGTTATAGGCAGCTCATTGG
JMFS013B06+           TACAAAAACCCGGAACTCAAAATCAGAGAAGCTGAAAGATAGTTATAGGCAGCTCATTGG
JMSF046H19+           TACAAAAACCCGGAACTCAAAATCAGAGAAGCTGAAAGATAGTTATAGGCAGCTCATTGG
                      ____________________________________________________________
consensus             TACAAAAACCCGGAACTCAAAATCAGAGAAGCTGAAAGATAGTTATAGGCAGCTCATTGG
 
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JMFS135F08+           GGTAAGTTGAAGCCTACTATGCCCAGTCTCCGATTACGCAAAAGCAGTTATCGAAATAAA
JMFS013B06+           GGTAAGTTGAAGCCTACTATGCCCAGTCTCCGATTACGCAAAAGCAGTTATCGAAATAAA
JMSF046H19+           GGTAAGTTGAAGCCTACTATGCCCAGTCTCCGATTACGCAAAAGCAGTTATCGAAATAAA
                      ____________________________________________________________
consensus             GGTAAGTTGAAGCCTACTATGCCCAGTCTCCGATTACGCAAAAGCAGTTATCGAAATAAA
 
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JMFS135F08+           TGAGACCGGACACTGATCAAAAGAAGCGCCGTCCCCGACACTGCTGCAGCTATCTAGATC
JMFS013B06+           TGAGACCGGACACTGATCAAAAGAAGCGCCGTCCCCGACACTGCTGCAGCTATCTAGATC
JMSF046H19+           TGAGACCGGACACTGATCAAAAGAAGCGCCGTCCCCGACACTGCTGCAGCTATCTAGATC
JMSF001C09+                         GATCAAAAGAAGCGCCGTCCCCGACACTGCTGCAGCTATCTAGATC
                      ____________________________________________________________
consensus             TGAGACCGGACACTGATCAAAAGAAGCGCCGTCCCCGACACTGCTGCAGCTATCTAGATC
 
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JMFS135F08+           TTCGCTATTCACGCCGAGCAATCCGCGTTAGGGCAC                        
JMFS013B06+           TTCGCTATTCACGCCGAGCAATCCGCGTTAGGGCACATCTGTGAAGTTATCCAGCAATAT
JMSF046H19+           TTCGCTATTCACGCCGAGCAATCCGCGTTAGGGCACATCTGTGAAGTTATCCAGCAATAT
JMSF001C09+           TTCGCTATTCACGCCGAGCAATCCGCGTTAGGGCACATCTGTGAAGTTATCCAGCAATAT
                      ____________________________________________________________
consensus             TTCGCTATTCACGCCGAGCAATCCGCGTTAGGGCACATCTGTGAAGTTATCCAGCAATAT
 
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JMFS013B06+           AACAAAGTTGAGGATCTTAGAAATACGCTCCGGCAGCTGACGGCGGTGAACGGCGAGAGA
JMSF046H19+           AACAAAGTTGAGGATCTTAGAAATACGCTCCGGCAGCTGACGGCGGTGAACGGCGAGAGA
JMSF001C09+           AACAAAGTTGAGGATCTTAGAAATACGCTCCGGCAGCTGACGGCGGTGAACGGCGAGAGA
                      ____________________________________________________________
consensus             AACAAAGTTGAGGATCTTAGAAATACGCTCCGGCAGCTGACGGCGGTGAACGGCGAGAGA
 
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JMFS013B06+           CCTGGTCGGAAAACGCCGATTGGTAAAGTATTTTTGGGCAAAATTTC             
JMSF046H19+           CCTGGTCGGAAAACGCCGATTGGTAAAGTATTTTTGGGCAAAATTTCTACTATTACTCCC
JMSF001C09+           CCTGGTCGGAAAACGCCGATTGGTAAAGTATTTTTGGGCAAAATTTCTACTATTACTCCC
                      ____________________________________________________________
consensus             CCTGGTCGGAAAACGCCGATTGGTAAAGTATTTTTGGGCAAAATTTCTACTATTACTCCC