Contig 003481:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035A05Sequence585003481 (2)ref|XP_009787658.1|7e-17PREDICTED: uncharacterized protein LOC104235570 isoform X2 [Nicotiana sylvestri575008272 (6)ref|XP_006357754.1|2e-12PREDICTED: uncharacterized protein LOC102587194 isoform X2 [Solanum tuberosum]
JMFS150B10Sequence606003481 (2)ref|XP_009787657.1|3e-08PREDICTED: uncharacterized protein LOC104235570 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFF035A05+                                           AGAAGACGGCGGCGGAGTCACCGTAGTC
                      ____________________________________________________________
consensus                                             AGAAGACGGCGGCGGAGTCACCGTAGTC
 
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JMFF035A05+           CGGCAACGAAGACCGGACGTAGAAACCGGATGAGACTGCAAGCGCGGCGTAGAAGGATTA
JMFS150B10+                       CCGGACGTAGAAACCGGATGAGACTGCAAGCGCGGCGTAGAAGGATTA
                      ____________________________________________________________
consensus             CGGCAACGAAGACCGGACGTAGAAACCGGATGAGACTGCAAGCGCGGCGTAGAAGGATTA
 
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JMFF035A05+           GAAAAGAAAGCGAACTTGGAGGCGCCGAGCCTGGGACTAGGAAGCGTCGCAGTCTGTTGC
JMFS150B10+           GAAAAGAAAGCG-ACTTGGAGGCGCCGAGCCTGGGACTAGGAAGCGTCGCAGTCTGTTGC
                      ____________________________________________________________
consensus             GAAAAGAAAGCGAACTTGGAGGCGCCGAGCCTGGGACTAGGAAGCGTCGCAGTCTGTTGC
 
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JMFF035A05+           TCCTGCGGCGGCTTGTCCTTGGACGTGGCGGAGGAAGAGTCGCGATCTCTAGGGATCGAT
JMFS150B10+           TCCTGCGGCGGCTTGTCCTTGGACGTGGCGGAGGAAGAGTCGCGATCTCTAGGGATCGAT
                      ____________________________________________________________
consensus             TCCTGCGGCGGCTTGTCCTTGGACGTGGCGGAGGAAGAGTCGCGATCTCTAGGGATCGAT
 
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JMFF035A05+           GTACAAAAGGGTCGTCGCCATCCCAACACCATCGTGAATCTAAAATTCTGATTGCTGTAA
JMFS150B10+           GTACAAAAGGGTCGTCGCCATCCCAACACCATCGTGAATCTAAAATTCTGATTGCTGTAA
                      ____________________________________________________________
consensus             GTACAAAAGGGTCGTCGCCATCCCAACACCATCGTGAATCTAAAATTCTGATTGCTGTAA
 
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JMFF035A05+           GTAGAGAACGTGTATCACAGGTGGGGGGATGATAGAAGGAAGGAAACAGGGATTAAATTA
JMFS150B10+           GTAGAGAACGTGTATCACAGGTGGGGGGATGATAGAAGGAAGGAAACAGGGATTAAATTA
                      ____________________________________________________________
consensus             GTAGAGAACGTGTATCACAGGTGGGGGGATGATAGAAGGAAGGAAACAGGGATTAAATTA
 
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JMFF035A05+           TTCTTCTACGGAATTGGAAGCCAGCGGAGAAGACGAACACAACGACAAGAAACTGAAGGG
JMFS150B10+           TTCTTCTACGGAATTGGAAGCCAGCGGAGAAGACGAACACAACGACAAGAAACTGAAGGG
                      ____________________________________________________________
consensus             TTCTTCTACGGAATTGGAAGCCAGCGGAGAAGACGAACACAACGACAAGAAACTGAAGGG
 
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JMFF035A05+           AGGAAAAATCATTTACTCAGAAACGATGAACAAAGACAAAACAAAATCCACGAAAACCCG
JMFS150B10+           AGGAAAAATCATTTACTCAGAAACGATGAACAAAGACAAAACAAAATCCACGAAAACCCG
                      ____________________________________________________________
consensus             AGGAAAAATCATTTACTCAGAAACGATGAACAAAGACAAAACAAAATCCACGAAAACCCG
 
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JMFF035A05+           GGCACGGCTAGGCTAAGGCGATTCAATATATTTTTCCTAAAAAGATGGCTGCAAATAAAG
JMFS150B10+           GGCACGGCTAGGCTAAGGCGATTCAATATATTTTTCCTAAAAAGATGGCTGCAAATAAAG
                      ____________________________________________________________
consensus             GGCACGGCTAGGCTAAGGCGATTCAATATATTTTTCCTAAAAAGATGGCTGCAAATAAAG
 
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JMFF035A05+           GCTCTCTGAAATACGTAAAATGGCAGATATAATGCGCAGTCGCAGAGCATTGATATCTCA
JMFS150B10+           GCTCTCTGAAATACGTAAAATGGCAGATATAATGCGCAGTCGCAGAGCATTGATATCTCA
                      ____________________________________________________________
consensus             GCTCTCTGAAATACGTAAAATGGCAGATATAATGCGCAGTCGCAGAGCATTGATATCTCA
 
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JMFF035A05+           CTCTCACTGCACTCTGT                                           
JMFS150B10+           CTCTCACTGCACTCTGTGAAAAAGGCCTTATGGAAAGAAAGATGGGATATATATTTTATT
                      ____________________________________________________________
consensus             CTCTCACTGCACTCTGTGAAAAAGGCCTTATGGAAAGAAAGATGGGATATATATTTTATT