| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS013H02 | Sequence | 636 | 003490 (10) | ref|XP_007014222.1| | 3e-58 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | |||||
| JMFS018B11 | Sequence | 588 | 003490 (10) | ref|XP_007014222.1| | 2e-52 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | |||||
| JMFS025F12 | Sequence | 600 | 003490 (10) | ref|XP_007014222.1| | 4e-47 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | |||||
| JMFS030D11 | Sequence | 576 | 003490 (10) | ref|XP_007014222.1| | 7e-51 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | |||||
| JMFS057D02 | Sequence | 623 | 003490 (10) | ref|XP_007014221.1| | 5e-64 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | |||||
| JMFS098D01 | Sequence | 596 | 003490 (10) | ref|XP_007014221.1| | 3e-52 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | |||||
| JMFS098E01 | Sequence | 613 | 003490 (10) | ref|XP_007014222.1| | 3e-52 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | |||||
| JMFS122H07 | Sequence | 574 | 003490 (10) | ref|XP_007014221.1| | 2e-52 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | |||||
| JMFS154F01 | Sequence | 605 | 003490 (10) | ref|XP_007014222.1| | 2e-52 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | |||||
| JMFS160G12 | Sequence | 602 | 003490 (10) | ref|XP_007014222.1| | 2e-52 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | |||||
This contig is upended
. : . : . : . : . : . :
JMFS057D02+ TGGAACA
____________________________________________________________
consensus TGGAACA
. : . : . : . : . : . :
JMFS057D02+ AGAATCGATGCTTCTTGTTCACTCCATCGACCATCTCTAAGCACCTTGGTCTTAGGTGCA
JMFS154F01+ TAGGTGCA
JMFS025F12+ TAGGTGCA
JMFS098E01+ TAGGTGCA
JMFS013H02+ TCCATCGACCATCTCTAAGCACCTTGGTCTTAGGTGCA
JMFS018B11+ CA
JMFS030D11+ CA
JMFS160G12+ GCA
____________________________________________________________
consensus AGAATCGATGCTTCTTGTTCACTCCATCGACCATCTCTAAGCACCTTGGTCTTAGGTGCA
. : . : . : . : . : . :
JMFS057D02+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
JMFS154F01+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
JMFS025F12+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
JMFS098E01+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
JMFS013H02+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
JMFS122H07+ AGCATTTCCAGCATTGTTCTCTTCAATACAACTGATG
JMFS098D01+ GTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
JMFS018B11+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
JMFS030D11+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAACNTGATG
JMFS160G12+ AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
____________________________________________________________
consensus AGTCCAGCCATAAGAGCTGCAGCAGCATTTCCAGCATTGTTCTCTTCAATAAAACTGATG
. : . : . : . : . : . :
JMFS057D02+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS154F01+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS025F12+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS098E01+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS013H02+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS122H07+ GTTGAGTTGATGGCAAGCAAGCTATCAATACCAGCAAAGTCTTGCCAATCTGGGGGTTTC
JMFS098D01+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS018B11+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS030D11+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
JMFS160G12+ GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
____________________________________________________________
consensus GTTGAGTTGATGACAAGCAAGCAAACAATACCAACAAAGTCTTGCCAATCTGGGGGTTTC
. : . : . : . : . : . :
JMFS057D02+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS154F01+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS025F12+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS098E01+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS013H02+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS122H07+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGGTGCAGCTTCCATAACCCATGAAAGT
JMFS098D01+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS018B11+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS030D11+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
JMFS160G12+ CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
____________________________________________________________
consensus CCATCACCATTTGCCAGCGCAATTGCCATAATAGCTGCAGCTTCCATAACCCATGAAAGT
. : . : . : . : . : . :
JMFS057D02+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS154F01+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS025F12+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCCTTTTTTTTCTTCCAATTT
JMFS098E01+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS013H02+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS122H07+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS098D01+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS018B11+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS030D11+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
JMFS160G12+ GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
____________________________________________________________
consensus GGATTCCACATAAAGCCAAGGAACTTCAGTACCTTGCTTTCC-TTTTTTTCTTCCAATTT
. : . : . : . : . : . :
JMFS057D02+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS154F01+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS025F12+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS098E01+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS013H02+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS122H07+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS098D01+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS018B11+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS030D11+ GTTGGGACCAAAAATTTGAAGCGTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
JMFS160G12+ GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
____________________________________________________________
consensus GTTGGGACCAAAAATTTGAAGCCTGTTGGCCCCTTCGGCTGATGTCAGACCCTCTCGAGT
. : . : . : . : . : . :
JMFS057D02+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS154F01+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS025F12+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS098E01+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS013H02+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS122H07+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS098D01+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS018B11+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS030D11+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
JMFS160G12+ ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
____________________________________________________________
consensus ACATTTCAGTTGCTCGAACACTTCCTCGATTGGGATTTTCTCCAGATCAACAGTCTCATT
. : . : . : . : . : . :
JMFS057D02+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS154F01+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS025F12+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS098E01+ CTTGATCT
JMFS013H02+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS122H07+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS098D01+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS018B11+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS030D11+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
JMFS160G12+ CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
____________________________________________________________
consensus CTTGATCTCTTCAAGGCTGAGAGACTTGTCTCCTCCCATTTTTGGTGATCAAAACAGCGC
. : . : . : . : . : . :
JMFS057D02+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS154F01+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS025F12+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS013H02+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS122H07+ AGAAGCGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS098D01+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS018B11+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS030D11+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
JMFS160G12+ AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
____________________________________________________________
consensus AGAAACGAATCCAAGCAAAAACTCTCTCTCTCTCTCTCTCTATATATATATATTTTAATT
. : . : . : . : . : . :
JMFS057D02+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS154F01+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS025F12+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS013H02+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS122H07+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS098D01+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS018B11+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS030D11+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
JMFS160G12+ TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
____________________________________________________________
consensus TTTTTTCTTGGGAAGAAAGCTAAAGGGAGAGGTGTTAGTGATTCATTGAAGGGAGAATTT
. : . : . : . : . : . :
JMFS057D02+ GTATCCCAGTAAGAGAC
JMFS154F01+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAGAAAAAGAGAAA
JMFS025F12+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAGAAAAA
JMFS013H02+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAGAAAAAGAGAAA
JMFS122H07+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAGAAAAAGAGAAA
JMFS098D01+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAGAAAAAGAGAAA
JMFS018B11+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAG
JMFS030D11+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGA
JMFS160G12+ GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAGAAAAAGAGAAATA
____________________________________________________________
consensus GTATCCCAGTAAGAGACTATACTAGACGGAAGAGAGAATTGAAGTAGAAAAAGAGAAATA