Contig 003491:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS106H11Sequence617003491 (4)
JMFS106H12Sequence479003491 (4)
JMFS162H09Sequence543003491 (4)
JMSF021C18Sequence662003491 (4)110024551

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021C18+ TGCCAGTATAAACTGTGAATAGAACATTTTTAT
                      ____________________________________________________________
consensus TGCCAGTATAAACTGTGAATAGAACATTTTTAT
 
. : . : . : . : . : . :
JMSF021C18+ TCTCTTTCTATTTCACTACCTCACCAAGCAACTCGTACAACAACAACAAGAACAACAACA
JMFS106H11+ AACAACAACAAGAACAACAACA
                      ____________________________________________________________
consensus TCTCTTTCTATTTCACTACCTCACCAAGCAACTCGTACAACAACAACAAGAACAACAACA
 
. : . : . : . : . : . :
JMSF021C18+ AATTCTTCTCTTTATTGATACATATATACACGTAAAACTCTAATTCTCACTCTGCAGCCC
JMFS106H11+ AATTCTTCTCTTTATTGATACATATATACACGTAAAACTCTAATTCTCACTCTGCAGCCC
                      ____________________________________________________________
consensus AATTCTTCTCTTTATTGATACATATATACACGTAAAACTCTAATTCTCACTCTGCAGCCC
 
. : . : . : . : . : . :
JMSF021C18+ AAAACAATCACAAACACCCAAACTCAAACGCTGAGAATCAAAAACCCTAGCTTTTTTCCT
JMFS106H11+ AAAACAATCACAAACACCCAAACTCAAACGCTGAGAATCAAAAACCCTAGCTTTTTTCCT
JMFS106H12+ TCCT
JMFS162H09+ AAACACCCAAACTCAAACGCTGAGAATCAAAAACCCTAGCTTTTTTCCT
                      ____________________________________________________________
consensus AAAACAATCACAAACACCCAAACTCAAACGCTGAGAATCAAAAACCCTAGCTTTTTTCCT
 
. : . : . : . : . : . :
JMSF021C18+ CAACCACTTCAATCAGGACCAGGGCACAAAACGAACATCAAAATAAATCCCATATCCAAC
JMFS106H11+ CAACCACTTCAATCAGGACCAGGGCACAAAACGAACATCAAAATAAATCCCATATCCAAC
JMFS106H12+ CATCCACTTCAATCAGGACCAGGGCACAGAACGAACATCAAAATAAATCCCATATCCAAC
JMFS162H09+ CAACCACTTCAATCAGGACCAGGGCACAAAACGAACATCAAAATAAATCCCATATCCAAC
                      ____________________________________________________________
consensus CAACCACTTCAATCAGGACCAGGGCACAAAACGAACATCAAAATAAATCCCATATCCAAC
 
. : . : . : . : . : . :
JMSF021C18+ TCCAATCCCAGTCCAGCTACGACCTCTAGTGTATCCCCCCACAAACAACTAGCTCAAATA
JMFS106H11+ TCCAATCCCAGTCCAGCTACGACCTCTAGTGTATCCCCCCACAAACAACTAGCTCAAATA
JMFS106H12+ TCCAATCCCAGTCCAGCTACGACCTCTAGTGTATCCCCCCACAAGCAACTAGCTCAAATA
JMFS162H09+ TCCAATCCCAGTCCAGCTACGACCTCTAGTGTATCCCCCCACAAACAACTAGCTCAAATA
                      ____________________________________________________________
consensus TCCAATCCCAGTCCAGCTACGACCTCTAGTGTATCCCCCCACAAACAACTAGCTCAAATA
 
. : . : . : . : . : . :
JMSF021C18+ CTAAAGTTAGGGTTTTACAGGTAAGATTCATCAAACTTTGCAATTGACGAAACTCAAAAC
JMFS106H11+ CTAAAGTTAGGGTTTTACAGGTAAGATTCATCAAACTTTGCAATTGACGAAACTCAAAAC
JMFS106H12+ CTAAAGTTAGGGTTTTACAGGTAAGATTCATCAAACTTTGCAATTGACGAAACTCAAAAC
JMFS162H09+ CTAAAGTTAGGGTTTTACAGGTAAGATTCATCAAACTTTGCAATTGACGAAACTCAAAAC
                      ____________________________________________________________
consensus CTAAAGTTAGGGTTTTACAGGTAAGATTCATCAAACTTTGCAATTGACGAAACTCAAAAC
 
