| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026L01 | Sequence | 609 | 003284 (2) | ref|XP_009787180.1| | 2e-09 | PREDICTED: uncharacterized protein LOC104235147 isoform X3 [Nicotiana sylvestri | 799 | 003494 (5) | ref|XP_009596457.1| | 5e-97 | PREDICTED: uncharacterized protein LOC104092544 isoform X1 [Nicotiana tomentosi |
| JMFF047O07 | Sequence | 513 | 003284 (2) | ref|XP_009787180.1| | 1e-08 | PREDICTED: uncharacterized protein LOC104235147 isoform X3 [Nicotiana sylvestri | 433 | 003494 (5) | ref|XP_008390745.1| | 9e-20 | PREDICTED: uncharacterized protein LOC103452996 isoform X1 [Malus domestica] |
| JMFS066E02 | Sequence | 627 | 003494 (5) | ref|XP_004296783.1| | 86.7 | PREDICTED: uncharacterized protein LOC101291421 [Fragaria vesca subsp. vesca] | |||||
| JMFS161D05 | Sequence | 572 | 003494 (5) | ref|XP_009596460.1| | 6e-60 | PREDICTED: uncharacterized protein LOC104092544 isoform X3 [Nicotiana tomentosi | |||||
| JMFS166C05 | Sequence | 619 | 003494 (5) | emb|CDO98932.1| | 2e-18 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF047O07- GACTCTTATCCCTAATAATTAATAGTTAATAGGAAAACGTTACATATAC
rJMFF026L01- AGTTAATAGGAAAACGTTACATATAC
____________________________________________________________
consensus GACTCTTATCCCTAATAATTAATAGTTAATAGGAAAACGTTACATATAC
. : . : . : . : . : . :
rJMFF047O07- GCAGCCTGCTTCACATTTCATGAAGTTCAAGATACCTCAAAACCATATAACTGGAGGCAG
rJMFF026L01- GCAGCCTGCTTCACATTTCATGAAGTTCAAGATACCTCAAAACCATATAACTGGAGGCAG
____________________________________________________________
consensus GCAGCCTGCTTCACATTTCATGAAGTTCAAGATACCTCAAAACCATATAACTGGAGGCAG
. : . : . : . : . : . :
rJMFF047O07- TGAAGTTCAAGAAGAGAAAAACACTGCTACTTTTACACATCCTTGCCCAACCCTCAATAG
rJMFF026L01- TGAAGTTCAAGAAGAGAAAAACACTGCTACTTTTACACATCCTTGCCCAACCCTCAATAG
____________________________________________________________
consensus TGAAGTTCAAGAAGAGAAAAACACTGCTACTTTTACACATCCTTGCCCAACCCTCAATAG
. : . : . : . : . : . :
rJMFF047O07- AGGTTACAACTATTAACAATATTGCCAGCTTAATTATCACACGTTGCTAGAGCTTGGGGA
rJMFF026L01- AGGTTACAACTATTAACAATATTGCCAGCTTAATTATCACACGTTGCTAGAGCTTGGGGA
____________________________________________________________
consensus AGGTTACAACTATTAACAATATTGCCAGCTTAATTATCACACGTTGCTAGAGCTTGGGGA
. : . : . : . : . : . :
rJMFF047O07- AAGCTGAACTCGCAATGCATAATATCGACTATACATGAACTTGAGACCCATTGCAGCTCC
rJMFF026L01- AAGCTGAACTCGCAATGCATAATATCGACTATACATGAACTTGAGACCCATTGCAGCTCC
____________________________________________________________
consensus AAGCTGAACTCGCAATGCATAATATCGACTATACATGAACTTGAGACCCATTGCAGCTCC
. : . : . : . : . : . :
rJMFF047O07- GAAACCCAAAACTGATGACAGCGTTATTGAATAAATGGGTGGTAAATGAAGCATAGAGTA
rJMFF026L01- GAAACCCAAAACTGATGACAGCGTTATTGAATAAATGGGTGGTAAATGAAGCATAGAGTA
____________________________________________________________
consensus GAAACCCAAAACTGATGACAGCGTTATTGAATAAATGGGTGGTAAATGAAGCATAGAGTA
. : . : . : . : . : . :
rJMFF047O07- GAAGAGGCAAAGAATCATGGCGACNAGTGCAAATTCTAAAGCTGCGTAGGCCCATATGTA
