| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031I03 | Sequence | 110 | 003475 (7) | ||||||||
| JMFS107E05 | Sequence | 627 | 003475 (7) | ref|XP_009605676.1| | 4e-84 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA | |||||
| JMFS137D08 | Sequence | 531 | 003475 (7) | ref|XP_009605676.1| | 2e-32 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA | |||||
| JMSF001E12 | Sequence | 402 | 009139 (10) | ref|XP_009771232.1| | 5e-16 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA | 761 | 003475 (7) | ref|XP_009605676.1| | 2e-79 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA |
| JMSF001P01 | Sequence | 377 | 009139 (10) | ref|XP_009771232.1| | 6e-13 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA | 747 | 003475 (7) | ref|XP_009605676.1| | 2e-79 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA |
| JMSF010L21 | Sequence | 247 | 019928 | ref|XP_011099433.1| | 2e-46 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA | 723 | 003475 (7) | ref|XP_002531999.1| | 2e-72 | Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis] gb|EEF3 |
| JMSF023F14 | Sequence | 637 | 009139 (10) | ref|XP_011073654.1| | 7e-44 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA | 780 | 003475 (7) | ref|XP_009605676.1| | 1e-107 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BA |
This contig is upended
. : . : . : . : . : . :
rJMSF023F14+ TGGACTCGAACTATGAAG
____________________________________________________________
consensus TGGACTCGAACTATGAAG
. : . : . : . : . : . :
rJMSF023F14+ CTCATGTTGCTGATTTCGGACTTGCCAAGTTCTTGCAGGATTNTGGAACATCAGAATGCA
rJMSF010L21+ ATTCTGGAACATCAGAATGCA
____________________________________________________________
consensus CTCATGTTGCTGATTTCGGACTTGCCAAGTTCTTGCAGGATTCTGGAACATCAGAATGCA
. : . : . : . : . : . :
JMFS107E05- GGATACATTGCACCAGAGTATGCCTATACACTGAAGG
rJMSF023F14+ TGTCTGCTATTGCAGGTTCTTATGGATACATTGCACCAGAGTATGCCTATACACTGAAGG
rJMSF010L21+ TGTCTGCTATTGCAGGTTCTTATGGATACATTGCACCAGAGTATGCCTATACACTGAAGG
rJMSF001P01+ AGAGTATGCCTATACACTGAAGG
rJMSF001E12+ AGAGTATGCCTATACACTGAAGG
____________________________________________________________
consensus TGTCTGCTATTGCAGGTTCTTATGGATACATTGCACCAGAGTATGCCTATACACTGAAGG
. : . : . : . : . : . :
JMFS107E05- TAGATGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTGCTGCTAGAACTGATAAGCGGAA
rJMSF023F14+ TAGATGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTGCTGCTAGAACTGATAAGCGGAA
rJMSF010L21+ TAGATGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTGCTGCTAGAACTGATAAGCGGAA
rJMSF001P01+ TAGATGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTGCTGCTAGAACTGATAAGCGGAA
rJMSF001E12+ TAGATGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTGCTGCTAGAACTGATAAGCGGAA
____________________________________________________________
consensus TAGATGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTGCTGCTAGAACTGATAAGCGGAA
. : . : . : . : . : . :
JMFS107E05- AGAAGCCAGTTGGGGAGTTTGGTGATGGTGTCGACATAGTCCAATGGGTTAGAAAAATCA
