Contig 003489:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031O11Sequence486003489 (5)ref|XP_009623685.1|7e-54PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]798001138 (4)ref|XP_009623685.1|4e-19PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]
JMFS160C05Sequence584003489 (5)ref|XP_009623685.1|9e-74PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]
JMSF015L10Sequence584003489 (5)ref|XP_009623685.1|2e-73PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]776001138 (4)ref|XP_009623685.1|3e-19PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]
JMSF024O20Sequence666003489 (5)ref|XP_009623685.1|6e-89PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]777001138 (4)ref|XP_009623685.1|3e-19PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]
JMSF045N13Sequence829003489 (5)ref|XP_009623685.1|1e-126PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]741001138 (4)ref|XP_009623685.1|2e-19PREDICTED: cyclin-T1-5-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF045N13+                     AGAACCAGCAGCAATGTAGTGGGGCTTGTACTGTAAGCACAGTGTTGATC
                      ____________________________________________________________
consensus                       AGAACCAGCAGCAATGTAGTGGGGCTTGTACTGTAAGCACAGTGTTGATC
 
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JMSF045N13+           GAAGCCANTCATTCACAAAATTCCATGCAACTTTAGCAAGCTCCTTATGAGAGATTTCCA
                      ____________________________________________________________
consensus             GAAGCCANTCATTCACAAAATTCCATGCAACTTTAGCAAGCTCCTTATGAGAGATTTCCA
 
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JMSF024O20+                                                           GCTCATAAGCAA
JMSF045N13+           GCCTCTTTATAGCCGCAACAAGTGGCTTGTAAGGATGTTCGATATTGAGCTCATAAGCAA
                      ____________________________________________________________
consensus             GCCTCTTTATAGCCGCAACAAGTGGCTTGTAAGGATGTTCGATATTGAGCTCATAAGCAA
 
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JMSF024O20+           CAGTCGACAATAGAAGTCGCTCACCAGCTAAAACTAATTCTTTATGCTTATCATAAACTT
JMSF045N13+           CAGTCGACAATAGAAGTCGCTCACCAGCTAAAACTAATTCTTTATGCTTATCATAAACTT
                      ____________________________________________________________
consensus             CAGTCGACAATAGAAGTCGCTCACCAGCTAAAACTAATTCTTTATGCTTATCATAAACTT
 
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JMSF015L10+                           TTGTGGGGCAGAAGGATCCCATTNGTATATTAATTTGTATGAAA
JMSF024O20+           CCTTATCTCTGATTCTTTGTGGGGCAGAAGGATCCCATTTGTATATTAATTTGTATGAAA
JMSF045N13+           CCTTATCTCTGATTCTTTGTGGGGCAGAAGGATCCCATTTGTATATTAATTTGTATGAAA
JMFS160C05+                           TTGTGGGGCAGAAGGATCCCATTTGTATATTAATTTGTATGAAA
                      ____________________________________________________________
consensus             CCTTATCTCTGATTCTTTGTGGGGCAGAAGGATCCCATTTGTATATTAATTTGTATGAAA
 
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JMSF015L10+           CAACANCAAGATCTGAAAGCCAGCGCGGAGTTTCTTCTACTTTGCAGGCAAGGAACATGC
JMSF024O20+           CAACAACAAGATCTGAAAGCCAGCGCGGAGTTTCTTCTACTTTGCAGGCAAGGAACATGC
JMSF045N13+           CAACAACAAGATCTGAAAGCCAGCGCGGAGTTTCTTCTACTTTGCAGGCAAGGAACATGC
JMFF031O11+                                                 ACTTTGCAGGCAAGGAACATGC
JMFS160C05+           CAACAACAAGATCTGAAAGCCAGCGCGGAGTTTCTTCTACTTTGCAGGCAAGGAACATGC
                      ____________________________________________________________
consensus             CAACAACAAGATCTGAAAGCCAGCGCGGAGTTTCTTCTACTTTGCAGGCAAGGAACATGC
 
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JMSF015L10+           ACGCAGTAGCAATAATCTGCCAGTGATTCTTTGTATGAGATTGGCGCATATAAAACTGAT
JMSF024O20+           ACGCAGTAGCAATAATCTGCCAGTGATTCTTTGTATGAGATTGGCGCATATAAAACTGAT
JMSF045N13+           ACGCAGTAGCAATAATCTGCCAGTGATTCTTTGTATGAGATTGGCGCATATAAAACTGAT
JMFF031O11+           ACGCAGTAGCAATAATCTGCCAGTGATTCTTTGTATGAGATTGGCGCATATAAAACTGAT
JMFS160C05+           ACGCAGTAGCAATAATCTGCCAGTGATTCTTTGTATGAGATTGGCGCATATAAAACTGAT
                      ____________________________________________________________
consensus             ACGCAGTAGCAATAATCTGCCAGTGATTCTTTGTATGAGATTGGCGCATATAAAACTGAT
 
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JMSF015L10+           GACACAATAGCATTGCAGTTGCAATTGTCACTTGAGGCCCTTTAAGCTCTATCCCAAGCT
JMSF024O20+           GACACAATAGCATTGCAGTTGCAATTGTCACTTGAGGCCCTTTAAGCTCTATCCCAAGCT
JMSF045N13+           GACACAATAGCATTGCAGTTGCAATTGTCACTTGAGGCCCTTTAAGCTCTATCCCAAGCT
JMFF031O11+           GACACAATAGCATTGCAGTTGCAATTGTCACTTGAGGCCCTTTAAGCTCTATCCCAAGCT
JMFS160C05+           GACACAATAGCATTGCAGTTGCAATTGTCACTTGAGGCCCTTTAAGCTCTATCCCAAGCT
                      ____________________________________________________________
consensus             GACACAATAGCATTGCAGTTGCAATTGTCACTTGAGGCCCTTTAAGCTCTATCCCAAGCT
 
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JMSF015L10+           CTTGCAAGAATGAGCAGTACAGTTTCCGTAAACCTGATTCTTTCTCATAGTCAATGCCAT
JMSF024O20+           CTTGCAAGAATGAGCAGTACAGTTTCCGTAAACCTGATTCTTTCTCATAGTCAATGCCAT
JMSF045N13+           CTTGCAAGAATGAGCAGTACAGTTTCCGTAAACCTGATTCTTTCTCATAGTCAATGCCAT
JMFF031O11+           CTTGCAAGAATGAGCAGTACAGTTTCCGTAAACCTGATTCTTTCTCATAGTCAATGCCAT
JMFS160C05+           CTTGCAAGAATGAGCAGTACAGTTTCCGTAAACCTGATTCTTTCTCATAGTCAATGCCAT
                      ____________________________________________________________
consensus             CTTGCAAGAATGAGCAGTACAGTTTCCGTAAACCTGATTCTTTCTCATAGTCAATGCCAT
 
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JMSF015L10+           CCTTCCTTGATGGAGAATGGTTTTCAATTTCTTCTCTAGAGAAATACCATCTCCTCAAAC
JMSF024O20+           CCTTCCTTGATGGAGAATGGTTTTCAATTTCTTCTCTAGAGAAATACCATCTCCTCAAAC
JMSF045N13+           CCTTCCTTGATGGAGAATGGTTTTCAATTTCTTCTCTAGAGAAATACCATCTCCTCAAAC
JMFF031O11+           CCTTCCTTGATGGAGAATGGTTTTCAATTTCTTCTCTAGAGAAATACCATCTCCTCAAAC
JMFS160C05+           CCTTCCTTGATGGAGAATGGTTTTCAATTTCTTCTCTAGAGAAATACCATCTCCTCAAAC
                      ____________________________________________________________
consensus             CCTTCCTTGATGGAGAATGGTTTTCAATTTCTTCTCTAGAGAAATACCATCTCCTCAAAC
 