rJMFF026L01- GAAGAGGCAAAGAATCATGGCGACAAGTGCAAATTCTAAAGCTGCGTAGGCCCATATGTA
____________________________________________________________
consensus GAAGAGGCAAAGAATCATGGCGACAAGTGCAAATTCTAAAGCTGCGTAGGCCCATATGTA
. : . : . : . : . : . :
rJMFF047O07- CTGTTTAATTGCTTGGATGACTGC
rJMFF026L01- CTGTTTAATTGCTTGGATGACTGCAAAAATAGATGCCAAAAGACCCAAAGTAAACGAGAA
____________________________________________________________
consensus CTGTTTAATTGCTTGGATGACTGCAAAAATAGATGCCAAAAGACCCAAAGTAAACGAGAA
. : . : . : . : . : . :
rJMFF026L01- CGTTATAGCAATCACCAGTGCCTTAGTTTTCATGCCATGGATCAGTAACTTCTCAAGAAA
____________________________________________________________
consensus CGTTATAGCAATCACCAGTGCCTTAGTTTTCATGCCATGGATCAGTAACTTCTCAAGAAA
. : . : . : . : . : . :
rJMFF026L01- GAAGAAGTAGCATACTGTACTAACCAAGACAAGCACCACAAAGTCCTGCCAAGCACTTAT
____________________________________________________________
consensus GAAGAAGTAGCATACTGTACTAACCAAGACAAGCACCACAAAGTCCTGCCAAGCACTTAT
. : . : . : . : . : . :
rJMFF026L01- TCTTTGTGCGTTCAAAGTTAGCTGATTATGGTCCAGCATAATATTTCCTTGGGTAGTACT
____________________________________________________________
consensus TCTTTGTGCGTTCAAAGTTAGCTGATTATGGTCCAGCATAATATTTCCTTGGGTAGTACT
. : . : . : . : . : . :
rJMFF026L01- TGGCACAAAATGCAAAGTTACAGGTAAATTTAGCACTTCCTGCTGACAAACGTCACAATT
JMFS161D05+ GCAAAGTTACGGGTAAGTTTAGCACTTCTTGCCTACACACCTCACAGTC
____________________________________________________________
consensus TGGCACAAAATGCAAAGTTACGGGTAAGTTTAGCACTTCTTGCTTACACACGTCACAGTT
. : . : . : . : . : . :
rJMFF026L01- TTTGTTTCCTTTCATGCTAAACCACTTAATTGCACACTCTTCGTGTACAAGTCTGAGGTC
JMFS161D05+ TTTGTTCCCTTTGATGCTAAACCACTTAATCGCACAGTCTTCGTGTACGAGCCTGAGGTC
____________________________________________________________
consensus TTTGTTTCCTTTGATGCTAAACCACTTAATTGCACAGTCTTCGTGTACGAGTCTGAGGTC
. : . : . : . : . : . :
rJMFF026L01- ACCTTTGCAGCTGCACTCCATCTTCAG
JMFS161D05+ ACCTTTGCAACCGCACTCCATCTTCAGCGTGTTTTTTTCGCTGCATGCTTCGAGACAAAT
____________________________________________________________
consensus ACCTTTGCAGCTGCACTCCATCTTCAGCGTGTTTTTTTCGCTGCATGCTTCGAGACAAAT
. : . : . : . : . : . :
JMFS161D05+ TCGGCAAACAGCTTCCTCTTCAGGAATCTCGTGATCCTCTTCCTCGGGCGCAGGCGTAAT
____________________________________________________________
consensus TCGGCAAACAGCTTCCTCTTCAGGAATCTCGTGATCCTCTTCCTCGGGCGCAGGCGTAAT
. : . : . : . : . : . :
JMFS161D05+ TTCATCATCGGTGTTACGGTCTTGCTCTTCGCGGGTGGGAAAAGATGTTGATCTCACAAT
____________________________________________________________
consensus TTCATCATCGGTGTTACGGTCTTGCTCTTCGCGGGTGGGAAAAGATGTTGATCTCACAAT
. : . : . : . : . : . :
JMFS161D05+ AACAACGGAAAGCGACCTTGTAACAGCAGCTTGAGACGTGCCAGTTCGCAAAGAATGTGA
JMFS066E02+ ATGTGA
JMFS166C05+ ATGTGA
____________________________________________________________
consensus AACAACGGAAAGCGACCTTGTAACAGCAGCTTGAGACGTGCCAGTTCGCAAAGAATGTGA
. : . : . : . : . : . :
JMFS161D05+ TTTCTGCCGTTCACCTACTGTCCTTGCAGAAGTAGGTGTAGGCACAGTAGGGGAGGAGTT