rJMSF023F14+ AGAAGCCAGTTGGGGAGTTTGGTGATGGTGTCGACATAGTCCAATGGGTTAGAAAAATCA
rJMSF010L21+ AGAAGCCAGTTGGGGAGTTTGGTGATGGTGTCGACATAGTCCAATGGGTTAGAAAAATCA
rJMSF001P01+ AGAAGCCAGTTGGGGAGTTTGGTGATGGTGTCGACATAGTCCAATGGGTTAGAAAAATCA
rJMSF001E12+ AGAAGCCAGTTGGGGAGTTTGGTGATGGTGTCGACATAGTCCAATGGGTTAGAAAAATCA
____________________________________________________________
consensus AGAAGCCAGTTGGGGAGTTTGGTGATGGTGTCGACATAGTCCAATGGGTTAGAAAAATCA
. : . : . : . : . : . :
JMFS107E05- CAGATGGGAAAAAGGAAGCAGTGCTCAAGATTCTCGATCCGAGGCTCTCGACTGTCCCCC
rJMSF023F14+ CAGATGGGAAAAAGGAAGCAGTGCTCAAGATTCTCGATCCGAGGCTCTCGACTGTCCCCC
rJMSF010L21+ CAGATGGGAAAAAGGAAGCAGTGCTCAAGATTCTCGATCCGAGGCTCTCGACTGTCCCCC
rJMSF001P01+ CAGATGGGAAAAAGGAAGCAGTGCTCAAGATTCTCGATCCGAGGCTCTCGACTGTCCCCC
rJMSF001E12+ CAGATGGGAAAAAGGAAGCAGTGCTCAAGATTCTCGATCCGAGGCTCTCGACTGTCCCCC
____________________________________________________________
consensus CAGATGGGAAAAAGGAAGCAGTGCTCAAGATTCTCGATCCGAGGCTCTCGACTGTCCCCC
. : . : . : . : . : . :
JMFS107E05- TTCACGAGGCAATGCACGTGTTCTATGTAGCAATGTTGTGTGTGGAAGAACAGGCGGTGG
rJMSF023F14+ TTCACGAGGCAATGCACGTGTTCTATGTAGCAATGTTGTGTGTGGAAGAACAGGCGGTGG
rJMSF010L21+ TTCACGAGGCAATGCACGTGTTCTATGTAGCAATGTTGTG-CTGGAAGAACAGGCGGTGG
rJMSF001P01+ TTCACGAGGCAATGCACGTGTTCTATGTAGCAATGTTGTGTGTGGAAGAACAGGCGGTGG
rJMSF001E12+ TTCACGAGGCAATGCACGTGTTCTATGTAGCAATGTTGTGTGTGGAAGAACAGGCGGTGG
JMFS137D08+ GGCAATGCACGTGTTCTATGTAGCAATGTTGTGTGTGGAAGAACAGGCGGTGG
____________________________________________________________
consensus TTCACGAGGCAATGCACGTGTTCTATGTAGCAATGTTGTGTGTGGAAGAACAGGCGGTGG
. : . : . : . : . : . :
JMFS107E05- AGCGCCCAAAGATGCGCGAGGTGGTGCAAATGCTAACAGAGCTGCCCAAACCACCAAACA
rJMSF023F14+ AGCGCCCAAAGATGCGCGAGGTGGTGCAAATGCTAACAGAGCTGCCCAAACCACCAAACA
rJMSF010L21+ AGCGCCCAAAGATGCGCGAGGTGGTGCAAATGCTAACAGAGCTGCCCAAACCACCAAACA
rJMSF001P01+ AGCGCCCAAAGATGCGCGAGGTGGTGCAAATGCTAACAGAGCTGCCCAAACCACCAAACA
rJMSF001E12+ AGCGCCCAAAGATGCGCGAGGTGGTGCAAATGCTAACAGAGCTGCCCAAACCACCAAACA
JMFS137D08+ AGCGCCCAAAGATGCGCGAGGTGGTGCAAATGCTAACAGAGCTGCCCAAACCACCAAACA
____________________________________________________________
consensus AGCGCCCAAAGATGCGCGAGGTGGTGCAAATGCTAACAGAGCTGCCCAAACCACCAAACA
. : . : . : . : . : . :
JMFS107E05- ACAAACAGGATGACTCAACAGTCACAGAGTCCCCTCCACCATCAGCCTCTGTACTGGAGT
rJMSF023F14+ ACAAACAGGATGACTCAACAGTCACAGAGTCCCCTCCACCATCAGCCTCTGTACTGGAGT
rJMSF010L21+ ACAAACAGGATGACTCAACAGTCACAGAGTCCCCTCCACCATCAGCCTCTGTACTGGAGT
rJMSF001P01+ ACAAACAGGATGACTCAACAGTCACAGAGTCCCCTCCACCATCAGCCTCTGTACTGGAGT
rJMSF001E12+ ACAAACAGGATGACTCAACAGTCACAGAGTCCCCTCCACCATCAGCCTCTGTACTGGAGT
JMFS137D08+ ACAAACAGGATGACTCAACAGTCACAGAGTCCCCTCCACCATCAGCCTCTGTACTGGAGT
____________________________________________________________
consensus ACAAACAGGATGACTCAACAGTCACAGAGTCCCCTCCACCATCAGCCTCTGTACTGGAGT
. : . : . : . : . : . :
JMFS107E05- CCCCCAGCACAACTCCAAGGGACCTGAAAGACCAAATGCAGGCACCACCTCAGTCACCAC
rJMSF023F14+ CCCCCAGCACAACTCCAAGGGACCTGAAAGACCAAATGCAGGCACCACCTCAGTCACCAC
rJMSF010L21+ CCCCCAGCACAACTCCAAGGGACCTGAAAGACCAAATGCAGGCACCACCTCAGTCACCAC