. : . : . : . : . : . :
JMSF021C18+ CCCTAATTGGCGCTTCAACCCCTTCGGAAATCGAAATCAGAACGCAGCAAACACGCGGAC
JMFS106H11+ CCCTAATTGGCGCTTCAACCCCTTCGGAAATCGAAATCAGAACGCAGCAAACACGCGGAC
JMFS106H12+ CCCTAATTGGCGCTTCAACCCCTTCGGAAATCGAAATCAGAACGCAGCAAACACGCGGAC
JMFS162H09+ CCCTAATTGGCGCTTCAACCCCTTCGGAAATCGAAATCAGAACGCAGCAAACACGCGGAC
                      ____________________________________________________________
consensus CCCTAATTGGCGCTTCAACCCCTTCGGAAATCGAAATCAGAACGCAGCAAACACGCGGAC
 
. : . : . : . : . : . :
JMSF021C18+ CACTCCTCTCCCAGCTGAGATCGAGCTACACCCTCTCCCAGCAAATGAACTTCGACACGC
JMFS106H11+ CACTCCTCTCCCAGCTGAGATCGAGCTACACCCTCTCCCAGCAAATGAACTTCGACACGC
JMFS106H12+ CACTCCTCTCCCAGCTGAGATCGAGCTACACCCTCTCCCAGCAAATGAACTTCGACACGC
JMFS162H09+ CACTCCTCTCCCAGCTGAGATCGAGCTACACCCTCTCCCAGCAAATGAACTTCGACACGC
                      ____________________________________________________________
consensus CACTCCTCTCCCAGCTGAGATCGAGCTACACCCTCTCCCAGCAAATGAACTTCGACACGC
 
. : . : . : . : . : . :
JMSF021C18+ TTGTATACGCAGAGACGGAGAGAGAAACTGGCGGCCGGTACGGCGAGGACGAGTGGTGAT
JMFS106H11+ TTGTATACGCAGAGACGGAGAGAGAAACTGGCGGCCGGTACGGCGAGGACGAGTGGTGAT
JMFS106H12+ TTGTATACGCAGAGACGGAGAGAGAAACTGGCGGCCGGTACGGCGAGGACGAGTGGTGAT
JMFS162H09+ TTGTATACGCAGAGACGGAGAGAGAAACTGGCGGCCGGTACGGCGAGGACGAGTGGTGAT
                      ____________________________________________________________
consensus TTGTATACGCAGAGACGGAGAGAGAAACTGGCGGCCGGTACGGCGAGGACGAGTGGTGAT
 
. : . : . : . : . : . :
JMSF021C18+ TGCTACGAAGAAGAAGAAGAAGAAGAAGCGCAGAGATTTTGCTGGGAAAGCTCAAAGATT
JMFS106H11+ TGCTACGAAGAAGAAGAAGAAGAAGAAGCGCAGAGATTTTGCTGGGAAAGCTCAAAGATT
JMFS106H12+ TGCTACGAAGAAGAAGAAGAAGAAGAAGCGCAGAGATTTTGCTGGGAAAGCTCAAAGATT
JMFS162H09+ TGCTACGAAGAAGAAGAAGAAGAAGAAGCGCAGAGATTTTGCTGGGAAAGCTCAAAGATT
                      ____________________________________________________________
consensus TGCTACGAAGAAGAAGAAGAAGAAGAAGCGCAGAGATTTTGCTGGGAAAGCTCAAAGATT
 
. : . : . : . : . : . :
JMSF021C18+ TTGTTAGAGTGATGACTTCTTGCTTACT
JMFS106H11+ TTGTTAGAGTGATGACTTCTTGCTTACTGAATTTTGATTTTGGGAGTGAAAGCGC
JMFS106H12+ TTGTTAGAGTGATGACTTCTTGCTTACTGAATTTTGATTTTGGGAGTGAAAGCGC
JMFS162H09+ TTGTTAGAGTGATGACTTCTTGCTTACTGAATTTTGATTTTGGGAGTGAAAGCGCCTTCT
                      ____________________________________________________________
consensus TTGTTAGAGTGATGACTTCTTGCTTACTGAATTTTGATTTTGGGAGTGAAAGCGCCTTCT