Contig 003496:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN011G07+                                                        GTCGTCCATTCTTCC
JMFS168C10+                                                         TCGTCCATTCTCCC
                      ____________________________________________________________
consensus                                                          GTCGTCCATTCTTCC
 
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JMFN011G07+           GCCGTGGCAGCCTAGGTCTCCT-CCCCCCTTGTCGCAGTCCACCAGCTCTTGCTCCGACA
JMFS168C10+           GCCGTGGCAGCNTAGGTCTCCTCCCCCCCTTGTCGCAGTCCACCAGCTCTTGCTCCGACA
                      ____________________________________________________________
consensus             GCCGTGGCAGCCTAGGTCTCCTCCCCCCCTTGTCGCAGTCCACCAGCTCTTGCTCCGACA
 
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JMFN011G07+           ATGAGACTAATTCGCCTCCTGATATCTTCACGATTCCCTCCACGGCCGCCACCGCAGAAA
JMFS168C10+           ATGAGACTAATTCGCCTCCTG--ATCTTCACGATTCCCTCCACGGCCGCCACCGCAGAAA
                      ____________________________________________________________
consensus             ATGAGACTAATTCGCCTCCTGATATCTTCACGATTCCCTCCACGGCCGCCACCGCAGAAA
 
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JMFN011G07+           ATGCCCAGCAGCATCCACAAACGCCTTGATTCTTGACTGGAGTGACAGCTCCCTCTTTTC
JMFS168C10+           ATGCCCAGCAGCATCCACAAACGCCTTGATTCTTGACTGGAGTGACAGCTCCCTCTTTTC
                      ____________________________________________________________
consensus             ATGCCCAGCAGCATCCACAAACGCCTTGATTCTTGACTGGAGTGACAGCTCCCTCTTTTC
 
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JMFN011G07+           TCCAGTCCACGGCGGAGGGGATGTCGGTCACATTCTCGTACCTAAAGGGCATGCTCCTCC
JMFS168C10+           TCCAGTCCACGGCGGAGGGGATGTCGGTCACATTCTCGTACCTAAAGGGCATGCTCCTCC
                      ____________________________________________________________
consensus             TCCAGTCCACGGCGGAGGGGATGTCGGTCACATTCTCGTACCTAAAGGGCATGCTCCTCC
 
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JMFN011G07+           AGGGGTTCCGGGGAGAGACCGGCCTCTTATATCCATTTTTGGTGGACACAAATTCATCAT
JMFS168C10+           AGGGGTTCCGGGGAGAGACCGGCCTCTTATATCCATTTTTGGTGGACACAAATTCATCAT
                      ____________________________________________________________
consensus             AGGGGTTCCGGGGAGAGACCGGCCTCTTATATCCATTTTTGGTGGACACAAATTCATCAT
 
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JMFN011G07+           TAGTTAAATCCGCAAACTCGTTGATCCCCAATGTGTAAGGCCGATCTCCAGCTTGATTGA
JMFS168C10+           TAGTTAAATCCGCAAACTCGTTGATCCCCAATGTGTAAGGCCGATCTCCAGCTTGATTGA
                      ____________________________________________________________
consensus             TAGTTAAATCCGCAAACTCGTTGATCCCCAATGTGTAAGGCCGATCTCCAGCTTGATTGA
 
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JMFN011G07+           AAGATTCAATAGCCTTTACATTCTCTTTAAATATACTAAACCGTTTTGCCTTCTCGGTCT
JMFS168C10+           AAGATTCAATAGCCTTTACATTCTCTTTAAATATACTAAACCGTTTTGCCTTCTCGGTCT
                      ____________________________________________________________
consensus             AAGATTCAATAGCCTTTACATTCTCTTTAAATATACTAAACCGTTTTGCCTTCTCGGTCT
 
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JMFN011G07+           CGTCTGCATACACCCGTCCATATCGAGCCATCCAGTCCTCGTGTCTCTTCTCCATCACAT
JMFS168C10+           CGTCTGCATACACCCGTCCATATCGAGCCATCCAGTCCTCGTGTCTCTTCTCCATCACAT
                      ____________________________________________________________
consensus             CGTCTGCATACACCCGTCCATATCGAGCCATCCAGTCCTCGTGTCTCTTCTCCATCACAT
 
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JMFN011G07+           CATCGTCATCCTCGTTTAAGCCCTGCATCGACTTGGCAGCTTTGCTGCAGCAAGCCAGAA
JMFS168C10+           CATCGTCATCCTCGTTTAAGCCCTGCATCGACTTGGCAGCTTTGCTGCAGCAAGCCAGAA
                      ____________________________________________________________
consensus             CATCGTCATCCTCGTTTAAGCCCTGCATCGACTTGGCAGCTTTGCTGCAGCAAGCCAGAA
 
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JMFN011G07+           TAGCTGCAAAAACGATAAGATTTTTGATCAATCTTGACACCATTTTTGTTTCTTGTTGAA
JMFS168C10+           TAGCTGCAAAAACGATAAGATTTTTGATCAATCTTGACACCATTTTTGTTTCTTGTTGAA
                      ____________________________________________________________
consensus             TAGCTGCAAAAACGATAAGATTTTTGATCAATCTTGACACCATTTTTGTTTCTTGTTGAA