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JMSF015L10+           TTTGAGGGTCTTCTTGCAGGTACTTACTCAATGCAATACTTTGAGCTTTATGATGAGAAG
JMSF024O20+           TTTGAGGGTCTTCTTGCAGGTACTTACTCAATGCAATACTTTGAGCTTTATGATGAGAAG
JMSF045N13+           TTTGAGGGTCTTCTTGCAGGTACTTACTCAATGCAATACTTTGAGCTTTATGATGAGAAG
JMFF031O11+           TTTGAGGGTCTTCTTGCAGGTACTTACTCAATGCAATACTTTGAGCTTTATGATGAGAAG
JMFS160C05+           TTTGAGGGTCTTCTTGCAGGTACTTACTCAATGCAATACTTTGAGCTTTATGATGAGAAG
                      ____________________________________________________________
consensus             TTTGAGGGTCTTCTTGCAGGTACTTACTCAATGCAATACTTTGAGCTTTATGATGAGAAG
 
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JMSF015L10+           GATACCCAGGCAGTTGTCCTGCCATCACGTCCCTCGGTTCTCAGCAGCAAATAAATTTCT
JMSF024O20+           GATACCCAGGCAGTTGTCCTGCCATCACGTCCCTCGGTTCTCAGCAGCAAATAAATTTCT
JMSF045N13+           GATACCCAGGCAGTTGTCCTGCCATCACGTCCCTCGGTTCTCAGCAGCAAATAAATTTCT
JMFF031O11+           GATACCCAGGCAGTTGTCCTGCCATCACGTCCCTCGGTTCTCAGCAGCAAATAAATTTCT
JMFS160C05+           GATACCCAGGCAGTTGTCCTGCCATCACGTCCCTCGGTTCTCAGCAGCAAATAAATTTCT
                      ____________________________________________________________
consensus             GATACCCAGGCAGTTGTCCTGCCATCACGTCCCTCGGTTCTCAGCAGCAAATAAATTTCT
 
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JMSF015L10+           GATGTTTTGACAATCCCTCTGATAGCAAACACAGATGAATATTCTGAATCTGCGAAAGAT
JMSF024O20+           GATGTTTTGACAATCCCTCTGATAGCAAACACAGATGAATATTCTGAATCTGCGAAAGAT
JMSF045N13+           GATGTTTTGACAATCCCTCTGATAGCAAACACAGATGAATATTCTGAATCTGCGAAAGAT
JMFF031O11+           GATGTTTTGACAATCCCTCTGATAGCAAACACAGATGAATATTCTGAATCTGCGAAAGAT
JMFS160C05+           GATGTTTTGACAATCCCTCTGATAGCAAACACAGATGAATATTCTGAATCTGCGAAAGAT
                      ____________________________________________________________
consensus             GATGTTTTGACAATCCCTCTGATAGCAAACACAGATGAATATTCTGAATCTGCGAAAGAT
 
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JMSF015L10+           CTCCCTGCAAAAATTGTTCGAGCGACAGGAAGCAGCGTGACGATGCCCTTGT        
JMSF024O20+           CTCCCTGCAAAAATTGTTCGAGCGACAGGAAGCAGCGTGACGATGCCCTTGT        
JMSF045N13+           CTCCCTGCAAAAATTGTTCGAGCGACAGGAAGCAGCGTGACGATGCCCTTGT        
JMFF031O11+           CTCCCTGCAAAAATTGTTCGAGCGACAGGAAGCAGCGTGACGAT                
JMFS160C05+           CTCCCTGCAAAAATTGTTCGAGCGACAGGAAGCAGCGTGACGATGCCCTTGTCGTTCTGG
                      ____________________________________________________________
consensus             CTCCCTGCAAAAATTGTTCGAGCGACAGGAAGCAGCGTGACGATGCCCTTGTCGTTCTGG