Contig 003492:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052P17+                                      CTTGACCATGGTGATTTGAGATGACCCCGATCA
                      ____________________________________________________________
consensus                                        CTTGACCATGGTGATTTGAGATGACCCCGATCA
 
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JMSF052P17+           GAAGAAGAACAGGAAGCCGGTGAGGAAGAGGNTACTACGAAGAGAACCGATCTCAAATGG
                      ____________________________________________________________
consensus             GAAGAAGAACAGGAAGCCGGTGAGGAAGAGGNTACTACGAAGAGAACCGATCTCAAATGG
 
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JMSF052P17+           ACCCACGACGTCGATGACGATGACGACGAAGATGAAGACGGCGAGGAGGAATTCGAAGTC
                      ____________________________________________________________
consensus             ACCCACGACGTCGATGACGATGACGACGAAGATGAAGACGGCGAGGAGGAATTCGAAGTC
 
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JMSF052P17+           GAAGTCTGACTCCGTTTTAGAGATTTCATCTACTCCTATTATCCCTGTTTCTCACTCTAC
                      ____________________________________________________________
consensus             GAAGTCTGACTCCGTTTTAGAGATTTCATCTACTCCTATTATCCCTGTTTCTCACTCTAC
 
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JMSF052P17+           TCAAAAATATCTATCTAATCTACAGATTTCTAGGGTTTCAATGCTCAAACTTCCATCGAA
                      ____________________________________________________________
consensus             TCAAAAATATCTATCTAATCTACAGATTTCTAGGGTTTCAATGCTCAAACTTCCATCGAA
 
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JMSF052P17+           AAATTTTAAAAAATAAAAATAAAAAATCCCCCCTTTCTGGTATTTTACCTAGAAGCGTAG
JMFS165D11+                                                  GTATTTTACCTAGAAGCGTAG
                      ____________________________________________________________
consensus             AAATTTTAAAAAATAAAAATAAAAAATCCCCCCTTTCTGGTATTTTACCTAGAAGCGTAG
 
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JMSF052P17+           AAGACGGCGGTGGCCAGGGCGAGACCAGCCAAGACCGTGACGGCGACAGCTACAGTAGCA
JMFS165D11+           AAGACGGCGGTGGCCAGGGCGAGACCAGCCAAGACCGTGACGGCGACAGCTACAGTAGCA
                      ____________________________________________________________
consensus             AAGACGGCGGTGGCCAGGGCGAGACCAGCCAAGACCGTGACGGCGACAGCTACAGTAGCA
 
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JMSF052P17+           TCGGGAACTCCCGTCTTNTTCCAGAAGCCGCCAGACGCGCCGCCGAAACCGATGATACCT
JMFS165D11+           TCGGGAACTCCCGTCTTCTTCCAGAAGCCGCCAGACGCGCCGCCGAAACCGATGATACCT
                      ____________________________________________________________
consensus             TCGGGAACTCCCGTCTTCTTCCAGAAGCCGCCAGACGCGCCGCCGAAACCGATGATACCT
 
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JMSF052P17+           CCTCCGAGCTTACTGATAGCGCCGCCGACAGCCTCGACCAAAGAACCGCCGGAGACGGGC
JMFF048I16+                                                                 ACGGGC
JMFS165D11+           CCTCCGAGCTTACTGATAGCGCCGCCGACAGCCTCGACCAAAGAACCGCCGGAGACGGGC
                      ____________________________________________________________
consensus             CCTCCGAGCTTACTGATAGCGCCGCCGACAGCCTCGACCAAAGAACCGCCGGAGACGGGC
 
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JMSF052P17+           ATGGAGTCGGAGAGAATAAAAAGGCGATTTTACCCCCGGCGAGCTCAGATTCACCGAACC
JMFF048I16+           ATGGAGTCGGAGAGAATAAAAAGGCGATTTTACCCCCGGCGAGCTCAGATTCACCGAACC
JMFS165D11+           ATGGAGTCGGAGAGAATAAAAAGGCGATTTTACCCCCGGCGAGCTCAGATTCACCGAACC
                      ____________________________________________________________
consensus             ATGGAGTCGGAGAGAATAAAAAGGCGATTTTACCCCCGGCGAGCTCAGATTCACCGAACC
 
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JMSF052P17+           AAAGCGAGTAGATTTTCCACCATAACAACCACCTCCACCACCCAGCTGAACAAAAGCAGC
JMFF048I16+           AAAGCGAGTAGATTTTCCACCATAACAACCACCTCCACCACCCAGCTGAACAAAAGCAGC
JMFS165D11+           AAAGCGAGTAGATTTTCCACCATAACAACCACCTCCACCACCCAGCTGAACAAAAGCAGC
                      ____________________________________________________________
consensus             AAAGCGAGTAGATTTTCCACCATAACAACCACCTCCACCACCCAGCTGAACAAAAGCAGC
 
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JMSF052P17+           ATTCACTTCAACTGCTTTTCCTTTATTGTTCTGAGGAATCGCTTTTTCTTTTCTTTTCAC
JMFF048I16+           ATTCACTTCAACTGCTTTTCCTTTATTGTTCTGAGGAATCGCTTTTTCTTTTCTTTTCAC
JMFS165D11+           ATTCACTTCAACTGCTTTTCCTTTATTGTTCTGAGGAATCGCTTTTTCTTTTCTTTTCAC
                      ____________________________________________________________
consensus             ATTCACTTCAACTGCTTTTCCTTTATTGTTCTGAGGAATCGCTTTTTCTTTTCTTTTCAC
 
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JMFF048I16+           AA-TTTTTTTTTTGGGTTTTCGCTTTTGTTTTTTACACTCCCATGAGTCTCTTTCTTTGT
JMFF008F19+              TTTTTTTTTTGGGTTTTCGCTTTTGTTTTTTACACTCCCATGAGTCTCTTTCTTTGT
JMFF017P23+              TTTTTTTTTTGGGTTTTCGCTTTNGTNTTTTACACTCCCATGAGTCTCTTTCTTTGT
JMFS165D11+           AATTTTTTTTTTTGGGTTTTCGCTTTTGTTTTTTACACTCCCATGAGTCTCTTTCTTTGT
                      ____________________________________________________________
consensus             AATTTTTTTTTTTGGGTTTTCGCTTTTGTTTTTTACACTCCCATGAGTCTCTTTCTTTGT
 
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JMFF048I16+           CTCTTCTCTCTAATCACTGTAAATTAGGTGCGCAGTAGAGAGACTGCGTTTGATCTCACT
JMFF008F19+           CTCTTCTCTCTAATCACTGTAAATTAGGTGCGCAGTAGAGAGACTGCGTTTGATCTCACT
JMFF017P23+           CTCTTCTCTCTAATCACTGTAAATTAGGTGCGCAGTAGAGAGACTGCGTTTGATCTCACT
JMFS165D11+           CTCTTCTCTCTAATCACTGTAAATTAGGTGCGCAGTAGAGAGACTGCGTTTGATCTCACT
                      ____________________________________________________________
consensus             CTCTTCTCTCTAATCACTGTAAATTAGGTGCGCAGTAGAGAGACTGCGTTTGATCTCACT
 
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JMFF048I16+           CTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTATAAAGT                     
JMFF008F19+           CTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTATAAAGT                     
JMFF017P23+           CTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTATAAAGT                     
JMFS165D11+           CTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTATAAAGTGTTGTGATCCAGAGACTTGGA
                      ____________________________________________________________
consensus             CTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTATAAAGTGTTGTGATCCAGAGACTTGGA