JMFS066E02+ TTTCTGCCGTTCACCTACTGTCCTTGCAGAAGTAGGTGTAGGCACAGTAGGGGAGGAGTT
JMFS166C05+ TTTCTGCCGTTCACCTACTGTCCTTGCAGAAGTAGGTGTAGGCACAGTAGGGGAGGAGTT
____________________________________________________________
consensus TTTCTGCCGTTCACCTACTGTCCTTGCAGAAGTAGGTGTAGGCACAGTAGGGGAGGAGTT
. : . : . : . : . : . :
JMFS161D05+ TGAAGCAGGCGTCACAGGCAAAGAAGTACATCTCTTCCAACTCGAAAAAATAGGGCTTTC
JMFS066E02+ TGAAGCAGGCGTCACAGGCAAAGAAGTACATCTCTTCCAACTCGAAAAAATAGGGCTTTC
JMFS166C05+ TGAAGCAGGCGTCACAGGCAAAGAAGTACATCTCTTCCAACTCGAAAAAATAGGGCTTTC
____________________________________________________________
consensus TGAAGCAGGCGTCACAGGCAAAGAAGTACATCTCTTCCAACTCGAAAAAATAGGGCTTTC
. : . : . : . : . : . :
JMFS161D05+ TGGAGCTATCTTCGAATCCGGACGAAGAAGGGAGCTCCTTTCACCCTCAGAAGCGCCCGC
JMFS066E02+ TGGAGCTATCTTCGAATCCGGACGAAGAAGGGAGCTCCTTTCACCCTCAGAAGCGCCCGC
JMFS166C05+ TGGAGCTATCTTCGAATCCGGACGAAGAAGGGAGCTCCTTTCACCCTCAGAAGCGCCCGC
____________________________________________________________
consensus TGGAGCTATCTTCGAATCCGGACGAAGAAGGGAGCTCCTTTCACCCTCAGAAGCGCCCGC
. : . : . : . : . : . :
JMFS161D05+ AATC
JMFS066E02+ AATCTTCCTCTTGAAGCTCAAACCCCGAAAGAATCCTCCCCCAGTTGGACTCCCATTCGA
JMFS166C05+ AATCTTCCTCTTGAAGCTCAAACCCCGAAAGAATCCTCCCCCAGTTGGACTCCCATTCGA
____________________________________________________________
consensus AATCTTCCTCTTGAAGCTCAAACCCCGAAAGAATCCTCCCCCAGTTGGACTCCCATTCGA
. : . : . : . : . : . :
JMFS066E02+ AACCCCCGGAGACTGAACCAAACACTTACTCCGATTGCTGCTCCCAACGCCATTTCTCGG
JMFS166C05+ AACCCCCGGAGACTGAACCAAACACTTACTCCGATTGCTGCTCCCAACGCCATTTCTCGG
____________________________________________________________
consensus AACCCCCGGAGACTGAACCAAACACTTACTCCGATTGCTGCTCCCAACGCCATTTCTCGG
. : . : . : . : . : . :
JMFS066E02+ AGGAATTTGAAGCGACAGATCCGGGTGCCTCATAGAATTCACCGCAGCTTTTGCCGATTC
JMFS166C05+ AGGAATTTGAAGCGACAGATCCGGGTGCCTCATAGAATTCACCGCAGCTTTTGCCGATTC
____________________________________________________________
consensus AGGAATTTGAAGCGACAGATCCGGGTGCCTCATAGAATTCACCGCAGCTTTTGCCGATTC
. : . : . : . : . : . :
JMFS066E02+ CCTCTTCTGAAAA
JMFS166C05+ CCTCTTCTGAAAACCCGCCTGCGGCGATAACGGAGAAACTGGGCGCGCGTCATCGCCATC
____________________________________________________________
consensus CCTCTTCTGAAAACCCGCCTGCGGCGATAACGGAGAAACTGGGCGCGCGTCATCGCCATC
. : . : . : . : . : . :
JMFS166C05+ TGGAGCTGAACTAGAGATTGCGTCTTGTTCGGGGGTTTTGGGGGTCTCCATTACTGTGTA
____________________________________________________________
consensus TGGAGCTGAACTAGAGATTGCGTCTTGTTCGGGGGTTTTGGGGGTCTCCATTACTGTGTA
. : . : . : . : . : . :
JMFS166C05+ AAATCAAGAAAACGAATTGAACTGAGAAAAAGGAGCTGGCTTTATTGAGTTTTCTTTGCA
____________________________________________________________
consensus AAATCAAGAAAACGAATTGAACTGAGAAAAAGGAGCTGGCTTTATTGAGTTTTCTTTGCA
. : . : . : . : . : . :
JMFS166C05+ AGAGCATACAGACAGAGATAGATATACGAAGGGAGTATATGTATGAGTAGAGGAAACATA
____________________________________________________________
consensus AGAGCATACAGACAGAGATAGATATACGAAGGGAGTATATGTATGAGTAGAGGAAACATA