rJMSF001P01+ CCCCCAGCACAACTCCAAGGGACCTGAAAGACCAAATGCAGGCACCACCTCAGTCACCAC
rJMSF001E12+ CCCCCAGCACAACTCCAAGGGACCTGAAAGACCAAATGCAGGCACCACCTCAGTCACCAC
JMFS137D08+ CCCCCAGCACAACTCCAAGGGACCTGAAAGACCAAATGCAGGCACCACCTCAGTCACCAC
____________________________________________________________
consensus CCCCCAGCACAACTCCAAGGGACCTGAAAGACCAAATGCAGGCACCACCTCAGTCACCAC
. : . : . : . : . : . :
JMFS107E05- CACCTGATCTTCTCAGCATCTAAAATCCGAGTATGGAACCCTATGTTCACTTATCTCTAG
rJMSF023F14+ CACCTGATCTTCTCAGCATCTAAAATCCGAGTATGGAACCCTATGTTCACTTATCTCTAG
rJMSF010L21+ CACCTGATCTTCTCAGCATCTAAAATCCGAGTATGGAACCCTATGTTCACTTATCTCTAG
rJMSF001P01+ CACCTGATCTTCTCAGCATCTAAAATCCGAGTATGGAACCCTATGTTCACTTATCTCTAG
rJMSF001E12+ CACCTGATCTTCTCAGCATCTAAAATCCGAGTATGGAACCCTATGTTCACTTATCTCTAG
JMFS137D08+ CACCTGATCTTCTCAGCATCTAAAATCCGAGTATGGAACCCTATGTTCACTTATCTCTAG
____________________________________________________________
consensus CACCTGATCTTCTCAGCATCTAAAATCCGAGTATGGAACCCTATGTTCACTTATCTCTAG
. : . : . : . : . : . :
JMFS107E05- TTACCCTATCAGTTTGCTGCTTCTATTTTTGGTTTCCTTTTTTATTTTATTTTATTTTTA
rJMSF023F14+ TTACCCTATCAGTTTGCTGCTTCTATTTTTGTTTTCCTTTTTTATTTTATTTTATTTTTA
rJMSF010L21+ TTACCCTATCAGTTTGCTGCTTCTATTTTTGTTTTCCTTTTTTATTTTATTTTATTTTTA
rJMSF001P01+ TTACCCTATCAGTTTGCTGCTTCTATTTTTGTTTTCCTTTTTTATTTTATTTTATTTTTA
rJMSF001E12+ TTACCCTATCAGTTTGCTGCTTCTATTTTTGTTTTCCTTTTTTATTTTATTTTATTTTTA
rJMFF031I03+ TATTTTATTTTTA
JMFS137D08+ TTACCCTATCAGTTTGCTGCTTCTATTTTTGTTTTCCTTTTTTATTTTATTTTATTTTTA
____________________________________________________________
consensus TTACCCTATCAGTTTGCTGCTTCTATTTTTGTTTTCCTTTTTTATTTTATTTTATTTTTA
. : . : . : . : . : . :
JMFS107E05- TTAGNAGTTGTTATTGG
rJMSF023F14+ TTAGTAGTTGTTATTGGGGGAAGGGTTTGCTTAACTATCT--AGCTTCAAGGTGCTCACT
rJMSF010L21+ TTAGTAGTTGTTATTGGGGGAAGGGTTTGCTTAACTATCT--AACTTCAAGGTGCTCACT
rJMSF001P01+ TTAGTAGTTGTTATTGGGGGAAGGGTTTGCTTAACTATCT--AACTTCAAGGTGCTCACT
rJMSF001E12+ TTAGTAGTTGTTATTGGGGGAAGGGTTTGCTTAACTATCT--AACTTCAAGGTGCTCACT
rJMFF031I03+ TTAGTAGTTGCTATTGGGGGAAGGGTTTGCTTAACTATCGTAACTTACAAGGTGCTCACT
JMFS137D08+ TTAGTAGTTGTTATTGGGGGAAGGGTTTGCTTAACTATCT--AACTTCAAGGTGCTCACT
____________________________________________________________
consensus TTAGTAGTTGTTATTGGGGGAAGGGTTTGCTTAACTATCT--AACTTCAAGGTGCTCACT
. : . : . : . : . : . :
rJMSF023F14+ GTTCCAAGCTTTGCTTTTTGTGTAATATGTAC
rJMSF010L21+ GTTCCAAGCTTTGCTTTTTGTGTAATATGTAC
rJMSF001P01+ GTTCCAAGCTTTGCTTTTCGTGTAATATGTACAGT
rJMSF001E12+ GTTCCAAGCTTTGCTTTTTGTGTAATATGTACAGT
rJMFF031I03+ GTTCCAAGCTTTGCTTTTTGTGTAATATGTACA
JMFS137D08+ GTTCCAAGCTTTGCTTTTTGTGTAATATGTACAGTTGGATTGGAGTTGTAAAATTGGTAG
____________________________________________________________
consensus GTTCCAAGCTTTGCTTTTTGTGTAATATGTACAGTTGGATTGGAGTTGTAAAATTGGTAG
. : . : . : . : . : . :
JMFS137D08+ TAGTAAGAATCTCCTCTTTTCCTGTTCAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC
____________________________________________________________
consensus TAGTAAGAATCTCCTCTTTTCCTGTTCAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC