Contig 003479:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS032B07+                           CTGACATAAACATCCACTGGGGCTAAAGTGTTGCGCTCACCCTC
                      ____________________________________________________________
consensus                             CTGACATAAACATCCACTGGGGCTAAAGTGTTGCGCTCACCCTC
 
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JMFS032B07+           GCCATCGCGCTCGAACCGGAGAGAGAGGCGATCCAGATAGGTTTCGCGGTTGATTGGGGA
                      ____________________________________________________________
consensus             GCCATCGCGCTCGAACCGGAGAGAGAGGCGATCCAGATAGGTTTCGCGGTTGATTGGGGA
 
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JMFS032B07+           CCATTTGGGGAATTGATCGAGAATCCATGATAGGCCAAACCAGATTTCGCAGATCACAGA
                      ____________________________________________________________
consensus             CCATTTGGGGAATTGATCGAGAATCCATGATAGGCCAAACCAGATTTCGCAGATCACAGA
 
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JMFS032B07+           GATGAGCCATAAAGGGAAAGCATCGTAGGCGGGGGTTAATATGCGGAAGTGGAAGAAGAA
                      ____________________________________________________________
consensus             GATGAGCCATAAAGGGAAAGCATCGTAGGCGGGGGTTAATATGCGGAAGTGGAAGAAGAA
 
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JMFS032B07+           ACAGAGAATGATTAGCCGGAAAACAATGACGATCCTGTATGGACTGATGAGGCTTGATGA
                      ____________________________________________________________
consensus             ACAGAGAATGATTAGCCGGAAAACAATGACGATCCTGTATGGACTGATGAGGCTTGATGA
 
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JMFS032B07+           AATTGGGAGTTTTCTCCACAGTGGCTGCCTAGCATCCGCCATGAGAAAGTCGTCATCTTC
JMFS147A11+                                                                     TC
                      ____________________________________________________________
consensus             AATTGGGAGTTTTCTCCACAGTGGCTGCCTAGCATCCGCCATGAGAAAGTCGTCATCTTC
 
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JMFS032B07+           ATTATCGGCGCCGCCTTTATCATCATCAAACCTGGTGACCAGCCCTCTCTTTTCTTGCCT
JMFS147A11+           ATTATCGGCGCCGCCTTTATCATCATCAAACCTGGTGACCAGCCCTCTCTTTTCTTGCCT
                      ____________________________________________________________
consensus             ATTATCGGCGCCGCCTTTATCATCATCAAACCTGGTGACCAGCCCTCTCTTTTCTTGCCT
 
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JMFS032B07+           GGTTTTCCATTTCTCAACCCTGTCTTTCCATTCCGCGTTACTGAAAACCTCCTTCTGCTC
JMFS147A11+           GGTTTTCCATTTCTCAACCCTGTCTTTCCATTCCGCGTTACTGAAAACCTCCTTCTGCTC
                      ____________________________________________________________
consensus             GGTTTTCCATTTCTCAACCCTGTCTTTCCATTCCGCGTTACTGAAAACCTCCTTCTGCTC
 
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JMFS032B07+           ATCTTCCAAATCCTTTCCACCCACGCTTCCTGGTGCTGCAGTGGGTT             
JMFS147A11+           ATCTTCCAAATCCTTTCCACCCACGCTTCCTGGTGCTGCAGTGGGTTGAAAAGCGGCAGA
                      ____________________________________________________________
consensus             ATCTTCCAAATCCTTTCCACCCACGCTTCCTGGTGCTGCAGTGGGTTGAAAAGCGGCAGA
 
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JMFS147A11+           ATTTGTAGTATTGTGATGCGGCAGCTGATTGTTATGGTAGTCTCCATTCTCCGATAGGGG
                      ____________________________________________________________
consensus             ATTTGTAGTATTGTGATGCGGCAGCTGATTGTTATGGTAGTCTCCATTCTCCGATAGGGG
 
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JMFS147A11+           GGGGTGGTTCTTGGTCTCAAACTCTTGCTCAAAATCTTCGCCCTCAAAATGATCTTCATC
                      ____________________________________________________________
consensus             GGGGTGGTTCTTGGTCTCAAACTCTTGCTCAAAATCTTCGCCCTCAAAATGATCTTCATC
 
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JMFS147A11+           GTCCCCCACAACTCTAGGACAGCCTTTGTGACGCTTATAACGAGTATTGCAGTGAGGGCA
                      ____________________________________________________________
consensus             GTCCCCCACAACTCTAGGACAGCCTTTGTGACGCTTATAACGAGTATTGCAGTGAGGGCA
 
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JMSF041C12+                                            ACAAGGNTTNCAAANTGGGAAACCACA
JMFS045C07+                                            ACAAGGCTTACAAACTGGGAAACCACA
JMFS147A11+           GCATTGATTGCCTTCGCTCCTCTCATACTGATAACAAGGCTTACAAACTGGGAAACCACA
                      ____________________________________________________________
consensus             GCATTGATTGCCTTCGCTCCTCTCATACTGATAACAAGGCTTACAAACTGGGAAACCACA
 
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JMSF041C12+           CTCCNTACACGCCACAAACACTTCACCATTCTCCACCACCCCTATCTCGTCTCTGCATAT
JMFS045C07+           CTCCCTACACGCCACAAACATTTCACCATTCTCCACCACCCTTATCTTGTCTCTGCATAT
JMFS147A11+           CTCCCTACACGCCACAAACACTTCACCATTCTCCACCACCCCTATCTCGTCTCTGCATAT
                      ____________________________________________________________
consensus             CTCCCTACACGCCACAAACACTTCACCATTCTCCACCACCCCTATCTCGTCTCTGCATAT
 
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JMSF041C12+           CCGGCACATCTTCTGACTCTCTCTCTCTACCTCTCGCCGCTCATCGTGGTCGGCAGCATG
JMFS045C07+           CCGGCACATATTATGACTCTCTCTCTGTACCTCTCGCCGCACATAGTGGTCGGCAGCATG
JMFS147A11+           CCGGCACATCTTCTGACTCTCTCTCTCTACCTCTCGCCGCTCATCGTGGTCGGCAGCATG
                      ____________________________________________________________
consensus             CCGGCACATCTTCTGACTCTCTCTCTCTACCTCTCGCCGCTCATCGTGGTCGGCAGCATG
 
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JMSF041C12+           CAAATGAGAACCGCCGGTGAAGAGAGCAGCCATGGCGTAGTGT                 
JMFS045C07+           CAAATGAGAACCGCCGGT                                          
JMFS147A11+           CAAATGAGAACCGCCGGTGAAGAGAGCAGCCATGGCGTAGTGTGACTAAGGAAGTGAAGA
                      ____________________________________________________________
consensus             CAAATGAGAACCGCCGGTGAAGAGAGCAGCCATGGCGTAGTGTGACTAAGGAAGTGAAGA