Contig 003488:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018L03Sequence610003488 (3)ref|XP_006349508.1|4e-76PREDICTED: protein notum homolog [Solanum tuberosum]755016953ref|XP_004249600.1|1e-84PREDICTED: protein notum homolog [Solanum lycopersicum]
JMFS152D10Sequence617003488 (3)ref|XP_006349508.1|1e-99PREDICTED: protein notum homolog [Solanum tuberosum]
JMFS156G11Sequence626003488 (3)ref|XP_006349508.1|4e-102PREDICTED: protein notum homolog [Solanum tuberosum]

Alignment

This contig is upended


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JMFS156G11+                                             CAGACCTCCAGCAGAACATCCTGTAA
                      ____________________________________________________________
consensus                                               CAGACCTCCAGCAGAACATCCTGTAA
 
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JMFS156G11+           GAAAAGCTTTTTTAGCCTCGGAAAGTCCTATCGACAAGAATTCATCCATAAGTGCTTCCC
                      ____________________________________________________________
consensus             GAAAAGCTTTTTTAGCCTCGGAAAGTCCTATCGACAAGAATTCATCCATAAGTGCTTCCC
 
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JMFS152D10+                                                TTTAAGCTCACTCTCAGGATGCC
JMFF018L03+                                                TTTAAGCTCACTCTCAGGATGCC
JMFS156G11+           AGATAAGTTGTCCTCTGAAGAAGAGCTTTGTCCCATTTTTAAGCTCACTCTCAGGATGCC
                      ____________________________________________________________
consensus             AGATAAGTTGTCCTCTGAAGAAGAGCTTTGTCCCATTTTTAAGCTCACTCTCAGGATGCC
 
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JMFS152D10+           CAGCAAAAGATGCACCATCACAATATCGTATCTTCACTTTGTTCCAGTTGAAGAAATCTG
JMFF018L03+           CAGCAAAAGATGCACCATCACAATATCGTATCTTCACTTTGTTCCAGTTGAAGAAATCTG
JMFS156G11+           CAGCAAAAGATGCACCATCACAATATCGTATCTTCACTTTGTTCCAGTTGAAGAAATCTG
                      ____________________________________________________________
consensus             CAGCAAAAGATGCACCATCACAATATCGTATCTTCACTTTGTTCCAGTTGAAGAAATCTG
 
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JMFS152D10+           GATTTTGTGAAGGTTCGTGGCTCATAATCCCAGAAAACAAAACTTCATGTTCCATCATCA
JMFF018L03+           GATTTTGTGAAGGTTCGTGGCTCATAATCCCAGAAAACAAAACTTCATGTTCCATCATCA
JMFS156G11+           GATTTTGTGAAGGTTCGTGGCTCATAATCCCAGAAAACAAAACTTCATGTTCCATCATCA
                      ____________________________________________________________
consensus             GATTTTGTGAAGGTTCGTGGCTCATAATCCCAGAAAACAAAACTTCATGTTCCATCATCA
 
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JMFS152D10+           TTGAAGAACCTAATGCTCTTGTTGCCCTTGAAGAACATGATTCTATTGAATCACACCAAC
JMFF018L03+           TTGAAGAACCTAATGCTCTTGTTGCCCTTGAAGAACATGATTCTATTGAATCACACCAAC
JMFS156G11+           TTGAAGAACCTAATGCTCTTGTTGCCCTTGAAGAACATGATTCTATTGAATCACACCAAC
                      ____________________________________________________________
consensus             TTGAAGAACCTAATGCTCTTGTTGCCCTTGAAGAACATGATTCTATTGAATCACACCAAC
 
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JMFS152D10+           CTCCACCCTCAATGTGAAGAAGCCAATTATCAGACCCAGATCCAAAACCCTGCTGGAAAT
JMFF018L03+           CTCCACCCTCAATGTGAAGAAGCCAATTATCAGACCCAGATCCAAAACCCTGCTGGAAAT
JMFS156G11+           CTCCACCCTCAATGTGAAGAAGCCAATTATCAGACCCAGATCCAAAACCCTGCTGGAAAT
                      ____________________________________________________________
consensus             CTCCACCCTCAATGTGAAGAAGCCAATTATCAGACCCAGATCCAAAACCCTGCTGGAAAT
 
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JMFS152D10+           GATAACCCGGAACACTTCCATCCAAACAAAAGGCAGCTTTTTTGTGGGCATTGCTTAAAG
JMFF018L03+           GATAACCCGGAACACTTCCATCCAAACAAAAGGCAGCTTTTTTGTGGGCATTGCTTAAAG
JMFS156G11+           GATAACCCGGAACACTTCCATCCAAACAAAAGGCAGCTTTTTTGTGGGCATTGCTTAAAG
                      ____________________________________________________________
consensus             GATAACCCGGAACACTTCCATCCAAACAAAAGGCAGCTTTTTTGTGGGCATTGCTTAAAG
 
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JMFS152D10+           GAGTAAAGGGTACCACATGATTAGCAGGAAGACTGACGTATCTGCCACTGTGAGAGTGAG
JMFF018L03+           GAGTAAAGGGTACCACATGATTAGCAGGAAGACTGACGTATCTGCCACTGTGAGAGTGAG
JMFS156G11+           GAGTAAAGGGTACCACATGATTAGCAGGAAGACTGACGTATCTGCCACTGTGAGAGTGAG
                      ____________________________________________________________
consensus             GAGTAAAGGGTACCACATGATTAGCAGGAAGACTGACGTATCTGCCACTGTGAGAGTGAG
 
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JMFS152D10+           AGACGAAGGATACCGTGAGGATGACGGTGGCGAGCGCAGCAGAGAAGACTGCCCACTCTC
JMFF018L03+           AGACGAAGGATACCGTGAGGATGACGGTGGCGAGCGCAGCAGAGAAGACTGCCCACTCTC
JMFS156G11+           AGACGAAGGATACCGTGAGGATGACGGTGGCGAGCGCAGCAGAGAAGACTGCCCACTCTC
                      ____________________________________________________________
consensus             AGACGAAGGATACCGTGAGGATGACGGTGGCGAGCGCAGCAGAGAAGACTGCCCACTCTC
 
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JMFS152D10+           TTTTGGTCAATTTGCGCCACCACCTCACACCTCGGAGAAATCTATGATTCGCC       
JMFF018L03+           TTTTGGTCAATTTGCGCCACCACCTCACACCTCGGAGAAATCTATGATTCGCC       
JMFS156G11+           TTTTGGTCAATTTGCGCCACCACCTCACACCTCGGAGAAATCTATGATTCGCCATTGAAA
                      ____________________________________________________________
consensus             TTTTGGTCAATTTGCGCCACCACCTCACACCTCGGAGAAATCTATGATTCGCCATTGAAA