Contig 003486:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS156F07Sequence260003486 (2)ref|XP_010322765.1|3e-32PREDICTED: receptor-like protein kinase HAIKU2 [Solanum lycopersicum]
JMSF035C03Sequence682003486 (2)ref|XP_006353616.1|3e-77PREDICTED: receptor-like protein kinase HAIKU2-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF035C03+                                         GTAGTTCCAATAACTCACGATCAAGAAGCC
                      ____________________________________________________________
consensus                                           GTAGTTCCAATAACTCACGATCAAGAAGCC
 
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JMSF035C03+           GCCCAGAAGAGCGGTCGTGGCTAACAATGCAATGCTTAGCACCACCACTTTGCTCTTAAT
                      ____________________________________________________________
consensus             GCCCAGAAGAGCGGTCGTGGCTAACAATGCAATGCTTAGCACCACCACTTTGCTCTTAAT
 
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JMSF035C03+           GAGTTTATGCCGGACAGTGTGCCCACCGCAAACGCTTAACTCTGTGTTCACTTCACTTTT
                      ____________________________________________________________
consensus             GAGTTTATGCCGGACAGTGTGCCCACCGCAAACGCTTAACTCTGTGTTCACTTCACTTTT
 
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JMSF035C03+           GATACTGTGATCAATGCAGAGTCCTTTGTTACCGAGGAACGCCTTATCTCCCCCCATTAT
                      ____________________________________________________________
consensus             GATACTGTGATCAATGCAGAGTCCTTTGTTACCGAGGAACGCCTTATCTCCCCCCATTAT
 
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JMSF035C03+           CAAAAGATCATATGAAACTTCCCCGGAGAGTTGGTTGTCAGACAGATCGATCGATGAAAG
                      ____________________________________________________________
consensus             CAAAAGATCATATGAAACTTCCCCGGAGAGTTGGTTGTCAGACAGATCGATCGATGAAAG
 
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JMSF035C03+           CTTCAGGTTATCTAAGCTTCTTGGAATTGAGCCGGTGAGGTTGTTGTTTGAGAGATTCAA
                      ____________________________________________________________
consensus             CTTCAGGTTATCTAAGCTTCTTGGAATTGAGCCGGTGAGGTTGTTGTTTGAGAGATTCAA
 
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JMSF035C03+           GGAGTTCAACAGAGAGGGCATCGTTGTAATGGAATCGGGAATGCTACCACTTAGGTTATT
                      ____________________________________________________________
consensus             GGAGTTCAACAGAGAGGGCATCGTTGTAATGGAATCGGGAATGCTACCACTTAGGTTATT
 
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JMSF035C03+           CGAAGCAAGGTTCATATCCGCCAGCCTAGAGCAGTGCCCTAACTCTGCAGGTATTGATCC
JMFS156F07+                                                   AACTCTGCAGGTATTGATCC
                      ____________________________________________________________
consensus             CGAAGCAAGGTTCATATCCGCCAGCCTAGAGCAGTGCCCTAACTCTGCAGGTATTGATCC
 
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JMSF035C03+           CACGAACGCGTTTTTCTCCAAATGGAAAGATGACATTTGCTTTAACATACCAAGTTCAGA
JMFS156F07+           CACGAACGCGTTTTTCTCCAAATGGAAAGATGACATTTGCTTTAACATACCAAGTTCAGA
                      ____________________________________________________________
consensus             CACGAACGCGTTTTTCTCCAAATGGAAAGATGACATTTGCTTTAACATACCAAGTTCAGA
 
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JMSF035C03+           TGGTAACAACCCAAAGAAACGGTTATTGTCCAAGTAAAGCCTCTCCATAAGCAAGAGATT
JMFS156F07+           TGGTAACAACCCAAAGAAACGGTTATTGTCCAAGTAAAGCCTCTCCATAAGCAAGAGATT
                      ____________________________________________________________
consensus             TGGTAACAACCCAAAGAAACGGTTATTGTCCAAGTAAAGCCTCTCCATAAGCAAGAGATT
 
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JMSF035C03+           TCCAAGTTGTTTTGGGAGCTGACCCGAGAATTTGTTGTTTGCCAGAACTAACTGGTTCAA
JMFS156F07+           TCCAAGTTGTTTTGGGAGCTGACCCGAGAATTTGTTGTTTGACAGAACTAACTGGTTCAA
                      ____________________________________________________________
consensus             TCCAAGTTGTTTTGGGAGCTGACCCGAGAATTTGTTGTTTGCCAGAACTAACTGGTTCAA
 
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JMSF035C03+           GTTTGTGGCAGCCCCAATCCGGGGAGAAATACCTCCACTGAAACTGTTGCT         
JMFS156F07+           GTTTGTGGCAGCCCCAATCCGGGGAGAAATACCTCCACTGAAACTGTTGCTACTGAAATC
                      ____________________________________________________________
consensus             GTTTGTGGCAGCCCCAATCCGGGGAGAAATACCTCCACTGAAACTGTTGCTACTGAAATC